BLASTX nr result

ID: Bupleurum21_contig00005705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005705
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267941.1| PREDICTED: microtubule-associated protein SP...   103   2e-20
emb|CBI32067.3| unnamed protein product [Vitis vinifera]              101   8e-20
ref|XP_002280600.1| PREDICTED: microtubule-associated protein TO...    97   2e-18
ref|XP_002315702.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_003613461.1| Microtubule-associated protein TORTIFOLIA1 [...    96   3e-18

>ref|XP_002267941.1| PREDICTED: microtubule-associated protein SPIRAL2-like [Vitis
           vinifera]
          Length = 654

 Score =  103 bits (257), Expect = 2e-20
 Identities = 55/106 (51%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
 Frame = -2

Query: 317 MAAISKRSANQATVA-REFKHRVLTCLNKLSDRDTYSAAATELESIAKTLNHXXXXXXXX 141
           M+  S  S ++ TV+ R+ KHRV+TCLNKLSDRDT +    ELESIA+ L H        
Sbjct: 4   MSLSSSPSLSKKTVSTRDLKHRVITCLNKLSDRDTLAVGTAELESIARNLTHDSFSPFLS 63

Query: 140 XXXXXXXXXXSPVRKQCVRLVSLLSESHGNILSPHLSKLISSVIRR 3
                     SPVRKQCVRL+ +LSE+HG+ LSPHLSK++S+V+RR
Sbjct: 64  CLYGTDSSEKSPVRKQCVRLLGVLSETHGDSLSPHLSKMLSNVVRR 109


>emb|CBI32067.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  101 bits (251), Expect = 8e-20
 Identities = 50/97 (51%), Positives = 65/97 (67%)
 Frame = -2

Query: 293 ANQATVAREFKHRVLTCLNKLSDRDTYSAAATELESIAKTLNHXXXXXXXXXXXXXXXXX 114
           +++    R+ KHRV+TCLNKLSDRDT +    ELESIA+ L H                 
Sbjct: 12  SDKTVSTRDLKHRVITCLNKLSDRDTLAVGTAELESIARNLTHDSFSPFLSCLYGTDSSE 71

Query: 113 XSPVRKQCVRLVSLLSESHGNILSPHLSKLISSVIRR 3
            SPVRKQCVRL+ +LSE+HG+ LSPHLSK++S+V+RR
Sbjct: 72  KSPVRKQCVRLLGVLSETHGDSLSPHLSKMLSNVVRR 108


>ref|XP_002280600.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Vitis
           vinifera]
          Length = 638

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/90 (56%), Positives = 61/90 (67%)
 Frame = -2

Query: 272 REFKHRVLTCLNKLSDRDTYSAAATELESIAKTLNHXXXXXXXXXXXXXXXXXXSPVRKQ 93
           +  KHRV TCL KLSDRDT S AATELESIA+TL                    SPVRKQ
Sbjct: 10  QNLKHRVFTCLTKLSDRDTQSIAATELESIARTLTQDLLPPFLSCIHQTDPSDKSPVRKQ 69

Query: 92  CVRLVSLLSESHGNILSPHLSKLISSVIRR 3
           CVRL+ +LSE+HG+ LSP LSK++S++IRR
Sbjct: 70  CVRLLGILSETHGDALSPFLSKMLSNLIRR 99


>ref|XP_002315702.1| predicted protein [Populus trichocarpa] gi|222864742|gb|EEF01873.1|
           predicted protein [Populus trichocarpa]
          Length = 631

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 53/93 (56%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
 Frame = -2

Query: 278 VAREFKHRVLTCLNKLSDRDTYSAAATELESIAKTLNHXXXXXXXXXXXXXXXXXXS-PV 102
           VA + KHRV+ CLNKLSDRDT S A TELESIAK L+                     PV
Sbjct: 9   VANDLKHRVIICLNKLSDRDTVSVATTELESIAKNLSTPDSFSHFLNCIHNTDSSSKSPV 68

Query: 101 RKQCVRLVSLLSESHGNILSPHLSKLISSVIRR 3
           RKQCV L++LLS SHGN LSPHLSK+IS++ RR
Sbjct: 69  RKQCVSLLTLLSRSHGNSLSPHLSKMISTITRR 101


>ref|XP_003613461.1| Microtubule-associated protein TORTIFOLIA1 [Medicago truncatula]
           gi|355514796|gb|AES96419.1| Microtubule-associated
           protein TORTIFOLIA1 [Medicago truncatula]
          Length = 750

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 51/94 (54%), Positives = 62/94 (65%)
 Frame = -2

Query: 284 ATVAREFKHRVLTCLNKLSDRDTYSAAATELESIAKTLNHXXXXXXXXXXXXXXXXXXSP 105
           AT     + RV+TCLNKLSDRDT + A  ELESIAKTLNH                  SP
Sbjct: 16  ATTPPNLRQRVITCLNKLSDRDTLAGATVELESIAKTLNHDTFSSFLSCIHNTDSSTKSP 75

Query: 104 VRKQCVRLVSLLSESHGNILSPHLSKLISSVIRR 3
           VRKQCV L++LLS+ HG+ LSP LSK+I++V+RR
Sbjct: 76  VRKQCVNLLTLLSKFHGDALSPFLSKMIATVLRR 109


Top