BLASTX nr result

ID: Bupleurum21_contig00005690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005690
         (1203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279808.1| PREDICTED: auxin response factor 6-like [Vit...   375   e-102
gb|ADL36576.1| ARF domain class transcription factor [Malus x do...   350   5e-94
ref|XP_002316773.1| predicted protein [Populus trichocarpa] gi|2...   342   8e-92
ref|XP_004166469.1| PREDICTED: auxin response factor 6-like [Cuc...   341   2e-91
ref|XP_004134558.1| PREDICTED: auxin response factor 6-like [Cuc...   341   2e-91

>ref|XP_002279808.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
          Length = 908

 Score =  375 bits (964), Expect = e-102
 Identities = 196/283 (69%), Positives = 222/283 (78%), Gaps = 4/283 (1%)
 Frame = -2

Query: 839  SPSLHSRTSM-QQQSFSDSNGNPITSPVASPMHNITSSYLQDENSQFLNFSRS-ALLTSA 666
            SPSL + +S+ QQQSFSDS GNP TSP+ SP+ ++  S+ QDE+S  LN  RS +L+ SA
Sbjct: 573  SPSLQTISSLCQQQSFSDSTGNPGTSPIISPLQSLLGSFPQDESSNLLNMPRSTSLMPSA 632

Query: 665  GWPPKRVALDPLLSSGVSQSVLPQMEQLGSLHTNISQNAYSLPPYPGRDCSIDQDGDNDP 486
             W PKRVA++PLL SG SQ +LPQ+EQLG   TNISQN+ SLPP+PGR+CSIDQ+G  DP
Sbjct: 633  AWLPKRVAVEPLLPSGASQCILPQVEQLGQPQTNISQNSISLPPFPGRECSIDQEGSTDP 692

Query: 485  QSRLLFGVNIDSTSLV-PNXXXXXXXXXXXXXSTTIPFTSSNYMSTAGIDFSLNP-LAAS 312
            QS LLFGVNI+ +SL+  N             ST IPF+SSN+MS+ G DFSLNP +  S
Sbjct: 693  QSHLLFGVNIEPSSLLMQNGMSGLRGVGSESDSTAIPFSSSNFMSSTGTDFSLNPAMTPS 752

Query: 311  SCIDESNFLQSPANVGQENTPTGTFVKVYKSGSFGRSLDIAKFSSYIELRSELAHMFGLE 132
            SCIDES FLQSP NVGQ N PT TFVKVYKSGSFGRSLDI KFSSY ELR ELA MFGLE
Sbjct: 753  SCIDESGFLQSPENVGQVNPPTRTFVKVYKSGSFGRSLDITKFSSYHELRGELARMFGLE 812

Query: 131  GQLEDPLRSGWQLVFVDRENDVLLLGDDPWQEFVNSVWCIKIL 3
            GQLEDP RSGWQLVFVDRENDVLLLGDDPW EFVNSVWCIKIL
Sbjct: 813  GQLEDPRRSGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKIL 855


>gb|ADL36576.1| ARF domain class transcription factor [Malus x domestica]
          Length = 895

 Score =  350 bits (897), Expect = 5e-94
 Identities = 181/282 (64%), Positives = 210/282 (74%), Gaps = 3/282 (1%)
 Frame = -2

Query: 839  SPSLHSRTSM-QQQSFSDSNGNPITSPVASPMHNITSSYLQDENSQFLNFSRS-ALLTSA 666
            SPSL   T++  QQSFSDSNGNP TS V SP+HN+  S+ QDE+S  LN  R+  L++S 
Sbjct: 561  SPSLQVVTTLCHQQSFSDSNGNPATSTVISPLHNLMGSFPQDESSHLLNLPRTNQLISSD 620

Query: 665  GWPPKRVALDPLLSSGVSQSVLPQMEQLGSLHTNISQNAYSLPPYPGRDCSIDQDGDNDP 486
            GWP KR A+DPLLSSGVSQ VLP++EQ G  HT +SQN+ SLPP+PGR+CS+DQ+G  DP
Sbjct: 621  GWPSKRAAIDPLLSSGVSQCVLPRVEQFGPPHTTMSQNSISLPPFPGRECSLDQEGGTDP 680

Query: 485  QSRLLFGVNIDSTSLVPNXXXXXXXXXXXXXSTTIPFTSSNYMSTAGIDFSLNP-LAASS 309
            QS LLFGVNI+S+ L+                +T     SNYMSTAG DFS+NP +  SS
Sbjct: 681  QSHLLFGVNIESSPLIMQSGMSNLRGVGSDCGSTTMHFPSNYMSTAGSDFSINPAVTPSS 740

Query: 308  CIDESNFLQSPANVGQENTPTGTFVKVYKSGSFGRSLDIAKFSSYIELRSELAHMFGLEG 129
            CI ES FLQS  N    +     FVKVYKSGSFGRSLDI KFSSY ELR+ELA MFGLEG
Sbjct: 741  CIHESGFLQSSENADNGDPLNRNFVKVYKSGSFGRSLDITKFSSYQELRNELARMFGLEG 800

Query: 128  QLEDPLRSGWQLVFVDRENDVLLLGDDPWQEFVNSVWCIKIL 3
            +L+DP+RSGWQLVFVDRENDVLLLGDDPW EFVNSVWCIKIL
Sbjct: 801  KLDDPVRSGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKIL 842


>ref|XP_002316773.1| predicted protein [Populus trichocarpa] gi|222859838|gb|EEE97385.1|
            predicted protein [Populus trichocarpa]
          Length = 914

 Score =  342 bits (878), Expect = 8e-92
 Identities = 181/282 (64%), Positives = 212/282 (75%), Gaps = 3/282 (1%)
 Frame = -2

Query: 839  SPSLHSRTSMQQQSFSDSNGNPITSPVASPMHNITSSYLQDENSQFLNFSRS-ALLTSAG 663
            +P L + +  QQ SFSDSNGN +TSPV SP+ ++  S+ QDE S   NF R+  L TS+G
Sbjct: 578  TPPLQAISLCQQHSFSDSNGNLVTSPVVSPLQSLLGSFPQDETSHLFNFPRTNPLTTSSG 637

Query: 662  WPPKRVALDPLLSSGVSQSVLPQMEQLGSLHTNISQNAYSLPPYPGRDCSIDQDGDNDPQ 483
            WP KR A+DPL+SS   Q ++ Q+EQLG   T+IS ++ SL P+PGR+C  +QDG  DPQ
Sbjct: 638  WPSKRAAVDPLISSVAPQCMMSQVEQLGPPQTSISPSSVSLLPFPGRECPTEQDGGTDPQ 697

Query: 482  SRLLFGVNIDSTSLV-PNXXXXXXXXXXXXXSTTIPFTSSNYMSTAGIDFSLNP-LAASS 309
            S LLFGV+I+ +SL+  N             STT+PF SSNYMS AG +FSLNP +A SS
Sbjct: 698  SHLLFGVSIEPSSLLMQNGLSSLRGVGSDSDSTTVPF-SSNYMSIAGTNFSLNPAMAPSS 756

Query: 308  CIDESNFLQSPANVGQENTPTGTFVKVYKSGSFGRSLDIAKFSSYIELRSELAHMFGLEG 129
            CIDES FLQS  NVGQ N P+ TFVKVYKSGSFGRSLDI KFS+Y ELRSELA MFGLEG
Sbjct: 757  CIDESGFLQSMENVGQGNPPSRTFVKVYKSGSFGRSLDITKFSNYNELRSELAFMFGLEG 816

Query: 128  QLEDPLRSGWQLVFVDRENDVLLLGDDPWQEFVNSVWCIKIL 3
            QLEDPLRSGWQLVF+DRENDVLLLGD PW EFVNSVWCIKIL
Sbjct: 817  QLEDPLRSGWQLVFIDRENDVLLLGDGPWPEFVNSVWCIKIL 858


>ref|XP_004166469.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
          Length = 916

 Score =  341 bits (874), Expect = 2e-91
 Identities = 181/275 (65%), Positives = 213/275 (77%), Gaps = 6/275 (2%)
 Frame = -2

Query: 809  QQQSFSDSNGNPITSPVASPMHNITS-SYLQDENSQFLNFSRS-ALLTSAGWPPKRVALD 636
            +QQSFSDSN N +TSP+ SP+H++   S+ QDE+SQ LN  R+  ++ S+ WP KR A+D
Sbjct: 590  RQQSFSDSNPNHVTSPIISPLHSLLGGSFSQDESSQMLNLPRTNPMIHSSTWPSKRAAID 649

Query: 635  PLLSSGVSQSVLPQMEQLGSLHTNISQNAYSLPPYPGRDCSIDQDGDNDPQSRLLFGVNI 456
            PLLSSG SQ VL Q E +G+   NISQNA+SLPP+PGR+CS+DQ G+ DPQS LLFGVNI
Sbjct: 650  PLLSSGNSQFVLSQGENIGTTPANISQNAFSLPPFPGRECSLDQ-GNVDPQSNLLFGVNI 708

Query: 455  DSTSLV-PNXXXXXXXXXXXXXSTTIPFTSSNYMSTAGIDFSLNPLAA---SSCIDESNF 288
            + +SL+  N             ST IPF SSNY++TAG +FS NP      S+C ++S F
Sbjct: 709  EPSSLLMQNGMPNLRGICSDSDSTAIPF-SSNYVNTAGTNFSANPTGTGTPSNCNEDSGF 767

Query: 287  LQSPANVGQENTPTGTFVKVYKSGSFGRSLDIAKFSSYIELRSELAHMFGLEGQLEDPLR 108
            LQSP N GQ N PT TFVKVYKSGSFGRSLDI+KFSSY +LRSELAHMFGLEG+LEDPLR
Sbjct: 768  LQSPENTGQVNPPTRTFVKVYKSGSFGRSLDISKFSSYHQLRSELAHMFGLEGELEDPLR 827

Query: 107  SGWQLVFVDRENDVLLLGDDPWQEFVNSVWCIKIL 3
            SGWQLVFVDRENDVLLLGDDPW EFVNSVWCIKIL
Sbjct: 828  SGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKIL 862


>ref|XP_004134558.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
          Length = 902

 Score =  341 bits (874), Expect = 2e-91
 Identities = 181/275 (65%), Positives = 213/275 (77%), Gaps = 6/275 (2%)
 Frame = -2

Query: 809  QQQSFSDSNGNPITSPVASPMHNITS-SYLQDENSQFLNFSRS-ALLTSAGWPPKRVALD 636
            +QQSFSDSN N +TSP+ SP+H++   S+ QDE+SQ LN  R+  ++ S+ WP KR A+D
Sbjct: 576  RQQSFSDSNPNHVTSPIISPLHSLLGGSFSQDESSQMLNLPRTNPMIHSSTWPSKRAAID 635

Query: 635  PLLSSGVSQSVLPQMEQLGSLHTNISQNAYSLPPYPGRDCSIDQDGDNDPQSRLLFGVNI 456
            PLLSSG SQ VL Q E +G+   NISQNA+SLPP+PGR+CS+DQ G+ DPQS LLFGVNI
Sbjct: 636  PLLSSGNSQFVLSQGENIGTTPANISQNAFSLPPFPGRECSLDQ-GNVDPQSNLLFGVNI 694

Query: 455  DSTSLV-PNXXXXXXXXXXXXXSTTIPFTSSNYMSTAGIDFSLNPLAA---SSCIDESNF 288
            + +SL+  N             ST IPF SSNY++TAG +FS NP      S+C ++S F
Sbjct: 695  EPSSLLMQNGMPNLRGICSDSDSTAIPF-SSNYVNTAGTNFSANPTGTGTPSNCNEDSGF 753

Query: 287  LQSPANVGQENTPTGTFVKVYKSGSFGRSLDIAKFSSYIELRSELAHMFGLEGQLEDPLR 108
            LQSP N GQ N PT TFVKVYKSGSFGRSLDI+KFSSY +LRSELAHMFGLEG+LEDPLR
Sbjct: 754  LQSPENTGQVNPPTRTFVKVYKSGSFGRSLDISKFSSYHQLRSELAHMFGLEGELEDPLR 813

Query: 107  SGWQLVFVDRENDVLLLGDDPWQEFVNSVWCIKIL 3
            SGWQLVFVDRENDVLLLGDDPW EFVNSVWCIKIL
Sbjct: 814  SGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKIL 848


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