BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005633
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II su...    80   1e-13
emb|CBI26363.3| unnamed protein product [Vitis vinifera]               80   1e-13
ref|XP_002868270.1| RNA polymerase Rpb7 N-terminal domain-contai...    78   8e-13
ref|XP_002312568.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|NP_193202.2| DNA-directed RNA polymerase II subunit G [Arabi...    76   2e-12

>ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Cucumis sativus] gi|449522228|ref|XP_004168129.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB7-like [Cucumis sativus]
          Length = 175

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/50 (72%), Positives = 45/50 (90%)
 Frame = +1

Query: 163 MFLKAQLQWNVIIPAENLDAKGLALRKAITVRLMDEFASKRATSELGYFI 312
           MFLK QL WNVIIPAENLDAKGL L+++I +RL+DEFA+K+AT +LGYF+
Sbjct: 1   MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFL 50


>emb|CBI26363.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
 Frame = +1

Query: 46  SPKGLHFSITHIFAKKNRAEVEKHK-GPFG*IATLLCGGNMFLKAQLQWNVIIPAENLDA 222
           S K     +TH F+ K RA V   +  P      +     MFLK QL WNVIIPAE LDA
Sbjct: 26  SAKETKIQLTHSFSAKARARVTTRRISPDSEPLLVRWKTEMFLKVQLPWNVIIPAECLDA 85

Query: 223 KGLALRKAITVRLMDEFASKRATSELGYFI 312
           KGL L+++I +RL+D F++K+AT ELGYF+
Sbjct: 86  KGLMLQRSIIIRLLDAFSNKKATQELGYFL 115


>ref|XP_002868270.1| RNA polymerase Rpb7 N-terminal domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297314106|gb|EFH44529.1| RNA polymerase Rpb7
           N-terminal domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 178

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 35/50 (70%), Positives = 43/50 (86%)
 Frame = +1

Query: 163 MFLKAQLQWNVIIPAENLDAKGLALRKAITVRLMDEFASKRATSELGYFI 312
           MFLK QL WNV+IPAEN+DAKGL L++AI V L+D FASK+AT ELGY++
Sbjct: 1   MFLKVQLPWNVMIPAENMDAKGLILKRAILVELLDAFASKKATKELGYYV 50


>ref|XP_002312568.1| predicted protein [Populus trichocarpa] gi|222852388|gb|EEE89935.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/50 (70%), Positives = 43/50 (86%)
 Frame = +1

Query: 163 MFLKAQLQWNVIIPAENLDAKGLALRKAITVRLMDEFASKRATSELGYFI 312
           MFLK QL WNVIIPAENLDAKGL L+++I VRL+D+FA K AT +LGY++
Sbjct: 1   MFLKVQLPWNVIIPAENLDAKGLMLQRSIVVRLLDDFAKKGATKDLGYYL 50


>ref|NP_193202.2| DNA-directed RNA polymerase II subunit G [Arabidopsis thaliana]
           gi|149944323|gb|ABR46204.1| At4g14660 [Arabidopsis
           thaliana] gi|332658072|gb|AEE83472.1| DNA-directed RNA
           polymerase II subunit G [Arabidopsis thaliana]
          Length = 178

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 34/50 (68%), Positives = 43/50 (86%)
 Frame = +1

Query: 163 MFLKAQLQWNVIIPAENLDAKGLALRKAITVRLMDEFASKRATSELGYFI 312
           MFLK QL WNV+IPAEN+DAKGL L++AI V L++ FASK+AT ELGY++
Sbjct: 1   MFLKVQLPWNVMIPAENMDAKGLMLKRAILVELLEAFASKKATKELGYYV 50