BLASTX nr result

ID: Bupleurum21_contig00005612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005612
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34027.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002267374.1| PREDICTED: riboflavin biosynthesis protein r...   116   2e-24
ref|XP_003543930.1| PREDICTED: riboflavin biosynthesis protein r...   115   4e-24
ref|XP_003532604.1| PREDICTED: riboflavin biosynthesis protein r...   112   3e-23
ref|XP_002298707.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23

>emb|CBI34027.3| unnamed protein product [Vitis vinifera]
          Length = 845

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/78 (73%), Positives = 64/78 (82%)
 Frame = +1

Query: 1   VRTMKLMTNNPAKYIGLKGYGLAVSGRVPLVTLITKENKRYLETKREKMGHVYNQGLDSN 180
           VRTMKLMTNNPAKYIGLKGYGLAVSGRVPL+T ITKEN RYLETKR KMGHVY    + +
Sbjct: 763 VRTMKLMTNNPAKYIGLKGYGLAVSGRVPLLTPITKENGRYLETKRSKMGHVYGLEFNGH 822

Query: 181 VSNMITGNGKPSTKETSD 234
           ++N+I+GNGK S     D
Sbjct: 823 LTNLISGNGKQSINTQPD 840


>ref|XP_002267374.1| PREDICTED: riboflavin biosynthesis protein ribBA,
           chloroplastic-like [Vitis vinifera]
          Length = 559

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/78 (73%), Positives = 64/78 (82%)
 Frame = +1

Query: 1   VRTMKLMTNNPAKYIGLKGYGLAVSGRVPLVTLITKENKRYLETKREKMGHVYNQGLDSN 180
           VRTMKLMTNNPAKYIGLKGYGLAVSGRVPL+T ITKEN RYLETKR KMGHVY    + +
Sbjct: 477 VRTMKLMTNNPAKYIGLKGYGLAVSGRVPLLTPITKENGRYLETKRSKMGHVYGLEFNGH 536

Query: 181 VSNMITGNGKPSTKETSD 234
           ++N+I+GNGK S     D
Sbjct: 537 LTNLISGNGKQSINTQPD 554


>ref|XP_003543930.1| PREDICTED: riboflavin biosynthesis protein ribBA,
           chloroplastic-like [Glycine max]
          Length = 550

 Score =  115 bits (288), Expect = 4e-24
 Identities = 53/79 (67%), Positives = 67/79 (84%)
 Frame = +1

Query: 1   VRTMKLMTNNPAKYIGLKGYGLAVSGRVPLVTLITKENKRYLETKREKMGHVYNQGLDSN 180
           VR+MKLMTNNPAKY+GLKGYGL +SGR+PLV+LITKENKRYLETKR KMGHVY    +S 
Sbjct: 468 VRSMKLMTNNPAKYVGLKGYGLTISGRIPLVSLITKENKRYLETKRVKMGHVYGSEFNSK 527

Query: 181 VSNMITGNGKPSTKETSDS 237
           +++  TGNGK ++ + S++
Sbjct: 528 LNHQDTGNGKANSDDDSNA 546


>ref|XP_003532604.1| PREDICTED: riboflavin biosynthesis protein ribBA,
           chloroplastic-like [Glycine max]
          Length = 546

 Score =  112 bits (280), Expect = 3e-23
 Identities = 52/79 (65%), Positives = 66/79 (83%)
 Frame = +1

Query: 1   VRTMKLMTNNPAKYIGLKGYGLAVSGRVPLVTLITKENKRYLETKREKMGHVYNQGLDSN 180
           VR+MKLMTNNPAKY+GLKGYGL +SGR+PLV+LITKENKRYLETKR KMGHVY    +S 
Sbjct: 464 VRSMKLMTNNPAKYVGLKGYGLTISGRIPLVSLITKENKRYLETKRVKMGHVYGSEFNSK 523

Query: 181 VSNMITGNGKPSTKETSDS 237
           ++   +GNGK ++ + S++
Sbjct: 524 LNYQDSGNGKVNSDDDSNA 542


>ref|XP_002298707.1| predicted protein [Populus trichocarpa] gi|222845965|gb|EEE83512.1|
           predicted protein [Populus trichocarpa]
          Length = 552

 Score =  112 bits (280), Expect = 3e-23
 Identities = 53/69 (76%), Positives = 60/69 (86%)
 Frame = +1

Query: 1   VRTMKLMTNNPAKYIGLKGYGLAVSGRVPLVTLITKENKRYLETKREKMGHVYNQGLDSN 180
           VRTMKLMTNNPAKYIGLKGYGLAVSGRVPL+T ITK+NKRYLETKR KMGH+Y    + +
Sbjct: 474 VRTMKLMTNNPAKYIGLKGYGLAVSGRVPLLTPITKDNKRYLETKRAKMGHIYGAEFNGH 533

Query: 181 VSNMITGNG 207
           +SN+I  NG
Sbjct: 534 LSNLINSNG 542


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