BLASTX nr result

ID: Bupleurum21_contig00005589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005589
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270401.1| PREDICTED: uncharacterized protein LOC100242...   112   2e-23
ref|XP_002304587.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002297932.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
emb|CAN76562.1| hypothetical protein VITISV_010091 [Vitis vinifera]    62   4e-08
gb|AFW67466.1| hypothetical protein ZEAMMB73_148709 [Zea mays]         57   2e-06

>ref|XP_002270401.1| PREDICTED: uncharacterized protein LOC100242682 [Vitis vinifera]
           gi|302143265|emb|CBI20560.3| unnamed protein product
           [Vitis vinifera]
          Length = 382

 Score =  112 bits (281), Expect = 2e-23
 Identities = 62/126 (49%), Positives = 82/126 (65%), Gaps = 3/126 (2%)
 Frame = -2

Query: 389 WVSSSSYDTNACMPELGLLLFDATKLEKDLVEAILWWSRVLN--SKKSP-NPAIALALWS 219
           W+S + Y   ACMP+  +LL D  KL+KDLVEAILWWS+VLN   + SP NPAIALAL  
Sbjct: 259 WISGTPYAMKACMPDSSILLIDPRKLDKDLVEAILWWSKVLNWSERSSPKNPAIALALHG 318

Query: 218 RHEKLSSSWKLCNYRSAEIETDSLVLRYGQEENVCTSFSSGTISQTYIKDIMNTYLPPQS 39
           R+ KLSSSW L + R      + +++ Y    N+C+ F +G  SQ+   +I   YLPP +
Sbjct: 319 RYSKLSSSWLLGHSRRG-TGKEIMIIPYDGPTNMCSGFGNGP-SQSVPGNIWKQYLPPMA 376

Query: 38  DRILGN 21
           DRILG+
Sbjct: 377 DRILGS 382


>ref|XP_002304587.1| predicted protein [Populus trichocarpa] gi|222842019|gb|EEE79566.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 49/126 (38%), Positives = 80/126 (63%), Gaps = 3/126 (2%)
 Frame = -2

Query: 389 WVSSSSYDTNACMPELGLLLFDATKLEKDLVEAILWWSRVLNSKK---SPNPAIALALWS 219
           WVS + Y  + C+P+  +L+ +A KLEKD VE +LWWS+ LN ++     N A+ALAL++
Sbjct: 255 WVSETPYAKDFCLPDFSVLVINARKLEKDFVEIVLWWSKALNLRERTNKKNVAVALALYN 314

Query: 218 RHEKLSSSWKLCNYRSAEIETDSLVLRYGQEENVCTSFSSGTISQTYIKDIMNTYLPPQS 39
            + KLSSSW + ++ S+++  +S+++ Y   +  C    +GT S+    ++   YLP  S
Sbjct: 315 SYLKLSSSWLVKDFSSSQV-NNSMIIHYDGPKTSCKESINGTASEYSHGNVWTRYLPSTS 373

Query: 38  DRILGN 21
           DRILG+
Sbjct: 374 DRILGS 379


>ref|XP_002297932.1| predicted protein [Populus trichocarpa] gi|222845190|gb|EEE82737.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 51/126 (40%), Positives = 79/126 (62%), Gaps = 3/126 (2%)
 Frame = -2

Query: 389 WVSSSSYDTNACMPELGLLLFDATKLEKDLVEAILWWSRVLNSKK---SPNPAIALALWS 219
           WVS + Y  + C+P+L +L+ +A KL KD+VE +LWWS+ LN ++     N A+ALAL++
Sbjct: 263 WVSETPYAKDTCLPDLSVLVINARKLGKDIVETVLWWSKALNLRERTDQKNLALALALYN 322

Query: 218 RHEKLSSSWKLCNYRSAEIETDSLVLRYGQEENVCTSFSSGTISQTYIKDIMNTYLPPQS 39
           R+ KLSSSW + +  S E+  +S+++ Y   +  C    SG  S+    ++   YLP  S
Sbjct: 323 RYLKLSSSWLVKDITSPEV-NNSMIIYYDGPKTSCIKSISGAASEYSHGNVWTQYLPSIS 381

Query: 38  DRILGN 21
           DRILG+
Sbjct: 382 DRILGS 387


>emb|CAN76562.1| hypothetical protein VITISV_010091 [Vitis vinifera]
          Length = 838

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = -2

Query: 389 WVSSSSYDTNACMPELGLLLFDATKLEKDLVEAILWWSRVLN 264
           W+S + Y   ACMP+  +LL D  KL+KDLVEAILWWS+VLN
Sbjct: 754 WISGTPYAMKACMPDSSILLIDPRKLDKDLVEAILWWSKVLN 795


>gb|AFW67466.1| hypothetical protein ZEAMMB73_148709 [Zea mays]
          Length = 382

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
 Frame = -2

Query: 389 WVSSSSYDTNACMPELGLLLFDATKLEKDLVEAILWWS---RVLNSKKSPNPAIALALWS 219
           WV    Y+ +AC+ +  +LL +  KLEK L+ +I+WW+   R+ N +     A+ L+   
Sbjct: 264 WVPKEPYNEDACLLDFDVLLMEPRKLEKTLITSIMWWADAIRLANQRDLIRLAVTLSFNG 323

Query: 218 RHEKLSSSWKLCNYRSAEIETDSLVLRYGQEENVCT 111
           ++ +L S+WK  +  +A+I      L +   +NVC+
Sbjct: 324 KYTRLPSNWKRADDDNADI------LNFDGPKNVCS 353


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