BLASTX nr result

ID: Bupleurum21_contig00005590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005590
         (1220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522618.1| hypothetical protein RCOM_0884570 [Ricinus c...   517   e-144
ref|XP_002323955.1| predicted protein [Populus trichocarpa] gi|2...   514   e-143
ref|XP_002310495.1| predicted protein [Populus trichocarpa] gi|2...   511   e-142
ref|XP_002269380.1| PREDICTED: root phototropism protein 3 [Viti...   511   e-142
emb|CAN60915.1| hypothetical protein VITISV_002200 [Vitis vinifera]   501   e-139

>ref|XP_002522618.1| hypothetical protein RCOM_0884570 [Ricinus communis]
           gi|223538094|gb|EEF39705.1| hypothetical protein
           RCOM_0884570 [Ricinus communis]
          Length = 663

 Score =  517 bits (1332), Expect = e-144
 Identities = 256/309 (82%), Positives = 276/309 (89%)
 Frame = -2

Query: 928 MWDSESESVGHGGRDYDNGVLTTSKDGVKTDGFEQRGQSWFVATDVPSDFLVQIGDVSFH 749
           MWDSESESV   GRDY NGVL+TSK GVKTDGFE +GQSW+VATDVPSD LVQIGDV+FH
Sbjct: 1   MWDSESESVC--GRDYGNGVLSTSKHGVKTDGFELKGQSWYVATDVPSDLLVQIGDVNFH 58

Query: 748 LHKYPLLSRSGKMNRIIYESREVELSKIALDELPGGPEAFELAAKFCYGIAVDLTATNIS 569
           LHKYPLLSRSGKMNR+IYESR+++L+KIALD++PGGPEAFELAAKFCYGIAVDLTA NIS
Sbjct: 59  LHKYPLLSRSGKMNRLIYESRDLDLNKIALDDIPGGPEAFELAAKFCYGIAVDLTAGNIS 118

Query: 568 GLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIQVLKSCEKLSPWAENLQIVR 389
           GLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSI VLKSCEKLSPWAENLQIVR
Sbjct: 119 GLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSILVLKSCEKLSPWAENLQIVR 178

Query: 388 RCSESIAWKACANPKGIRWQYTGKPPKVSSPSWKEMKDSSPSRNQQVPSDWWFEDVSILR 209
           RCSESIAWKACANPKGIRW YTGKPPKVSSP W +MKDSSPSR+Q VP DWWFEDVSILR
Sbjct: 179 RCSESIAWKACANPKGIRWAYTGKPPKVSSPKWNDMKDSSPSRSQPVPPDWWFEDVSILR 238

Query: 208 IDHFVRVINAIKVKGMRYELLGASLTHYAVKWLPGFMKDGSATVLDEXXXXXXXXXXXXS 29
           IDHFVRVI AIKVKGMR+EL+GA++ +YA KWLPG +KDG  +V DE            S
Sbjct: 239 IDHFVRVITAIKVKGMRFELIGAAIMNYAAKWLPGLIKDGVGSV-DE--GSNSSNSSTSS 295

Query: 28  WKGGLHMIV 2
           WKGGLHMIV
Sbjct: 296 WKGGLHMIV 304


>ref|XP_002323955.1| predicted protein [Populus trichocarpa] gi|222866957|gb|EEF04088.1|
           predicted protein [Populus trichocarpa]
          Length = 672

 Score =  514 bits (1325), Expect = e-143
 Identities = 249/309 (80%), Positives = 272/309 (88%)
 Frame = -2

Query: 928 MWDSESESVGHGGRDYDNGVLTTSKDGVKTDGFEQRGQSWFVATDVPSDFLVQIGDVSFH 749
           MWDSESESV   GRDY+NG+L++SK GVK DGFE R  SW+VAT++PSDFLVQ+GDV+FH
Sbjct: 1   MWDSESESVT--GRDYENGILSSSKHGVKNDGFELRDHSWYVATNIPSDFLVQVGDVNFH 58

Query: 748 LHKYPLLSRSGKMNRIIYESREVELSKIALDELPGGPEAFELAAKFCYGIAVDLTATNIS 569
           LHKYPLLSRSGKMNR+IYESR++ L+K+ALD+LPGGPEAFELAAKFCYGIAVDLTA NIS
Sbjct: 59  LHKYPLLSRSGKMNRLIYESRDLGLNKVALDDLPGGPEAFELAAKFCYGIAVDLTAANIS 118

Query: 568 GLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIQVLKSCEKLSPWAENLQIVR 389
           GLRCAAEYLEMTEDLEEGNL FKTEAFLSYVVLSSWRDSI VLKSCEKLSPWAENLQIVR
Sbjct: 119 GLRCAAEYLEMTEDLEEGNLTFKTEAFLSYVVLSSWRDSIVVLKSCEKLSPWAENLQIVR 178

Query: 388 RCSESIAWKACANPKGIRWQYTGKPPKVSSPSWKEMKDSSPSRNQQVPSDWWFEDVSILR 209
           RCSESIAWKACANPKGIRW YTGKPPKVSSP W EMKDSSPSRN QVP DWWFEDVSILR
Sbjct: 179 RCSESIAWKACANPKGIRWAYTGKPPKVSSPKWNEMKDSSPSRNSQVPPDWWFEDVSILR 238

Query: 208 IDHFVRVINAIKVKGMRYELLGASLTHYAVKWLPGFMKDGSATVLDEXXXXXXXXXXXXS 29
           IDHFVRVI AIKVKGMR+EL+GA++ HYA KWLPG +KDG  ++  +            S
Sbjct: 239 IDHFVRVITAIKVKGMRFELIGAAIMHYAGKWLPGLIKDGGGSI--DEASNSSNSSGGSS 296

Query: 28  WKGGLHMIV 2
           WKGGLHMIV
Sbjct: 297 WKGGLHMIV 305


>ref|XP_002310495.1| predicted protein [Populus trichocarpa] gi|222853398|gb|EEE90945.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  511 bits (1315), Expect = e-142
 Identities = 248/312 (79%), Positives = 272/312 (87%), Gaps = 3/312 (0%)
 Frame = -2

Query: 928 MWDSESESVGHGGRDYDNGVLTTSKDGVKTDGFEQRGQSWFVATDVPSDFLVQIGDVSFH 749
           MWDSESESV   GRDY NG+L++SK GV+TDGFEQR  SW+VATD+PSDFLVQ+GDV+FH
Sbjct: 1   MWDSESESVT--GRDYGNGILSSSKHGVETDGFEQRDHSWYVATDIPSDFLVQVGDVNFH 58

Query: 748 LHKYPLLSRSGKMNRIIYESREVELSKIALDELPGGPEAFELAAKFCYGIAVDLTATNIS 569
           LHKYPLLSRSGKMNR+IYESR+++L+K+ALD+LPGGPEAFELAAKFCYGIAVDLTA NIS
Sbjct: 59  LHKYPLLSRSGKMNRLIYESRDLDLNKVALDDLPGGPEAFELAAKFCYGIAVDLTAANIS 118

Query: 568 GLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIQVLKSCEKLSPWAENLQIVR 389
           GLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSI VLKS EKLSPWAENLQIVR
Sbjct: 119 GLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSILVLKSSEKLSPWAENLQIVR 178

Query: 388 RCSESIAWKACANPKGIRWQYTGKPPKVSSPSWKEMKDSSPSRNQQVPSDWWFEDVSILR 209
           RCSESIAWKACANPKGIRW YTGKPPKVSSP W EMKDSSPSRN QVP DWWFEDVSILR
Sbjct: 179 RCSESIAWKACANPKGIRWAYTGKPPKVSSPKWNEMKDSSPSRNSQVPPDWWFEDVSILR 238

Query: 208 IDHFVRVINAIKVKGMRYELLGASLTHYAVKWLPGFMKDGSATV---LDEXXXXXXXXXX 38
           IDHFVRV+ AIKVKGMR+EL GA++ HYA KWLPG +++G   +    +           
Sbjct: 239 IDHFVRVVTAIKVKGMRFELTGAAIVHYAGKWLPGLIQNGGGFIDEASNSSNSNSSSSSG 298

Query: 37  XXSWKGGLHMIV 2
             SWKGGLHMIV
Sbjct: 299 GISWKGGLHMIV 310


>ref|XP_002269380.1| PREDICTED: root phototropism protein 3 [Vitis vinifera]
          Length = 674

 Score =  511 bits (1315), Expect = e-142
 Identities = 252/310 (81%), Positives = 268/310 (86%), Gaps = 1/310 (0%)
 Frame = -2

Query: 928 MWDSESESVGHGGRDYDNGVLTTSKDGVKTDGFEQRGQSWFVATDVPSDFLVQIGDVSFH 749
           MW+S+SE VG  GRDY NGVL +SK GVK DGFE RGQSW+VATD+PSDFLVQIGDVSFH
Sbjct: 1   MWESDSELVG--GRDYGNGVLGSSKHGVKNDGFELRGQSWYVATDIPSDFLVQIGDVSFH 58

Query: 748 LHKYPLLSRSGKMNRIIYESREVELSKIALDELPGGPEAFELAAKFCYGIAVDLTATNIS 569
           LHKYPLLSRSGKMNRIIYES   +L+KIA D+LPGGPEAFELAAKFCYGIAVDLTA NIS
Sbjct: 59  LHKYPLLSRSGKMNRIIYESHNADLNKIAFDDLPGGPEAFELAAKFCYGIAVDLTAANIS 118

Query: 568 GLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIQVLKSCEKLSPWAENLQIVR 389
           GLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSI VLKSCEKLSPWAENLQIVR
Sbjct: 119 GLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIIVLKSCEKLSPWAENLQIVR 178

Query: 388 RCSESIAWKACANPKGIRWQYTGKPPKVSSPSWKEMKDSSPSRNQQVPSDWWFEDVSILR 209
           RCSESIAWKACANPKGI+W YTGKP KVSSP W EMKDSSPSR QQVP DWWFEDVSILR
Sbjct: 179 RCSESIAWKACANPKGIKWAYTGKPLKVSSPKWNEMKDSSPSRGQQVPPDWWFEDVSILR 238

Query: 208 IDHFVRVINAIKVKGMRYELLGASLTHYAVKWLPGFMKDGSATVL-DEXXXXXXXXXXXX 32
           IDHFVRVI AIKVKGMR+EL+GAS+  YA KWLPG +K+G  T + DE            
Sbjct: 239 IDHFVRVITAIKVKGMRFELIGASIMQYATKWLPGLIKEGMGTGMGDEGSNSSNGSSGSS 298

Query: 31  SWKGGLHMIV 2
           SWKGGL M+V
Sbjct: 299 SWKGGLQMVV 308


>emb|CAN60915.1| hypothetical protein VITISV_002200 [Vitis vinifera]
          Length = 665

 Score =  501 bits (1291), Expect = e-139
 Identities = 249/309 (80%), Positives = 264/309 (85%)
 Frame = -2

Query: 928 MWDSESESVGHGGRDYDNGVLTTSKDGVKTDGFEQRGQSWFVATDVPSDFLVQIGDVSFH 749
           MW+S+SE VG  GRDY NGVL +SK GVK DGFE RGQSW+VATD+PSDFLVQIGDVSFH
Sbjct: 1   MWESDSELVG--GRDYGNGVLGSSKHGVKNDGFELRGQSWYVATDIPSDFLVQIGDVSFH 58

Query: 748 LHKYPLLSRSGKMNRIIYESREVELSKIALDELPGGPEAFELAAKFCYGIAVDLTATNIS 569
           LHKYPLLSRSGKMNRIIYES   +L+KIA D+LPGGPEAFELAAKFCYGIAVDLTA NIS
Sbjct: 59  LHKYPLLSRSGKMNRIIYESHNADLNKIAFDDLPGGPEAFELAAKFCYGIAVDLTAANIS 118

Query: 568 GLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIQVLKSCEKLSPWAENLQIVR 389
           GLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSI VLKSCEKLSPWAENLQIVR
Sbjct: 119 GLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIIVLKSCEKLSPWAENLQIVR 178

Query: 388 RCSESIAWKACANPKGIRWQYTGKPPKVSSPSWKEMKDSSPSRNQQVPSDWWFEDVSILR 209
           RCSESIAWKACANPKGI+W YTGKP KVSSP W EMKDSSPSR QQVP DWWFEDVSILR
Sbjct: 179 RCSESIAWKACANPKGIKWAYTGKPLKVSSPKWNEMKDSSPSRGQQVPPDWWFEDVSILR 238

Query: 208 IDHFVRVINAIKVKGMRYELLGASLTHYAVKWLPGFMKDGSATVLDEXXXXXXXXXXXXS 29
           IDHFVRVI AIKVKGMR+EL+GAS+  YA KWLPG   +GS +                S
Sbjct: 239 IDHFVRVITAIKVKGMRFELIGASIMQYATKWLPGMGDEGSNS--------SNGSSGSSS 290

Query: 28  WKGGLHMIV 2
           WKGGL M+V
Sbjct: 291 WKGGLQMVV 299


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