BLASTX nr result

ID: Bupleurum21_contig00005719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005719
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95860.1| unknown [Populus trichocarpa]                          181   3e-43
ref|XP_002298225.1| predicted protein [Populus trichocarpa] gi|2...   179   1e-42
ref|XP_002284539.1| PREDICTED: thylakoid membrane phosphoprotein...   175   2e-41
ref|XP_002516019.1| Thylakoid membrane phosphoprotein 14 kDa, ch...   174   4e-41
ref|XP_002303292.1| predicted protein [Populus trichocarpa] gi|2...   167   3e-39

>gb|ABK95860.1| unknown [Populus trichocarpa]
          Length = 146

 Score =  181 bits (458), Expect = 3e-43
 Identities = 92/144 (63%), Positives = 112/144 (77%)
 Frame = +3

Query: 129 MASTITCLTLPPLFVNDRQTLFRPLMKFPPSLINAEKQGRIAFAAKATGDSSESSTSLGL 308
           MAS    L  PPL V+ ++  FR L K P S I  E+Q  +A A KATG+SSESSTSL +
Sbjct: 1   MASIYANLPSPPLLVHSKRIPFRTLQKLPLSTIK-ERQNCVAVAVKATGESSESSTSLSI 59

Query: 309 VESVQNIWDNSEDRVAIVGLGFAGVVALWASANLITAIDKLPLIPGVLEFVGILFSSWFV 488
           V+SVQNIWD+SEDR+ +VGLGFA +VA+WASAN+ITA+DKLP++P  LEFVGIL+SSWFV
Sbjct: 60  VKSVQNIWDDSEDRLPLVGLGFAALVAVWASANVITAVDKLPVVPSALEFVGILYSSWFV 119

Query: 489 YRYLLFKPDRQELGQAINKKVSDI 560
           YRYLL KP+R+EL Q I K V DI
Sbjct: 120 YRYLLLKPNREELFQIIKKSVGDI 143


>ref|XP_002298225.1| predicted protein [Populus trichocarpa] gi|222845483|gb|EEE83030.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  179 bits (453), Expect = 1e-42
 Identities = 91/144 (63%), Positives = 111/144 (77%)
 Frame = +3

Query: 129 MASTITCLTLPPLFVNDRQTLFRPLMKFPPSLINAEKQGRIAFAAKATGDSSESSTSLGL 308
           MAS    L  PPL V+ ++  FR L K P S I  E+Q  +A   KATG+SSESSTSL +
Sbjct: 1   MASIYANLPSPPLLVHGKRIPFRTLQKLPLSTIK-ERQNCVAVVVKATGESSESSTSLSI 59

Query: 309 VESVQNIWDNSEDRVAIVGLGFAGVVALWASANLITAIDKLPLIPGVLEFVGILFSSWFV 488
           V+SVQNIWD+SEDR+ +VGLGFA +VA+WASAN+ITA+DKLP++P  LEFVGIL+SSWFV
Sbjct: 60  VKSVQNIWDDSEDRLPLVGLGFAALVAVWASANVITAVDKLPVVPSALEFVGILYSSWFV 119

Query: 489 YRYLLFKPDRQELGQAINKKVSDI 560
           YRYLL KP+R+EL Q I K V DI
Sbjct: 120 YRYLLLKPNREELFQIIKKSVGDI 143


>ref|XP_002284539.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa, chloroplastic
           isoform 2 [Vitis vinifera]
           gi|225442617|ref|XP_002284537.1| PREDICTED: thylakoid
           membrane phosphoprotein 14 kDa, chloroplastic isoform 1
           [Vitis vinifera] gi|297743263|emb|CBI36130.3| unnamed
           protein product [Vitis vinifera]
          Length = 146

 Score =  175 bits (443), Expect = 2e-41
 Identities = 87/144 (60%), Positives = 111/144 (77%)
 Frame = +3

Query: 129 MASTITCLTLPPLFVNDRQTLFRPLMKFPPSLINAEKQGRIAFAAKATGDSSESSTSLGL 308
           MA ++     PPL V+ R+ L R L  FP S IN  +Q  ++  AKATG+SSESST+L +
Sbjct: 1   MAYSVLASLPPPLLVHRREALVRALNGFPVS-INRGRQSSLSVVAKATGESSESSTTLSI 59

Query: 309 VESVQNIWDNSEDRVAIVGLGFAGVVALWASANLITAIDKLPLIPGVLEFVGILFSSWFV 488
           V+SVQN+W + EDR A+ GLGFA +VA+WASANLITAID LPLIPGV EF+GIL+S WF+
Sbjct: 60  VKSVQNVWGDPEDRFALFGLGFAAIVAVWASANLITAIDNLPLIPGVFEFIGILYSWWFI 119

Query: 489 YRYLLFKPDRQELGQAINKKVSDI 560
           YRYLLFKP+R+EL + INK VS++
Sbjct: 120 YRYLLFKPNREELFEIINKSVSEV 143


>ref|XP_002516019.1| Thylakoid membrane phosphoprotein 14 kDa, chloroplast precursor,
           putative [Ricinus communis] gi|223544924|gb|EEF46439.1|
           Thylakoid membrane phosphoprotein 14 kDa, chloroplast
           precursor, putative [Ricinus communis]
          Length = 146

 Score =  174 bits (440), Expect = 4e-41
 Identities = 89/144 (61%), Positives = 108/144 (75%)
 Frame = +3

Query: 129 MASTITCLTLPPLFVNDRQTLFRPLMKFPPSLINAEKQGRIAFAAKATGDSSESSTSLGL 308
           MAS +  L  P L V  R TLFR   K P   +  E Q R+A   KA G+SSESS+SL +
Sbjct: 1   MASIVANLPAPALLVPSRTTLFRTPQKGPVFPLK-ETQNRVAVVMKAAGESSESSSSLSI 59

Query: 309 VESVQNIWDNSEDRVAIVGLGFAGVVALWASANLITAIDKLPLIPGVLEFVGILFSSWFV 488
           V+SV+N+WD+SEDR AI GLGFA +V +WASANL++A+DKLPLIP VLE +GIL+SSWF+
Sbjct: 60  VKSVKNVWDSSEDRWAIGGLGFAAIVGVWASANLVSAVDKLPLIPSVLELIGILYSSWFI 119

Query: 489 YRYLLFKPDRQELGQAINKKVSDI 560
           YRYLLFKPDR+EL Q INK VS I
Sbjct: 120 YRYLLFKPDREELFQIINKSVSSI 143


>ref|XP_002303292.1| predicted protein [Populus trichocarpa] gi|222840724|gb|EEE78271.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  167 bits (424), Expect = 3e-39
 Identities = 84/144 (58%), Positives = 109/144 (75%)
 Frame = +3

Query: 129 MASTITCLTLPPLFVNDRQTLFRPLMKFPPSLINAEKQGRIAFAAKATGDSSESSTSLGL 308
           MAS    L  PPL V+ ++TL   L   P S I  ++Q  ++   +ATG+SSESS  LG+
Sbjct: 1   MASITASLPSPPLLVHGKRTLSSTLQTLPLSPIK-DRQNCVSVVVRATGESSESSAPLGI 59

Query: 309 VESVQNIWDNSEDRVAIVGLGFAGVVALWASANLITAIDKLPLIPGVLEFVGILFSSWFV 488
           V+SV+NIWD+SEDR+A+VGLGFA +VA+W SA LI AIDKLP++P VLE +GILFSSWF+
Sbjct: 60  VKSVKNIWDDSEDRLALVGLGFAALVAIWTSAKLILAIDKLPVVPSVLELIGILFSSWFI 119

Query: 489 YRYLLFKPDRQELGQAINKKVSDI 560
           YRYLLFKP+R+EL Q I K V++I
Sbjct: 120 YRYLLFKPNREELFQIIKKSVANI 143


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