BLASTX nr result

ID: Bupleurum21_contig00005671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005671
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN88198.1| retropepsin-like protein [Phaseolus vulgaris]          247   2e-63
ref|XP_004173142.1| PREDICTED: uncharacterized protein LOC101232...   187   2e-45
gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]    157   3e-36
emb|CAN78493.1| hypothetical protein VITISV_037041 [Vitis vinifera]   142   9e-32
emb|CAN65719.1| hypothetical protein VITISV_020846 [Vitis vinifera]   138   1e-30

>gb|AFN88198.1| retropepsin-like protein [Phaseolus vulgaris]
          Length = 725

 Score =  247 bits (631), Expect = 2e-63
 Identities = 131/244 (53%), Positives = 167/244 (68%), Gaps = 7/244 (2%)
 Frame = -2

Query: 716 EDPHKHLKEFQVIVASMKPPNVLEEQVKMRAFPFSLEGKAKDWLYYLPSGSITSWASLQK 537
           EDPHKHLK+F  +  +M+P  V E+ +K++AFP SL+  AKDWLYYLP+GS+T+W  L++
Sbjct: 29  EDPHKHLKKFHTMCTTMRPAGVTEKHIKLKAFPSSLQDAAKDWLYYLPAGSVTNWERLKR 88

Query: 536 MFLAKYFPALRVGSVRKEICGARQNNGESLYEYWERFKRLVSSCPQHQIPEQLLLQYFYE 357
           +FL K+FPA R  S+RKEICG RQ + ESLYEYWE FKRL +SCP HQI EQLL+QYF E
Sbjct: 89  VFLEKFFPASRATSIRKEICGIRQQDRESLYEYWEIFKRLCTSCPYHQINEQLLIQYFDE 148

Query: 356 GLAPMDRGMIDAASGGALVDKTPNEARTLIENMALNAQQFGGREVSIK--ERVHEVGVN- 186
           GL P++R MIDAASGGALVDKTP  AR +IE MA N QQF  R  S      VHE+  N 
Sbjct: 149 GLIPINRQMIDAASGGALVDKTPVAARQVIEIMASNNQQFHTRSNSAAPVRGVHEMTTNY 208

Query: 185 ----SKIESRIDDLTHMVKQLAMKSGNPEKVCGVCALTGHFSHECPMNVQGDEEEQVNAI 18
               +++++++DDLT M KQL M      +VCG+C +  H +  CP      E E  N +
Sbjct: 209 VADHAQMKAQLDDLTSMTKQLTMPQ-MVARVCGIC-IANHATDACPTL---QEVEGGNNV 263

Query: 17  GVPQ 6
             PQ
Sbjct: 264 ECPQ 267


>ref|XP_004173142.1| PREDICTED: uncharacterized protein LOC101232801 [Cucumis sativus]
          Length = 573

 Score =  187 bits (475), Expect = 2e-45
 Identities = 103/236 (43%), Positives = 147/236 (62%), Gaps = 2/236 (0%)
 Frame = -2

Query: 716 EDPHKHLKEFQVIVASMKPPNVLEEQVKMRAFPFSLEGKAKDWLYYLPSGSITSWASLQK 537
           EDPHKHL++F      ++P  V EEQ+ +RAF FSL   AK WL  L S +IT+W  L+K
Sbjct: 114 EDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFSFSLADSAKRWLINLESQTITTWEQLKK 173

Query: 536 MFLAKYFPALRVGSVRKEICGARQNNGESLYEYWERFKRLVSSCPQHQIPEQLLLQYFYE 357
            FL K+FP  R  +V KEI GARQ+N E+L+EYWER+  L +  P +Q+ E+ ++QYFY 
Sbjct: 174 RFLEKFFPITRAQTVLKEIYGARQSNNETLFEYWERYIELCARLPYNQLSERDIVQYFYL 233

Query: 356 GLAPMDRGMIDAASGGALVDKTPNEARTLIENMALNAQQF-GGREVSIKERVHEVGVNSK 180
           GL       IDAASGGAL+DKTP+EA+ L+  MA N+Q F   R + +      +  ++ 
Sbjct: 234 GLLASVGDFIDAASGGALIDKTPSEAKRLVSRMAKNSQNFTTSRTLDMNS---SLSCDNY 290

Query: 179 IESRIDDLTHMVKQLAMKSGNPEKV-CGVCALTGHFSHECPMNVQGDEEEQVNAIG 15
           ++ +++ LT M     +K   P+ V CGVC L GH + +CP      E ++V+A+G
Sbjct: 291 VKEQVNLLTKMFTSF-VKGEVPKVVSCGVCGLLGHHNDQCP------EIKEVSALG 339


>gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 275

 Score =  157 bits (396), Expect = 3e-36
 Identities = 82/199 (41%), Positives = 119/199 (59%), Gaps = 2/199 (1%)
 Frame = -2

Query: 653 VLEEQVKMRAFPFSLEGKAKDWLYYLPSGSITSWASLQKMFLAKYFPALRVGSVRKEICG 474
           V ++ +K+R FPFSL  KA+ WL  LP GSIT+W  L + FLAKYFP  +   +R +I  
Sbjct: 4   VSDDAIKLRLFPFSLRDKARAWLQSLPPGSITTWDQLSEAFLAKYFPPSKTAQLRNQITT 63

Query: 473 ARQNNGESLYEYWERFKRLVSSCPQHQIPEQLLLQYFYEGLAPMDRGMIDAASGGALVDK 294
             Q  GESLY+ WER+K L+  CP H + + L++  FY GL    R  +DAA+GGAL++K
Sbjct: 64  FTQKEGESLYDAWERYKDLLRMCPHHGLEDWLIIHTFYNGLLYNTRMTVDAAAGGALMNK 123

Query: 293 TPNEARTLIENMALNAQQFGG-REVSIKERVHEVGVNSKIESRIDDLTHMVKQLAMKS-G 120
           +  +A+ LIE+MA N  Q+ G R +  K   ++V     I SR+D L     +++M S  
Sbjct: 124 SVRDAKQLIEDMAQNHFQWSGERSLPKKSGRYDVDALDHIASRVDALFQKFDKMSMNSVA 183

Query: 119 NPEKVCGVCALTGHFSHEC 63
           +    C +C + GH + EC
Sbjct: 184 SNSTNCEICGIIGHSAVEC 202


>emb|CAN78493.1| hypothetical protein VITISV_037041 [Vitis vinifera]
          Length = 1048

 Score =  142 bits (357), Expect = 9e-32
 Identities = 85/223 (38%), Positives = 126/223 (56%), Gaps = 5/223 (2%)
 Frame = -2

Query: 671 SMKPPNVLEEQVKMRAFPFSLEGKAKDWLYYLPSGSITSWASLQKMFLAKYFPALRVGSV 492
           + K   V ++ +++R FPFSL  KAK WL  LP G+IT+W  L   FLAKYFP  +   +
Sbjct: 21  TFKHNGVTDDAIRLRLFPFSLNNKAKAWLISLPPGTITTWDGLVNAFLAKYFPLAKSTKM 80

Query: 491 RKEICGARQNNGESLYEYWERFKRLVSSCPQHQIPEQLLLQYFYEGLAPMDRGMIDAASG 312
           R +I    Q + ESLYE WERFK L+  CP H +P  +  Q FY  L P  + M+DAASG
Sbjct: 81  RNDITNFLQQDQESLYEAWERFKDLLRKCPHHGLPIWMQAQMFYNSLHPNTQTMVDAASG 140

Query: 311 GALVDKTPNEARTLIENMALNAQQFGGREVSIKER---VHEVGVNSKIESRIDDLTHMVK 141
           GA ++KTP+E   LI+ MA N       + + ++R   VH++ V + + +++  L +  K
Sbjct: 141 GAFINKTPDEGYQLIKVMASN-NFLKSTDRNAQKRTVGVHDIDVFNNLATQVAILNNNFK 199

Query: 140 QLAMKSGNPEKVCGVCALTGHFSHECPMN--VQGDEEEQVNAI 18
           +L +   +   VC  CA   H S EC +    + +  +QVN +
Sbjct: 200 KLNVVVVS-NLVCENCA-GNHPSLECQVGGPYEANPSKQVNYV 240


>emb|CAN65719.1| hypothetical protein VITISV_020846 [Vitis vinifera]
          Length = 1791

 Score =  138 bits (348), Expect = 1e-30
 Identities = 81/257 (31%), Positives = 133/257 (51%), Gaps = 23/257 (8%)
 Frame = -2

Query: 716 EDPHKHLKEFQVIVASMKPPNVLEEQVKMRAFPFSLEGKAKDWLYYLPSGSITSWASLQK 537
           E+P+ H+KEF+ IV+  +  N   E  +M+ FP SL+ KAK WL  L   SI +W  LQ 
Sbjct: 67  ENPYSHIKEFEDIVSIFREANTPLEIFRMKLFPLSLKDKAKTWLNSLRPYSIRNWGDLQS 126

Query: 536 MFLAKYFPALRVGSVRKEICGARQNNGESLYEYWERFKRLVSSCPQHQIPEQLLLQYFYE 357
           +FL K+FP  R  +++KEI   +    E  +  WERF+ +V++CP H     +L+ YFYE
Sbjct: 127 VFLQKFFPTHRTSALKKEISNFKAMEDEKFFACWERFREIVAACPHHGFDNWMLVSYFYE 186

Query: 356 GLAPMDRGMIDAASGGALVDKTPNEARTLIENMALNAQQFGGREVSIKERVHEVGVN--- 186
           G+AP  + +++   GG  ++K P+EA   ++ +A  ++ +   E  +KE   +  +N   
Sbjct: 187 GMAPPMKQLLETMCGGDFMNKNPDEAFQFLDYVAEVSRSWD--EPIVKEPSRDRTMNRAR 244

Query: 185 -----------------SKIESRIDDL-THMVKQLAMKSGNPEKVCGVCALTGHFSHECP 60
                            + +  R+DDL    V+++ + +    ++C +C  T H    CP
Sbjct: 245 ASGVYTLPEGLDVQAKLTTVMRRLDDLEAKGVQEVQIVNDGVTQLCLICKSTEHGVQSCP 304

Query: 59  M--NVQGDEEEQVNAIG 15
               VQ    EQ NA+G
Sbjct: 305 TLPAVQDMFTEQANALG 321


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