BLASTX nr result

ID: Bupleurum21_contig00005771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005771
         (864 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521877.1| zinc finger protein, putative [Ricinus commu...    81   3e-13
ref|XP_002521878.1| nucleic acid binding protein, putative [Rici...    79   2e-12
ref|XP_003555867.1| PREDICTED: zinc finger protein MAGPIE-like [...    76   1e-11
ref|XP_003536713.1| PREDICTED: zinc finger protein MAGPIE-like [...    74   3e-11
ref|XP_002314745.1| predicted protein [Populus trichocarpa] gi|2...    74   3e-11

>ref|XP_002521877.1| zinc finger protein, putative [Ricinus communis]
           gi|223538915|gb|EEF40513.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 571

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 62/140 (44%), Positives = 74/140 (52%), Gaps = 25/140 (17%)
 Frame = -3

Query: 862 FSRRDSFITHRAFCDALAQESARHPPGLGS-----FGNNHHMMNMNLSQI---------- 728
           FSRRDSFITHRAFCDALAQESARHP GL +     +GNNH  M++ LSQ+          
Sbjct: 191 FSRRDSFITHRAFCDALAQESARHPTGLNTIGSHLYGNNH--MSLGLSQVGSPISSLQDQ 248

Query: 727 --SSNSLLRLGT--TAKLEQFTXXXXXXXSLFTAQQHPHSMSLSSP------FFMAQDHS 578
             SS++LLRLG+   AK E                  P S S S P      FFM+  + 
Sbjct: 249 NHSSSNLLRLGSAGAAKFEHII---------------PPSNSTSLPTMPASAFFMSDANQ 293

Query: 577 NQYQEMHSKPFHDHGLMQLP 518
             +    +KP   HGLMQLP
Sbjct: 294 GSFS---NKPL--HGLMQLP 308



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
 Frame = -2

Query: 389 SSYLMNDHSFNNANASGGQGTNIFPGNSHNQ--GLVSSLYXXXXXXXNQASPHMSATALL 216
           +S  ++ + FN  N  GGQG+ IF  N  +     + SLY          +PHMSATALL
Sbjct: 355 NSGFLSPNPFNGGN--GGQGSTIFANNMGDPVGSGIPSLYSNSMQQE-NITPHMSATALL 411

Query: 215 QKAAQMGSITSNTSASTFFKGFGSNTSLSSMNGANNKFAARNFSENIENNQL 60
           QKAAQMGS TS+ + ST  +G GS++S  + +   +   + NF  +  N ++
Sbjct: 412 QKAAQMGSTTSSNNNSTLLRGLGSSSSTGNKSD-RSPLVSANFGSSFGNAKI 462


>ref|XP_002521878.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538916|gb|EEF40514.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 589

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 53/134 (39%), Positives = 73/134 (54%), Gaps = 21/134 (15%)
 Frame = -3

Query: 862 FSRRDSFITHRAFCDALAQESARHPP-GLGSFGNNHH---MMNMNLSQIS---------S 722
           FSRRDSFITHRAFCDALAQESAR+PP  L + G++ +    M++ LSQ++         S
Sbjct: 183 FSRRDSFITHRAFCDALAQESARNPPTNLNTIGSHLYGGSNMSLGLSQVNTQISSMQDQS 242

Query: 721 NSLLRLGTTAKLEQFTXXXXXXXSLFTAQQHPHSMSLSSPFFMAQDHSNQYQEMH----- 557
           + +LRLG  ++  QF            + +      + SP F  Q+ +  Y + H     
Sbjct: 243 SDILRLGGGSRTGQFDHLLPSSMGGSVSFRPSPPQPMPSPAFFMQEPNQNYHDEHQAQQG 302

Query: 556 ---SKPFHDHGLMQ 524
              +KPFH HGLMQ
Sbjct: 303 LLQNKPFH-HGLMQ 315



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 52/117 (44%), Positives = 68/117 (58%), Gaps = 7/117 (5%)
 Frame = -2

Query: 395 SSSSYLM-NDHSFNNANASGGQGTNIFP----GNSH--NQGLVSSLYXXXXXXXNQASPH 237
           S++S LM N  S  N  + GG G+ +F     G+ H  N G V SL+       N   PH
Sbjct: 356 SNNSLLMSNQFSNQNGASGGGDGSTMFSNHIMGDHHQMNSG-VPSLFTSSVQKDNTV-PH 413

Query: 236 MSATALLQKAAQMGSITSNTSASTFFKGFGSNTSLSSMNGANNKFAARNFSENIENN 66
           MSATALLQKAAQMGS TS+T +++  + FGS++S + M  A   F    FSEN +NN
Sbjct: 414 MSATALLQKAAQMGS-TSSTYSASLLRSFGSSSSSTGMKSAAANF-GEIFSENDQNN 468


>ref|XP_003555867.1| PREDICTED: zinc finger protein MAGPIE-like [Glycine max]
          Length = 567

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 56/134 (41%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
 Frame = -3

Query: 862 FSRRDSFITHRAFCDALAQESARHPPGLGSFGNNHHM------MNMNLSQISS------- 722
           FSRRDSFITHRAFCDALAQESAR PP L   G   H+      M +NLSQ+ S       
Sbjct: 182 FSRRDSFITHRAFCDALAQESARQPPSLSGGGIGSHLYGSTTNMALNLSQVGSQISTMQD 241

Query: 721 -----NSLLRLG-TTAKLEQFTXXXXXXXSLFTAQQHPHSMSLSSPFFMAQDHSNQYQEM 560
                  LLRLG  + +  QF             QQ         PFFM+ + +  Y   
Sbjct: 242 PNAQPTELLRLGAASGRTGQFDHILGSPFRPSNQQQQ------QQPFFMSSEPNQTYHHP 295

Query: 559 -HSKPFHDHGLMQL 521
             +KPF   GLMQL
Sbjct: 296 DQNKPF-QQGLMQL 308



 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 48/129 (37%), Positives = 63/129 (48%), Gaps = 14/129 (10%)
 Frame = -2

Query: 395 SSSSYLMNDHSFNNANASGGQGTNIFPGNSHNQGL-----VSSLYXXXXXXXNQASPHMS 231
           ++S+   ++H FNNAN  GG   N    N++N+G       S+           A  HMS
Sbjct: 331 NTSNASFSEH-FNNANGGGGNNNN----NNNNEGTNYFATSSAPSLFSNSVNASALSHMS 385

Query: 230 ATALLQKAAQMGSITSNTSASTFFKGFGSNTSLSS------MNGAN---NKFAARNFSEN 78
           ATALLQKAAQMG+ TSN   ++  K FGS +S S       +N AN     F   N    
Sbjct: 386 ATALLQKAAQMGATTSNGGTASLLKSFGSASSSSGGGGSKLVNAANYVSGMFGGNNHVNE 445

Query: 77  IENNQLQGL 51
             N+ LQ L
Sbjct: 446 QSNSNLQDL 454


>ref|XP_003536713.1| PREDICTED: zinc finger protein MAGPIE-like [Glycine max]
          Length = 571

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 55/131 (41%), Positives = 64/131 (48%), Gaps = 18/131 (13%)
 Frame = -3

Query: 862 FSRRDSFITHRAFCDALAQESARHPPGLGSFGNNHHM------MNMNLSQISS------- 722
           FSRRDSFITHRAFCDALAQESAR PP L   G   H+      M +NLSQ+ S       
Sbjct: 183 FSRRDSFITHRAFCDALAQESARQPPSLSGGGIGSHLYGSTTNMALNLSQVGSQIQDPSN 242

Query: 721 ---NSLLRLG-TTAKLEQFTXXXXXXXSLFTAQQHPHSMSLSSPFFMAQDHSNQYQEM-H 557
                LLRLG T+ +   F             QQ         PFFM++  +  Y     
Sbjct: 243 AQPTELLRLGATSGRTGHFDHILGSPFRPSNQQQ--------QPFFMSEQPNQTYHHPDQ 294

Query: 556 SKPFHDHGLMQ 524
           +KPF   GLMQ
Sbjct: 295 NKPF-QQGLMQ 304



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 45/121 (37%), Positives = 54/121 (44%), Gaps = 17/121 (14%)
 Frame = -2

Query: 362 FNNANASGGQGTNIFPGNSHNQGLVSSLYXXXXXXXNQASPHMSATALLQKAAQMGSITS 183
           FNNAN  G    N    N        SL+         A  HMSATALLQKAAQMG+ +S
Sbjct: 337 FNNANGGGNNNNNNEGTNYFATSSAPSLFSNSANANANALSHMSATALLQKAAQMGATSS 396

Query: 182 NTSASTFFKGFGSNTSLSS--------------MNGAN---NKFAARNFSENIENNQLQG 54
           N +AS   K FGS +S S               +N AN     F   + +E   N+ LQ 
Sbjct: 397 NGTAS-LLKSFGSASSSSGGGSKSEQQHRVPPLVNAANYVGGMFGGNHVNEQQSNSNLQD 455

Query: 53  L 51
           L
Sbjct: 456 L 456


>ref|XP_002314745.1| predicted protein [Populus trichocarpa] gi|222863785|gb|EEF00916.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 55/136 (40%), Positives = 67/136 (49%), Gaps = 21/136 (15%)
 Frame = -3

Query: 862 FSRRDSFITHRAFCDALAQESARHPPGLGS-----FGNNHHMMNMNLSQI---------- 728
           FSRRDSFITHRAFCDALAQESARHP  L +     +GNNH  M++  SQ+          
Sbjct: 165 FSRRDSFITHRAFCDALAQESARHPTSLNTIGSHLYGNNH--MSLGFSQVGSQISHLQDH 222

Query: 727 --SSNSLLRLGT--TAKLEQFTXXXXXXXSLFTAQQHPHSMSLSSP--FFMAQDHSNQYQ 566
             S N++LRLG+   A  E                 +P SM +  P  FFM   +   + 
Sbjct: 223 HPSGNNMLRLGSAGAANFEH-----------LIPPPNPPSMPMMPPSGFFMGDANQGPFP 271

Query: 565 EMHSKPFHDHGLMQLP 518
                    HGLMQLP
Sbjct: 272 NKSL-----HGLMQLP 282



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
 Frame = -2

Query: 392 SSSYLMNDHSFNNANASGGQGTNIFPGNSHNQ--GLVSSLYXXXXXXXNQASPHMSATAL 219
           +S  L+N   FNN N +G Q T++FP N      G   S +          +PH+SATAL
Sbjct: 328 ASPGLLNATQFNNVNGAG-QRTSVFPTNMSGDHVGSAMSSFFNTSMQQENITPHVSATAL 386

Query: 218 LQKAAQMGSITSNTSASTFFKGFGSNTSLSSMN-------GANNKFAARNFSENIE---- 72
           LQKAAQMGS TS+ S S   +  GS+++  + +          + F+  N  E++E    
Sbjct: 387 LQKAAQMGSTTSSNSPSGLLRSLGSSSTTGAKSIRPLVSTNFGSSFSNANVGESLETHME 446

Query: 71  -NNQLQGL 51
             +QLQGL
Sbjct: 447 SESQLQGL 454


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