BLASTX nr result

ID: Bupleurum21_contig00005592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005592
         (1090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285000.2| PREDICTED: uncharacterized protein LOC100264...   122   2e-25
ref|XP_002515550.1| peptidyl-prolyl cis-trans isomerase, putativ...   114   3e-23
ref|XP_003526420.1| PREDICTED: uncharacterized protein LOC100800...   107   7e-21
ref|XP_003603433.1| Peptidyl-prolyl cis-trans isomerase [Medicag...   105   2e-20
ref|XP_003523694.1| PREDICTED: uncharacterized protein LOC100785...   103   6e-20

>ref|XP_002285000.2| PREDICTED: uncharacterized protein LOC100264514 [Vitis vinifera]
          Length = 796

 Score =  122 bits (305), Expect = 2e-25
 Identities = 63/88 (71%), Positives = 72/88 (81%), Gaps = 3/88 (3%)
 Frame = +3

Query: 273 PIRGHARNSRRSYSRSPVGYGRRARSPYADRARSISRSPSPDGSTKRIRRGRGFSQRYSN 452
           P R  +RN+RRSYSRSP   GRRARSP +DR+R++SRSPSPDGS KRIRRGRGFS+RYS 
Sbjct: 581 PNRVPSRNNRRSYSRSPASSGRRARSPASDRSRTVSRSPSPDGSPKRIRRGRGFSERYSY 640

Query: 453 ARRYH--SSDRSPIRSYRY-GRSERDRY 527
           ARRY   S DRSP+RSYRY  R +RDRY
Sbjct: 641 ARRYRTPSPDRSPVRSYRYNNRIDRDRY 668


>ref|XP_002515550.1| peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
           gi|223545494|gb|EEF46999.1| peptidyl-prolyl cis-trans
           isomerase, putative [Ricinus communis]
          Length = 729

 Score =  114 bits (286), Expect = 3e-23
 Identities = 64/92 (69%), Positives = 71/92 (77%), Gaps = 4/92 (4%)
 Frame = +3

Query: 273 PIRGHARNSRRSYSRS--PVGYGRRARSPYADRARSISRSPSPDGSTKRIRRGRGFSQRY 446
           P+R   RN+RRS+SRS  PV   RRARSP +DR RS+SRS SPDGS KRIRRGRGFS RY
Sbjct: 517 PVRAPCRNNRRSFSRSRSPV---RRARSPPSDR-RSLSRSVSPDGSPKRIRRGRGFSDRY 572

Query: 447 SNARRYH--SSDRSPIRSYRYGRSERDRYQGY 536
           S ARRY   S DRSP+RSYRYGR +RDRY  Y
Sbjct: 573 SYARRYRTPSPDRSPVRSYRYGRGDRDRYSSY 604


>ref|XP_003526420.1| PREDICTED: uncharacterized protein LOC100800303 [Glycine max]
          Length = 850

 Score =  107 bits (266), Expect = 7e-21
 Identities = 57/89 (64%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
 Frame = +3

Query: 273 PIRGHARNSRRSYSRSPVGYGRRARSPYADRARSISRSPSPDGSTKRIRRGRGFSQRYSN 452
           P+R  +R+ RRSYSRSP    RR R+P   R RS+SRS SPD S KRIRRGRGFS+RYS 
Sbjct: 638 PVRAPSRSIRRSYSRSPSPV-RRTRTP---RGRSVSRSVSPDASPKRIRRGRGFSERYSY 693

Query: 453 ARRYHSSDRSPIRSYRY-GRSERDRYQGY 536
           ARRY +  RSP+RSYRY GR++RDRY  Y
Sbjct: 694 ARRYRTPSRSPVRSYRYNGRNDRDRYSSY 722


>ref|XP_003603433.1| Peptidyl-prolyl cis-trans isomerase [Medicago truncatula]
           gi|355492481|gb|AES73684.1| Peptidyl-prolyl cis-trans
           isomerase [Medicago truncatula]
          Length = 943

 Score =  105 bits (262), Expect = 2e-20
 Identities = 57/89 (64%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
 Frame = +3

Query: 273 PIRGHARNSRRSYSRSPVGYGRRARSPYADRARSISRSPSPDGSTKRIRRGRGFSQRYSN 452
           P+R  +RN+RRSYSRSP    RR R+P   R  S+SRS SPD S KRIRRGRGFS+RYS 
Sbjct: 729 PVRAPSRNNRRSYSRSPSPV-RRRRTP---RGGSLSRSASPDASPKRIRRGRGFSERYSY 784

Query: 453 ARRYHSSDRSPIRSYRY-GRSERDRYQGY 536
           ARRY +  RSP+RSYRY GR +RDRY  Y
Sbjct: 785 ARRYRTPSRSPVRSYRYNGRIDRDRYTSY 813


>ref|XP_003523694.1| PREDICTED: uncharacterized protein LOC100785820 [Glycine max]
          Length = 843

 Score =  103 bits (258), Expect = 6e-20
 Identities = 55/89 (61%), Positives = 67/89 (75%), Gaps = 1/89 (1%)
 Frame = +3

Query: 273 PIRGHARNSRRSYSRSPVGYGRRARSPYADRARSISRSPSPDGSTKRIRRGRGFSQRYSN 452
           P+R  +R++RRS+SRSP     R R+P   R RS+SRS SPD S KRIRRGRGFS+RYS 
Sbjct: 639 PVRAPSRSNRRSFSRSPSPV-HRTRTP---RGRSVSRSVSPDASPKRIRRGRGFSERYSY 694

Query: 453 ARRYHSSDRSPIRSYRY-GRSERDRYQGY 536
           ARRY +  RSP+RSYRY GR++RDRY  Y
Sbjct: 695 ARRYRTPSRSPVRSYRYNGRNDRDRYSTY 723


Top