BLASTX nr result

ID: Bupleurum21_contig00005715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005715
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521630.1| F-box and wd40 domain protein, putative [Ric...   287   1e-75
ref|XP_003545182.1| PREDICTED: F-box/WD-40 repeat-containing pro...   282   3e-74
ref|XP_003519479.1| PREDICTED: F-box/WD-40 repeat-containing pro...   279   4e-73
ref|XP_003617076.1| F-box/WD-40 repeat-containing protein [Medic...   279   4e-73
ref|XP_002312850.1| predicted protein [Populus trichocarpa] gi|2...   279   4e-73

>ref|XP_002521630.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223539142|gb|EEF40737.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 541

 Score =  287 bits (735), Expect = 1e-75
 Identities = 142/188 (75%), Positives = 158/188 (84%)
 Frame = -1

Query: 574 NSVLTTSRRSITDLPPALVSEILNCLDPKELGIVSCVSTSLYAVAAEHHVWKEFYCERWG 395
           N VL   RRSITDLPPAL+SEILNCLDPKELGIVSCVST    +A+E+ VW+E YCERWG
Sbjct: 55  NEVLPNFRRSITDLPPALISEILNCLDPKELGIVSCVSTIFNRLASENQVWQEVYCERWG 114

Query: 394 LPVGSTVLGSEYSNEKSWKELFIEREYRSKTFLGRYSIDCLYGHREPVRTVFLLNSKKLI 215
           LP+     G   S+EKSWKELF+ERE+RSKTFLGRYSID LYGH E VRTVFLL S KL+
Sbjct: 115 LPLVPAPSGVGISDEKSWKELFVEREFRSKTFLGRYSIDVLYGHTEAVRTVFLLASAKLV 174

Query: 214 FTSGYDSIVQMWDMEEGLSISSSRPLGGTIRAVAADTKLLIAGGTDGFIHGWRAEEGHPH 35
           FTSGYDS+V+MWDME+GLSI+SSRPLG TIRAVAADTKLL+AGGTDGFI GWRA EG P 
Sbjct: 175 FTSGYDSVVRMWDMEDGLSIASSRPLGCTIRAVAADTKLLVAGGTDGFIQGWRAVEGLPC 234

Query: 34  LFDLCGPQ 11
           LF+L G Q
Sbjct: 235 LFNLKGSQ 242


>ref|XP_003545182.1| PREDICTED: F-box/WD-40 repeat-containing protein At5g21040-like
           [Glycine max]
          Length = 570

 Score =  282 bits (722), Expect = 3e-74
 Identities = 141/212 (66%), Positives = 168/212 (79%), Gaps = 2/212 (0%)
 Frame = -1

Query: 631 NSEETI-AKVDIVSEISVSGNSVLTTSRRSITDLPPALVSEILNCLDPKELGIVSCVSTS 455
           NS++ I A V  +++ S+ G+ V      SITDLPPAL+SEILNCLDPK+LG+VSCVS  
Sbjct: 68  NSKKGIKAPVSALNQSSIPGDVVFNCGL-SITDLPPALISEILNCLDPKDLGVVSCVSPI 126

Query: 454 LYAVAAEHHVWKEFYCERWGLPVGSTVLGSEY-SNEKSWKELFIEREYRSKTFLGRYSID 278
           L  VA+EHH WK+FYCERWGLP  S  +GS    ++KSW+ELF+ERE+RSKTF+G+YSID
Sbjct: 127 LQRVASEHHAWKQFYCERWGLPAASLAVGSGVVDDDKSWRELFVEREFRSKTFMGQYSID 186

Query: 277 CLYGHREPVRTVFLLNSKKLIFTSGYDSIVQMWDMEEGLSISSSRPLGGTIRAVAADTKL 98
            LYGH E VRT+FLL S KLIFTSGYDS+V+MWDME GLSI+SSRPLG TIRAVAAD KL
Sbjct: 187 VLYGHTEAVRTIFLLASAKLIFTSGYDSVVRMWDMENGLSIASSRPLGCTIRAVAADRKL 246

Query: 97  LIAGGTDGFIHGWRAEEGHPHLFDLCGPQNQD 2
           L+AGGTDGFIH WRA E  PH F+    QNQ+
Sbjct: 247 LVAGGTDGFIHCWRAVEDLPHSFEFRATQNQN 278


>ref|XP_003519479.1| PREDICTED: F-box/WD-40 repeat-containing protein At5g21040-like
           [Glycine max]
          Length = 570

 Score =  279 bits (713), Expect = 4e-73
 Identities = 141/212 (66%), Positives = 169/212 (79%), Gaps = 2/212 (0%)
 Frame = -1

Query: 631 NSEETI-AKVDIVSEISVSGNSVLTTSRRSITDLPPALVSEILNCLDPKELGIVSCVSTS 455
           NS++ I A V  ++++S+ G+ V+     SITDLPPAL+SEILNCLDPK+LG+VSCVST 
Sbjct: 67  NSKKGIKAPVSALNQLSIPGD-VIFNCGLSITDLPPALISEILNCLDPKDLGVVSCVSTI 125

Query: 454 LYAVAAEHHVWKEFYCERWGLPVGSTVLGSEY-SNEKSWKELFIEREYRSKTFLGRYSID 278
              VA+EH  WK+FYCERWGLP  S  + S    ++KSW+ELF+ERE+R+KTF+GRYSID
Sbjct: 126 FQRVASEHGAWKQFYCERWGLPTASLAVDSGVVDDDKSWRELFVEREFRTKTFMGRYSID 185

Query: 277 CLYGHREPVRTVFLLNSKKLIFTSGYDSIVQMWDMEEGLSISSSRPLGGTIRAVAADTKL 98
            LYGH E VRTVFLL S KLIFTSGYDS+V+MWDME GLSI+SSRPLG TIRAVAAD KL
Sbjct: 186 VLYGHTEAVRTVFLLASAKLIFTSGYDSVVRMWDMENGLSIASSRPLGCTIRAVAADRKL 245

Query: 97  LIAGGTDGFIHGWRAEEGHPHLFDLCGPQNQD 2
           L+AGGTDGFIH WRA E   HLF+L   QNQ+
Sbjct: 246 LVAGGTDGFIHCWRAVEDLLHLFELRATQNQN 277


>ref|XP_003617076.1| F-box/WD-40 repeat-containing protein [Medicago truncatula]
           gi|355518411|gb|AET00035.1| F-box/WD-40
           repeat-containing protein [Medicago truncatula]
          Length = 575

 Score =  279 bits (713), Expect = 4e-73
 Identities = 139/216 (64%), Positives = 169/216 (78%), Gaps = 9/216 (4%)
 Frame = -1

Query: 631 NSEETI--AKVDIVSEISVSGNSVLTTSRRSITDLPPALVSEILNCLDPKELGIVSCVST 458
           NS++ I  A    +++ SV G+ V+   R SITDLPP L+SEILNCLDPKELGIVSCVS 
Sbjct: 65  NSKKGIKAASAGALNQSSVPGDVVIGNCR-SITDLPPVLISEILNCLDPKELGIVSCVSL 123

Query: 457 SLYAVAAEHHVWKEFYCERWGLPV-------GSTVLGSEYSNEKSWKELFIEREYRSKTF 299
            L ++A+EHH WKEFYCERWGLP          + +G    +EKSWK++F+ER+YRSKTF
Sbjct: 124 ILRSLASEHHAWKEFYCERWGLPAVPEAVLDSDSGVGDSVKDEKSWKDIFVERDYRSKTF 183

Query: 298 LGRYSIDCLYGHREPVRTVFLLNSKKLIFTSGYDSIVQMWDMEEGLSISSSRPLGGTIRA 119
           +GRYS+D LYGH E VRTVFLL S KLIFTSGYD++V+MW+ME GLS++SS+PLG TIRA
Sbjct: 184 MGRYSMDVLYGHTEAVRTVFLLASTKLIFTSGYDTVVRMWNMESGLSVASSKPLGCTIRA 243

Query: 118 VAADTKLLIAGGTDGFIHGWRAEEGHPHLFDLCGPQ 11
           VAADT+LL+AGGTDGFIH WRA EG PHLF+L   Q
Sbjct: 244 VAADTRLLVAGGTDGFIHCWRAVEGLPHLFELRNSQ 279


>ref|XP_002312850.1| predicted protein [Populus trichocarpa] gi|222849258|gb|EEE86805.1|
           predicted protein [Populus trichocarpa]
          Length = 543

 Score =  279 bits (713), Expect = 4e-73
 Identities = 144/203 (70%), Positives = 162/203 (79%), Gaps = 3/203 (1%)
 Frame = -1

Query: 610 KVDIVSEIS---VSGNSVLTTSRRSITDLPPALVSEILNCLDPKELGIVSCVSTSLYAVA 440
           K  I+S +S   +S N VL   RRSITDLPPAL+SEIL+CLDP+ELGIVSCVS  L ++A
Sbjct: 41  KKGILSSLSSKQLSCNDVLLNCRRSITDLPPALISEILSCLDPQELGIVSCVSRVLNSLA 100

Query: 439 AEHHVWKEFYCERWGLPVGSTVLGSEYSNEKSWKELFIEREYRSKTFLGRYSIDCLYGHR 260
            E+ VWKE Y ERWGLP+    LG+  SNEKSWKELF+EREYRSK FL RYSID L+GH 
Sbjct: 101 TENSVWKEVYGERWGLPIVPAPLGAGVSNEKSWKELFVEREYRSKIFLSRYSIDTLHGHT 160

Query: 259 EPVRTVFLLNSKKLIFTSGYDSIVQMWDMEEGLSISSSRPLGGTIRAVAADTKLLIAGGT 80
           E VRTV LL S KLIFTSGYD IV+MWDME+GL I+SSRPLG TIRAVAADTKLL+AGGT
Sbjct: 161 EAVRTVSLLASAKLIFTSGYDMIVRMWDMEDGLYIASSRPLGCTIRAVAADTKLLVAGGT 220

Query: 79  DGFIHGWRAEEGHPHLFDLCGPQ 11
           DGFI GWRA EG  HLFDL G +
Sbjct: 221 DGFIQGWRAVEGLKHLFDLKGSE 243


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