BLASTX nr result

ID: Bupleurum21_contig00005785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005785
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531170.1| carbon catabolite repressor protein, putativ...   325   4e-87
ref|XP_002280990.1| PREDICTED: carbon catabolite repressor prote...   325   5e-87
emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]   325   5e-87
ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|1...   322   3e-86
ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|2...   316   2e-84

>ref|XP_002531170.1| carbon catabolite repressor protein, putative [Ricinus communis]
           gi|223529240|gb|EEF31213.1| carbon catabolite repressor
           protein, putative [Ricinus communis]
          Length = 603

 Score =  325 bits (833), Expect = 4e-87
 Identities = 158/214 (73%), Positives = 177/214 (82%), Gaps = 6/214 (2%)
 Frame = +3

Query: 3   KSYHCSSKCFLDAWQXXXXXXXXXXXXXNDNGNEEEELFGRFSGTGSGNL------AQSN 164
           KSYHCS+KCF DAWQ             ++NGN+EEE+FGRF+ TGSG L      + S 
Sbjct: 89  KSYHCSTKCFSDAWQHHRVLHDRAASAVSENGNDEEEVFGRFNSTGSGVLNTSLSSSAST 148

Query: 165 SSLSNGTSPLYPAAVSQRHGSETWFEVGYGKTYTPTADDIGHVLKFECVVVDAETKLPSG 344
           +SL+NG++PLYPAAV+QR G ETWFEVG  KTYTP+ADDIGHVLKFECVVVDAE+KLP G
Sbjct: 149 ASLTNGSAPLYPAAVAQRSGGETWFEVGRSKTYTPSADDIGHVLKFECVVVDAESKLPVG 208

Query: 345 SANTILTSRVIPAPSPTPRRLISVSGVDVTGHLDLDGRLSSTGTFTVLSYNILADAYATN 524
             NTILTSRVIPAPSPTPRRLI VSG+DV GHLD DGR+SS+GTFTVLSYNIL+D YAT+
Sbjct: 209 HPNTILTSRVIPAPSPTPRRLIPVSGIDVMGHLDSDGRISSSGTFTVLSYNILSDVYATS 268

Query: 525 ELYSYCPSWALSWPYRRQNLLREIVGYCADIVCL 626
           E YSYCPSWALSWPYRRQNLLREIVGY ADIVCL
Sbjct: 269 ETYSYCPSWALSWPYRRQNLLREIVGYRADIVCL 302


>ref|XP_002280990.1| PREDICTED: carbon catabolite repressor protein 4 homolog 1 [Vitis
           vinifera] gi|297739794|emb|CBI29976.3| unnamed protein
           product [Vitis vinifera]
          Length = 603

 Score =  325 bits (832), Expect = 5e-87
 Identities = 158/214 (73%), Positives = 176/214 (82%), Gaps = 6/214 (2%)
 Frame = +3

Query: 3   KSYHCSSKCFLDAWQXXXXXXXXXXXXXNDNGNEEEELFGRFSGTGSGNL------AQSN 164
           KSYHCS KCF DAWQ             N+NGNEEEELFGRF+ TGSG++      + S+
Sbjct: 89  KSYHCSPKCFSDAWQHHRVLHDRAASAVNENGNEEEELFGRFNSTGSGSINTSLAPSASS 148

Query: 165 SSLSNGTSPLYPAAVSQRHGSETWFEVGYGKTYTPTADDIGHVLKFECVVVDAETKLPSG 344
           +SL+NG++PLYPAAV+QR G ETWFEVG  KTYTPTADDIGHVLKFECVVVDAETKL  G
Sbjct: 149 ASLANGSAPLYPAAVTQRSGGETWFEVGRSKTYTPTADDIGHVLKFECVVVDAETKLTVG 208

Query: 345 SANTILTSRVIPAPSPTPRRLISVSGVDVTGHLDLDGRLSSTGTFTVLSYNILADAYATN 524
             + ILTSRVIPAPSPTPR LISVSGVD+ GHLD DGR+SS GTFTVLSYNIL+D +AT+
Sbjct: 209 HGSNILTSRVIPAPSPTPRHLISVSGVDMVGHLDSDGRISSAGTFTVLSYNILSDVFATS 268

Query: 525 ELYSYCPSWALSWPYRRQNLLREIVGYCADIVCL 626
           ELYSYCPSWALSWPYR+QNLLREIVGY ADIVCL
Sbjct: 269 ELYSYCPSWALSWPYRKQNLLREIVGYRADIVCL 302


>emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]
          Length = 603

 Score =  325 bits (832), Expect = 5e-87
 Identities = 158/214 (73%), Positives = 176/214 (82%), Gaps = 6/214 (2%)
 Frame = +3

Query: 3   KSYHCSSKCFLDAWQXXXXXXXXXXXXXNDNGNEEEELFGRFSGTGSGNL------AQSN 164
           KSYHCS KCF DAWQ             N+NGNEEEELFGRF+ TGSG++      + S+
Sbjct: 89  KSYHCSPKCFSDAWQHHRVLHDRAASAVNENGNEEEELFGRFNSTGSGSINTSLAPSASS 148

Query: 165 SSLSNGTSPLYPAAVSQRHGSETWFEVGYGKTYTPTADDIGHVLKFECVVVDAETKLPSG 344
           +SL+NG++PLYPAAV+QR G ETWFEVG  KTYTPTADDIGHVLKFECVVVDAETKL  G
Sbjct: 149 ASLANGSAPLYPAAVTQRSGGETWFEVGRSKTYTPTADDIGHVLKFECVVVDAETKLTVG 208

Query: 345 SANTILTSRVIPAPSPTPRRLISVSGVDVTGHLDLDGRLSSTGTFTVLSYNILADAYATN 524
             + ILTSRVIPAPSPTPR LISVSGVD+ GHLD DGR+SS GTFTVLSYNIL+D +AT+
Sbjct: 209 HGSNILTSRVIPAPSPTPRHLISVSGVDMVGHLDSDGRISSAGTFTVLSYNILSDVFATS 268

Query: 525 ELYSYCPSWALSWPYRRQNLLREIVGYCADIVCL 626
           ELYSYCPSWALSWPYR+QNLLREIVGY ADIVCL
Sbjct: 269 ELYSYCPSWALSWPYRKQNLLREIVGYRADIVCL 302


>ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|118486421|gb|ABK95050.1|
           unknown [Populus trichocarpa]
           gi|222867975|gb|EEF05106.1| predicted protein [Populus
           trichocarpa]
          Length = 603

 Score =  322 bits (826), Expect = 3e-86
 Identities = 157/214 (73%), Positives = 176/214 (82%), Gaps = 6/214 (2%)
 Frame = +3

Query: 3   KSYHCSSKCFLDAWQXXXXXXXXXXXXXNDNGNEEEELFGRFSGTGSGNL------AQSN 164
           KSYHCS KCF DAWQ             N+NGNEEEELFGRF+ +GSG +      + S+
Sbjct: 89  KSYHCSPKCFSDAWQHHRVLHDRAASAINENGNEEEELFGRFNSSGSGVMNTSLSGSASS 148

Query: 165 SSLSNGTSPLYPAAVSQRHGSETWFEVGYGKTYTPTADDIGHVLKFECVVVDAETKLPSG 344
           +SL+NG++PLYPAAV+QR G ETWFEVG  KTYTP+ADDIGHVLKFECVVVDAETKLP G
Sbjct: 149 ASLTNGSTPLYPAAVTQRSGGETWFEVGRSKTYTPSADDIGHVLKFECVVVDAETKLPVG 208

Query: 345 SANTILTSRVIPAPSPTPRRLISVSGVDVTGHLDLDGRLSSTGTFTVLSYNILADAYATN 524
            +NT+LTSRVIPAPSPTPRRLISVSG+D    LD DGR+SS+GTFTVLSYNIL+D YATN
Sbjct: 209 HSNTLLTSRVIPAPSPTPRRLISVSGLDAMAPLDSDGRISSSGTFTVLSYNILSDVYATN 268

Query: 525 ELYSYCPSWALSWPYRRQNLLREIVGYCADIVCL 626
           + YSYCPSWALSWPYRRQNLLREIVGY ADIVCL
Sbjct: 269 DTYSYCPSWALSWPYRRQNLLREIVGYRADIVCL 302


>ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|222854327|gb|EEE91874.1|
           predicted protein [Populus trichocarpa]
          Length = 602

 Score =  316 bits (810), Expect = 2e-84
 Identities = 158/214 (73%), Positives = 174/214 (81%), Gaps = 6/214 (2%)
 Frame = +3

Query: 3   KSYHCSSKCFLDAWQXXXXXXXXXXXXXNDNGNEEEELFGRFSGTGSGNL------AQSN 164
           KSYHCS KCF DAWQ             N+NGNEEEELFGR++ +GSG L      + S+
Sbjct: 89  KSYHCSPKCFSDAWQHHRVLHDRAASAVNENGNEEEELFGRYNSSGSGVLNTSLSGSASS 148

Query: 165 SSLSNGTSPLYPAAVSQRHGSETWFEVGYGKTYTPTADDIGHVLKFECVVVDAETKLPSG 344
           +SL+NG++PLYPAAV+QR G ETWFEVG  K YTP+ADDIGHVLKFECVVVDAETKLP G
Sbjct: 149 ASLTNGSTPLYPAAVTQRSG-ETWFEVGRSKIYTPSADDIGHVLKFECVVVDAETKLPVG 207

Query: 345 SANTILTSRVIPAPSPTPRRLISVSGVDVTGHLDLDGRLSSTGTFTVLSYNILADAYATN 524
             NT+LTSRVIPAPSPTPRRLI VSG+D    LDLDGR+SSTGTFTVLSYNIL+D YATN
Sbjct: 208 HPNTLLTSRVIPAPSPTPRRLIPVSGLDAMVPLDLDGRISSTGTFTVLSYNILSDVYATN 267

Query: 525 ELYSYCPSWALSWPYRRQNLLREIVGYCADIVCL 626
           E YSYCPSWALSWPYRRQNLLREIVGY ADIVCL
Sbjct: 268 ETYSYCPSWALSWPYRRQNLLREIVGYRADIVCL 301


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