BLASTX nr result

ID: Bupleurum21_contig00005621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005621
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40800.1| unknown [Medicago truncatula]                           79   3e-13
gb|ABE11612.1| SWIb domain-containing protein [Solanum chacoense]      79   5e-13
ref|XP_003551777.1| PREDICTED: upstream activation factor subuni...    78   7e-13
ref|NP_001236050.1| uncharacterized protein LOC100527179 [Glycin...    78   7e-13
ref|XP_002277738.1| PREDICTED: upstream activation factor subuni...    74   1e-11

>gb|AFK40800.1| unknown [Medicago truncatula]
          Length = 100

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 34/42 (80%), Positives = 39/42 (92%)
 Frame = +2

Query: 2   DPKNKNIVNCDDKLKSILLGKPQIELAELPVLIKLHFPKEPQ 127
           DP NKN+VNCD+KLK ILLGKPQ++LAELP LIKLHFPKEP+
Sbjct: 59  DPNNKNVVNCDEKLKGILLGKPQVDLAELPALIKLHFPKEPK 100


>gb|ABE11612.1| SWIb domain-containing protein [Solanum chacoense]
          Length = 100

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 33/42 (78%), Positives = 39/42 (92%)
 Frame = +2

Query: 2   DPKNKNIVNCDDKLKSILLGKPQIELAELPVLIKLHFPKEPQ 127
           DP NKN+VNCD+KLKS+LLGKPQ+EL ELP LIKLHFPK+P+
Sbjct: 59  DPNNKNLVNCDEKLKSVLLGKPQVELTELPTLIKLHFPKQPR 100


>ref|XP_003551777.1| PREDICTED: upstream activation factor subunit spp27-like [Glycine
           max]
          Length = 100

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 34/42 (80%), Positives = 39/42 (92%)
 Frame = +2

Query: 2   DPKNKNIVNCDDKLKSILLGKPQIELAELPVLIKLHFPKEPQ 127
           D  NKN+VNCD+KLKSILLGKPQ+ELAELP LIK+HFPKEP+
Sbjct: 59  DQNNKNVVNCDEKLKSILLGKPQVELAELPALIKMHFPKEPK 100


>ref|NP_001236050.1| uncharacterized protein LOC100527179 [Glycine max]
           gi|255631726|gb|ACU16230.1| unknown [Glycine max]
          Length = 100

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 34/42 (80%), Positives = 39/42 (92%)
 Frame = +2

Query: 2   DPKNKNIVNCDDKLKSILLGKPQIELAELPVLIKLHFPKEPQ 127
           D  NKN+VNCD+KLKSILLGKPQ+ELAELP LIK+HFPKEP+
Sbjct: 59  DQNNKNVVNCDEKLKSILLGKPQVELAELPALIKMHFPKEPK 100


>ref|XP_002277738.1| PREDICTED: upstream activation factor subunit UAF30 [Vitis
           vinifera] gi|297737490|emb|CBI26691.3| unnamed protein
           product [Vitis vinifera]
          Length = 100

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 33/40 (82%), Positives = 37/40 (92%)
 Frame = +2

Query: 2   DPKNKNIVNCDDKLKSILLGKPQIELAELPVLIKLHFPKE 121
           DP NKN+V CDDKL+SILLGKP++ELAELP LIKLHFPKE
Sbjct: 59  DPNNKNVVICDDKLRSILLGKPRVELAELPALIKLHFPKE 98


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