BLASTX nr result

ID: Bupleurum21_contig00005625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005625
         (952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277414.1| PREDICTED: uncharacterized protein LOC100252...   295   1e-77
ref|XP_002301884.1| predicted protein [Populus trichocarpa] gi|2...   280   4e-73
ref|XP_002890425.1| hypothetical protein ARALYDRAFT_472344 [Arab...   279   8e-73
ref|XP_003529426.1| PREDICTED: UPF0047 protein yjbQ-like [Glycin...   276   5e-72
ref|XP_002510758.1| conserved hypothetical protein [Ricinus comm...   276   7e-72

>ref|XP_002277414.1| PREDICTED: uncharacterized protein LOC100252976 isoform 1 [Vitis
           vinifera]
          Length = 236

 Score =  295 bits (754), Expect = 1e-77
 Identities = 144/196 (73%), Positives = 166/196 (84%), Gaps = 3/196 (1%)
 Frame = -2

Query: 909 IYYKLVQMQTLSASTLFGGISKPV-SNPTRIKSVYTPTTFTDPS-SESMAS-GGPKWAQK 739
           I YK  +   + AS L  G   P+ S+  R+KS+YTPT+F DP+ S SMA+   PKWAQK
Sbjct: 41  ITYKFKEEVPMQASLLSLGAKPPLTSHQIRVKSLYTPTSFNDPTDSTSMAAIPAPKWAQK 100

Query: 738 TVTLPPLKRGCHLVTSKIVKEIGQDMSGFKCGLAHLFLQHTSASLTINENYDSDVREDTE 559
           T+TLPP +RGCH +T KI+KEIGQD+SGFKCGLAHLF+QHTSASLTINENYDSDVR+DTE
Sbjct: 101 TITLPPQRRGCHHITPKILKEIGQDLSGFKCGLAHLFIQHTSASLTINENYDSDVRDDTE 160

Query: 558 TFLNSVVPEGRSAPWKHTIEGSDDMPAHIKSSMFGNNLTIPITDGKLNMGTWQGIWLCEH 379
           TFL+ +VPEGRSAPWKHT+EG DDMPAHIKSSMFG +LTIPITDG+LNMGTWQGIWLCEH
Sbjct: 161 TFLSKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCSLTIPITDGQLNMGTWQGIWLCEH 220

Query: 378 RDYPTARKVVVTLNGI 331
           RD  TARKVVVTLNG+
Sbjct: 221 RDRATARKVVVTLNGV 236


>ref|XP_002301884.1| predicted protein [Populus trichocarpa] gi|222843610|gb|EEE81157.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score =  280 bits (716), Expect = 4e-73
 Identities = 133/166 (80%), Positives = 147/166 (88%), Gaps = 1/166 (0%)
 Frame = -2

Query: 825 RIKSVYTPTTFTDPS-SESMASGGPKWAQKTVTLPPLKRGCHLVTSKIVKEIGQDMSGFK 649
           R+ S+YT      PS S+SMA+  PKWAQKT+TLPP +RGCHL+T KI+ EIG D+S FK
Sbjct: 2   RVSSLYT----AKPSFSDSMATSAPKWAQKTITLPPHRRGCHLITPKILNEIGSDLSEFK 57

Query: 648 CGLAHLFLQHTSASLTINENYDSDVREDTETFLNSVVPEGRSAPWKHTIEGSDDMPAHIK 469
           CGLAHLFL HTSASLTINENYDSDVR+DTETFLN +VPEGRSAPWKHT+EG DDMPAHIK
Sbjct: 58  CGLAHLFLHHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIK 117

Query: 468 SSMFGNNLTIPITDGKLNMGTWQGIWLCEHRDYPTARKVVVTLNGI 331
           SSMFG +LTIPITDGKLNMGTWQGIWLCEHRD+PTARKVVVTLNGI
Sbjct: 118 SSMFGCSLTIPITDGKLNMGTWQGIWLCEHRDHPTARKVVVTLNGI 163


>ref|XP_002890425.1| hypothetical protein ARALYDRAFT_472344 [Arabidopsis lyrata subsp.
           lyrata] gi|297336267|gb|EFH66684.1| hypothetical protein
           ARALYDRAFT_472344 [Arabidopsis lyrata subsp. lyrata]
          Length = 218

 Score =  279 bits (713), Expect = 8e-73
 Identities = 132/182 (72%), Positives = 149/182 (81%)
 Frame = -2

Query: 876 SASTLFGGISKPVSNPTRIKSVYTPTTFTDPSSESMASGGPKWAQKTVTLPPLKRGCHLV 697
           S++ LF G+      P R++SV TP       +   +S GPKWAQKT+TLPPL+RGCHL+
Sbjct: 42  SSTILFSGVV-----PLRVRSVLTPANPATDRASMASSSGPKWAQKTITLPPLRRGCHLI 96

Query: 696 TSKIVKEIGQDMSGFKCGLAHLFLQHTSASLTINENYDSDVREDTETFLNSVVPEGRSAP 517
           T KIVKEIGQD+S F CGLAH+FLQHTSASLTINENYD DV+ DTETFLN +VPEG SAP
Sbjct: 97  TPKIVKEIGQDLSDFNCGLAHVFLQHTSASLTINENYDPDVQADTETFLNRIVPEGNSAP 156

Query: 516 WKHTIEGSDDMPAHIKSSMFGNNLTIPITDGKLNMGTWQGIWLCEHRDYPTARKVVVTLN 337
           W+HT+EG DDMPAHIKSSMFG  LTIPIT GKLNMGTWQGIWLCEHRD PTAR+VVVTLN
Sbjct: 157 WRHTMEGPDDMPAHIKSSMFGCQLTIPITKGKLNMGTWQGIWLCEHRDAPTARRVVVTLN 216

Query: 336 GI 331
           GI
Sbjct: 217 GI 218


>ref|XP_003529426.1| PREDICTED: UPF0047 protein yjbQ-like [Glycine max]
          Length = 175

 Score =  276 bits (706), Expect = 5e-72
 Identities = 132/167 (79%), Positives = 145/167 (86%)
 Frame = -2

Query: 831 PTRIKSVYTPTTFTDPSSESMASGGPKWAQKTVTLPPLKRGCHLVTSKIVKEIGQDMSGF 652
           P  +++   PT   D  +E      PKWAQKTV+LPPL+RGCHLVTSKIVKEI QD+SGF
Sbjct: 12  PFGVRAQQHPTVKRDSMAECTV---PKWAQKTVSLPPLRRGCHLVTSKIVKEIEQDLSGF 68

Query: 651 KCGLAHLFLQHTSASLTINENYDSDVREDTETFLNSVVPEGRSAPWKHTIEGSDDMPAHI 472
           KCGLAHLFLQHTSASLTINENYDSDVREDTETFLN +VPEG SAPWKHT+EG DDMPAHI
Sbjct: 69  KCGLAHLFLQHTSASLTINENYDSDVREDTETFLNRIVPEGSSAPWKHTLEGPDDMPAHI 128

Query: 471 KSSMFGNNLTIPITDGKLNMGTWQGIWLCEHRDYPTARKVVVTLNGI 331
           KSSMFG  LTIPIT+GKLNMGTWQGIWLCEHRD+PT+R+VVVTLNGI
Sbjct: 129 KSSMFGCTLTIPITNGKLNMGTWQGIWLCEHRDHPTSRRVVVTLNGI 175


>ref|XP_002510758.1| conserved hypothetical protein [Ricinus communis]
           gi|223551459|gb|EEF52945.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 195

 Score =  276 bits (705), Expect = 7e-72
 Identities = 131/168 (77%), Positives = 149/168 (88%), Gaps = 3/168 (1%)
 Frame = -2

Query: 825 RIKSVYT--PTTFTDPSSESMASGGP-KWAQKTVTLPPLKRGCHLVTSKIVKEIGQDMSG 655
           R+ S+YT  P++ T+ S+ SMA+    KWAQKTVTL P +RGCHL+TSKI+ EIG D+S 
Sbjct: 28  RVNSLYTAKPSSLTNDSNNSMATTSTSKWAQKTVTLSPHRRGCHLITSKILNEIGSDLSE 87

Query: 654 FKCGLAHLFLQHTSASLTINENYDSDVREDTETFLNSVVPEGRSAPWKHTIEGSDDMPAH 475
           FKCGLAHLF+QHTSASLTINENYDSDVR+DTETFLN +VPEGRSAPWKHT+EG DDMPAH
Sbjct: 88  FKCGLAHLFIQHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAH 147

Query: 474 IKSSMFGNNLTIPITDGKLNMGTWQGIWLCEHRDYPTARKVVVTLNGI 331
           IKSSMFG  LTIPIT+GKLNMGTWQGIWLCEHRD+PTARKVV+TLNGI
Sbjct: 148 IKSSMFGCQLTIPITNGKLNMGTWQGIWLCEHRDHPTARKVVITLNGI 195


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