BLASTX nr result

ID: Bupleurum21_contig00005717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005717
         (1652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267516.1| PREDICTED: histone deacetylase 14 [Vitis vin...   487   e-135
ref|XP_002516301.1| Histone deacetylase, putative [Ricinus commu...   479   e-133
ref|XP_002307035.1| histone deacetylase [Populus trichocarpa] gi...   471   e-130
ref|XP_004163043.1| PREDICTED: histone deacetylase 14-like [Cucu...   467   e-129
ref|XP_004148663.1| PREDICTED: histone deacetylase 14-like [Cucu...   467   e-129

>ref|XP_002267516.1| PREDICTED: histone deacetylase 14 [Vitis vinifera]
            gi|296088531|emb|CBI37522.3| unnamed protein product
            [Vitis vinifera]
          Length = 437

 Score =  487 bits (1254), Expect = e-135
 Identities = 234/265 (88%), Positives = 253/265 (95%)
 Frame = -2

Query: 1084 SEQGLIFIEGSGPTYATATTFQESLVAAGAGISLVDSVVAASRIGKDPPTGFALIRPPGH 905
            S++G+I+I+GSGPTYATATTFQESL+AAGAGI+LVDSVVAAS+  +DPP GFALIRPPGH
Sbjct: 156  SQKGIIYIDGSGPTYATATTFQESLLAAGAGITLVDSVVAASKSSQDPPMGFALIRPPGH 215

Query: 904  HAVPKGPMGFCVFGNVAVAARYAQRFYGLKRVFIIDFDVHHGNGTNDAFYDDPDVFFLST 725
            HA+PKGPMGFCVFGNVA+AARYAQR +GLKRVFIIDFDVHHGNGTNDAFYDDPD+FFLST
Sbjct: 216  HAIPKGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLST 275

Query: 724  HQDGSYPGTGKIDQIGNLNGEGATLNLPLPGGSGDIAMRTVFDEVIVPCAQRFKPDIILV 545
            HQDGSYPGTGKID++G+ +GEGATLNLPLPGGSGDIAMRTVFDEVIVP AQRFKPDIILV
Sbjct: 276  HQDGSYPGTGKIDEVGHGSGEGATLNLPLPGGSGDIAMRTVFDEVIVPSAQRFKPDIILV 335

Query: 544  SAGYDAHVLDPLASLQFTTSTYYMLASNIKQLAKDLCEGRCIFFLEGGYNLDSLSNSVAD 365
            SAGYD HVLDPLASLQFTT TYYMLASNIKQLAKDLC GRC+FFLEGGYNL SLS SVAD
Sbjct: 336  SAGYDGHVLDPLASLQFTTGTYYMLASNIKQLAKDLCGGRCVFFLEGGYNLSSLSYSVAD 395

Query: 364  SFLAFLGEPSLASKFDDPAILYEEP 290
            SF AFLGEPSLAS+FDDPAILYEEP
Sbjct: 396  SFRAFLGEPSLASEFDDPAILYEEP 420


>ref|XP_002516301.1| Histone deacetylase, putative [Ricinus communis]
            gi|223544531|gb|EEF46048.1| Histone deacetylase, putative
            [Ricinus communis]
          Length = 425

 Score =  479 bits (1233), Expect = e-133
 Identities = 232/278 (83%), Positives = 256/278 (92%)
 Frame = -2

Query: 1084 SEQGLIFIEGSGPTYATATTFQESLVAAGAGISLVDSVVAASRIGKDPPTGFALIRPPGH 905
            S++G+IFI+G+GPTYATATTFQESL+AAGAG++LVDSVVAAS   ++PPTGFALIRPPGH
Sbjct: 144  SQEGIIFIDGTGPTYATATTFQESLMAAGAGLALVDSVVAASNNSQNPPTGFALIRPPGH 203

Query: 904  HAVPKGPMGFCVFGNVAVAARYAQRFYGLKRVFIIDFDVHHGNGTNDAFYDDPDVFFLST 725
            HA+PKGPMGFCVFGNVA+AAR+AQR +GLKRVFIIDFDVHHGNGTNDAFYDDPD+FFLST
Sbjct: 204  HAIPKGPMGFCVFGNVAIAARHAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLST 263

Query: 724  HQDGSYPGTGKIDQIGNLNGEGATLNLPLPGGSGDIAMRTVFDEVIVPCAQRFKPDIILV 545
            HQDGSYPGTGKID++G  +GEG TLNLPLPGGSGD+AMRTVFDEVIVPCAQRFKPDIILV
Sbjct: 264  HQDGSYPGTGKIDEVGQGDGEGTTLNLPLPGGSGDVAMRTVFDEVIVPCAQRFKPDIILV 323

Query: 544  SAGYDAHVLDPLASLQFTTSTYYMLASNIKQLAKDLCEGRCIFFLEGGYNLDSLSNSVAD 365
            SAGYD HVLDPLASLQFTT T+YMLASNI QLAKD+C GRCIFFLEGGYNLDSLS SVAD
Sbjct: 324  SAGYDGHVLDPLASLQFTTGTFYMLASNITQLAKDMCGGRCIFFLEGGYNLDSLSYSVAD 383

Query: 364  SFLAFLGEPSLASKFDDPAILYEEPCQSTHIAAVKAAI 251
            SF AFLGE SLAS+FD+PAILYEEP     +  VK AI
Sbjct: 384  SFRAFLGETSLASEFDNPAILYEEP-----LTRVKQAI 416


>ref|XP_002307035.1| histone deacetylase [Populus trichocarpa] gi|222856484|gb|EEE94031.1|
            histone deacetylase [Populus trichocarpa]
          Length = 390

 Score =  471 bits (1213), Expect = e-130
 Identities = 226/265 (85%), Positives = 249/265 (93%)
 Frame = -2

Query: 1084 SEQGLIFIEGSGPTYATATTFQESLVAAGAGISLVDSVVAASRIGKDPPTGFALIRPPGH 905
            SEQG+I+I+GSGPTYATATTF+ESLVAAGAG++LVDSVVAAS   ++PPTGFALIRPPGH
Sbjct: 109  SEQGIIYIDGSGPTYATATTFRESLVAAGAGLTLVDSVVAASNCSQNPPTGFALIRPPGH 168

Query: 904  HAVPKGPMGFCVFGNVAVAARYAQRFYGLKRVFIIDFDVHHGNGTNDAFYDDPDVFFLST 725
            HA+PKGPMGFCVFGNVA+AAR+AQ  +GLKRVFIIDFDVHHGNGTNDAF+DDPD++FLST
Sbjct: 169  HAIPKGPMGFCVFGNVAIAARHAQLVHGLKRVFIIDFDVHHGNGTNDAFFDDPDIYFLST 228

Query: 724  HQDGSYPGTGKIDQIGNLNGEGATLNLPLPGGSGDIAMRTVFDEVIVPCAQRFKPDIILV 545
            HQDGSYPGTGKID+IG+ +GEG TLNLPLPGGSGDI+MRTVFDEVIVP AQRFKPDIILV
Sbjct: 229  HQDGSYPGTGKIDEIGHGDGEGTTLNLPLPGGSGDISMRTVFDEVIVPSAQRFKPDIILV 288

Query: 544  SAGYDAHVLDPLASLQFTTSTYYMLASNIKQLAKDLCEGRCIFFLEGGYNLDSLSNSVAD 365
            SAGYDAHVLDPL SLQFTT TYY LASNIK+LAKDLC GRC+FFLEGGYNLDSLS SV D
Sbjct: 289  SAGYDAHVLDPLGSLQFTTGTYYTLASNIKELAKDLCGGRCVFFLEGGYNLDSLSYSVTD 348

Query: 364  SFLAFLGEPSLASKFDDPAILYEEP 290
            SF AFLGE SLAS+FD+PAILYEEP
Sbjct: 349  SFRAFLGEKSLASEFDNPAILYEEP 373


>ref|XP_004163043.1| PREDICTED: histone deacetylase 14-like [Cucumis sativus]
          Length = 442

 Score =  467 bits (1202), Expect = e-129
 Identities = 227/265 (85%), Positives = 244/265 (92%)
 Frame = -2

Query: 1084 SEQGLIFIEGSGPTYATATTFQESLVAAGAGISLVDSVVAASRIGKDPPTGFALIRPPGH 905
            S  GLI IEGSGPTYATATTF ESLVAAGAGISLVDSVV AS+  K+PP GFALIRPPGH
Sbjct: 161  SRDGLILIEGSGPTYATATTFNESLVAAGAGISLVDSVVKASQTHKNPPIGFALIRPPGH 220

Query: 904  HAVPKGPMGFCVFGNVAVAARYAQRFYGLKRVFIIDFDVHHGNGTNDAFYDDPDVFFLST 725
            HAVPKGPMGFCVFGNVA+AARYAQR +GLKRVFIIDFD HHGNGT+DAFYDD D+FFLST
Sbjct: 221  HAVPKGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLST 280

Query: 724  HQDGSYPGTGKIDQIGNLNGEGATLNLPLPGGSGDIAMRTVFDEVIVPCAQRFKPDIILV 545
            HQDGSYPGTGKID++G  +GEG TLN+PLPGGSGD AM+ VFDEVIVPCAQRFKPDIILV
Sbjct: 281  HQDGSYPGTGKIDEVGCGDGEGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILV 340

Query: 544  SAGYDAHVLDPLASLQFTTSTYYMLASNIKQLAKDLCEGRCIFFLEGGYNLDSLSNSVAD 365
            SAGYDAHVLDPLA+LQFTT TYYMLASNIKQLAK+LC GRCIFFLEGGYNL+SLS SVAD
Sbjct: 341  SAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCGGRCIFFLEGGYNLESLSYSVAD 400

Query: 364  SFLAFLGEPSLASKFDDPAILYEEP 290
            SF AFL EPS+AS+FD+PAILYEEP
Sbjct: 401  SFRAFLDEPSMASEFDNPAILYEEP 425


>ref|XP_004148663.1| PREDICTED: histone deacetylase 14-like [Cucumis sativus]
          Length = 442

 Score =  467 bits (1202), Expect = e-129
 Identities = 227/265 (85%), Positives = 244/265 (92%)
 Frame = -2

Query: 1084 SEQGLIFIEGSGPTYATATTFQESLVAAGAGISLVDSVVAASRIGKDPPTGFALIRPPGH 905
            S  GLI IEGSGPTYATATTF ESLVAAGAGISLVDSVV AS+  K+PP GFALIRPPGH
Sbjct: 161  SRDGLILIEGSGPTYATATTFNESLVAAGAGISLVDSVVKASQTHKNPPIGFALIRPPGH 220

Query: 904  HAVPKGPMGFCVFGNVAVAARYAQRFYGLKRVFIIDFDVHHGNGTNDAFYDDPDVFFLST 725
            HAVPKGPMGFCVFGNVA+AARYAQR +GLKRVFIIDFD HHGNGT+DAFYDD D+FFLST
Sbjct: 221  HAVPKGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLST 280

Query: 724  HQDGSYPGTGKIDQIGNLNGEGATLNLPLPGGSGDIAMRTVFDEVIVPCAQRFKPDIILV 545
            HQDGSYPGTGKID++G  +GEG TLN+PLPGGSGD AM+ VFDEVIVPCAQRFKPDIILV
Sbjct: 281  HQDGSYPGTGKIDEVGCGDGEGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILV 340

Query: 544  SAGYDAHVLDPLASLQFTTSTYYMLASNIKQLAKDLCEGRCIFFLEGGYNLDSLSNSVAD 365
            SAGYDAHVLDPLA+LQFTT TYYMLASNIKQLAK+LC GRCIFFLEGGYNL+SLS SVAD
Sbjct: 341  SAGYDAHVLDPLANLQFTTGTYYMLASNIKQLAKELCGGRCIFFLEGGYNLESLSYSVAD 400

Query: 364  SFLAFLGEPSLASKFDDPAILYEEP 290
            SF AFL EPS+AS+FD+PAILYEEP
Sbjct: 401  SFRAFLDEPSMASEFDNPAILYEEP 425


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