BLASTX nr result

ID: Bupleurum21_contig00005580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005580
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234576.1| TCP transcription factor 10 [Solanum lycoper...   173   7e-41
ref|XP_003543311.1| PREDICTED: transcription factor TCP4-like [G...   168   2e-39
gb|ACU20384.1| unknown [Glycine max]                                  168   2e-39
ref|XP_003540389.1| PREDICTED: transcription factor TCP4-like [G...   166   6e-39
ref|XP_003636092.1| Transcription factor PCF5 [Medicago truncatu...   166   1e-38

>ref|NP_001234576.1| TCP transcription factor 10 [Solanum lycopersicum]
           gi|306416831|gb|ADM87259.1| TCP transcription factor 10
           [Solanum lycopersicum]
          Length = 313

 Score =  173 bits (438), Expect = 7e-41
 Identities = 86/102 (84%), Positives = 87/102 (85%), Gaps = 5/102 (4%)
 Frame = -3

Query: 996 GEIVQVEGGHILRSTGRKDRHSKVYTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKA 817
           GEIVQVEGGHILRSTGRKDRHSKVYTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKA
Sbjct: 8   GEIVQVEGGHILRSTGRKDRHSKVYTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKA 67

Query: 816 VDWLINKAKNAIDKLEELPPWNPMD-----TSTTTAVLNQNP 706
           VDWLI KAKNAIDKL+ELPPWNP       T     VL Q P
Sbjct: 68  VDWLIKKAKNAIDKLDELPPWNPNQIPGNTTEADALVLKQQP 109


>ref|XP_003543311.1| PREDICTED: transcription factor TCP4-like [Glycine max]
          Length = 344

 Score =  168 bits (426), Expect = 2e-39
 Identities = 80/96 (83%), Positives = 85/96 (88%)
 Frame = -3

Query: 996 GEIVQVEGGHILRSTGRKDRHSKVYTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKA 817
           GEIVQV+GGHI+RSTGRKDRHSKVYTAKGPRDRRVRL+AHTAIQFYDVQDRLGYDRPSKA
Sbjct: 8   GEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKA 67

Query: 816 VDWLINKAKNAIDKLEELPPWNPMDTSTTTAVLNQN 709
           VDWLI KAKNAIDKL ELPPW+P   +T     N N
Sbjct: 68  VDWLIKKAKNAIDKLAELPPWHPNPNTTAADAENNN 103



 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 56/177 (31%), Positives = 82/177 (46%), Gaps = 13/177 (7%)
 Frame = -1

Query: 572 HDDH--------PIDDSMKSFFPTSSGT---NYHNYPGDIIHRGSMQNNPQDLCLSLQSL 426
           HD+H        PID    +FFPT++ T   N+  YP DII R +  N+ +DL LSL S 
Sbjct: 135 HDNHHHSAFIPSPIDTDAIAFFPTTTATSSINFQTYPPDIISRTN--NSTEDLGLSLHSF 192

Query: 425 QEDLNNSVXXXXXXXXXXXXXXXQGLYNSGGGPSHEVNYARMVSW--DGEIKPGGGGYYF 252
           Q D                    Q L++       E NY R+V+W  D        G+  
Sbjct: 193 Q-DPGLIHHGQSQAGANQTPSNDQTLFSGSTQVGFEANYPRIVTWNSDASTDMNRTGFMV 251

Query: 251 NSHTMTMPQPQMISTTTAFTHEISREPLQSSSFSPYVRAWNDLPFPAAATSNHNNTQ 81
           NS +  + Q      + A++    R  LQSS FSP +R W+D+P   A++ +H+ +Q
Sbjct: 252 NSPSALLGQ----GGSAAYSQ---RGTLQSS-FSPSLRPWSDIPM--ASSEHHHKSQ 298


>gb|ACU20384.1| unknown [Glycine max]
          Length = 112

 Score =  168 bits (426), Expect = 2e-39
 Identities = 80/96 (83%), Positives = 85/96 (88%)
 Frame = -3

Query: 996 GEIVQVEGGHILRSTGRKDRHSKVYTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKA 817
           GEIVQV+GGHI+RSTGRKDRHSKVYTAKGPRDRRVRL+AHTAIQFYDVQDRLGYDRPSKA
Sbjct: 8   GEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKA 67

Query: 816 VDWLINKAKNAIDKLEELPPWNPMDTSTTTAVLNQN 709
           VDWLI KAKNAIDKL ELPPW+P   +T     N N
Sbjct: 68  VDWLIKKAKNAIDKLAELPPWHPNPNTTAADAENNN 103


>ref|XP_003540389.1| PREDICTED: transcription factor TCP4-like [Glycine max]
          Length = 343

 Score =  166 bits (421), Expect = 6e-39
 Identities = 79/96 (82%), Positives = 85/96 (88%)
 Frame = -3

Query: 996 GEIVQVEGGHILRSTGRKDRHSKVYTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKA 817
           GEIVQV+GGHI+RSTGRKDRHSKVYTAKGPRDRRVRL+AHTAI+FYDVQDRLGYDRPSKA
Sbjct: 8   GEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKA 67

Query: 816 VDWLINKAKNAIDKLEELPPWNPMDTSTTTAVLNQN 709
           VDWLI KAKNAIDKL ELPPW+P   +   A  N N
Sbjct: 68  VDWLIKKAKNAIDKLGELPPWHPTPNTAADAENNNN 103



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 58/180 (32%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
 Frame = -1

Query: 572 HDDH-------PIDDSMKSFFPTSSGT---NYHNYPGDIIHRGSMQNNPQDLCLSLQSLQ 423
           HD+H       PID    +FFPT++ T   N+  YP +II R +  N+ +DL LSL S Q
Sbjct: 136 HDNHHSAFIPSPIDTDAIAFFPTTTATSSINFQTYPPNIISRTN--NSTEDLGLSLHSFQ 193

Query: 422 EDLNNSVXXXXXXXXXXXXXXXQGLYNSGGGPSHEVNYARMVSW--DGEIKPGGGGYYFN 249
           +                     Q L++       E NY R+V+W  D  I     G+  N
Sbjct: 194 DPGLIHGQTQAGANQTQTPSNDQSLFSGSTQVGFEANYPRIVTWNSDASIDMNRTGFMVN 253

Query: 248 SHTMTMPQPQMIST--TTAFTHEISREPLQSSSFSPYVRAWNDLPFPAAATSNHNNTQPI 75
           S       P ++    + AF+    R  LQSS FSP +R W+++P    A+S H+ +QPI
Sbjct: 254 S-------PALLGQGGSAAFSQ---RGTLQSS-FSPSLRPWSEIPM---ASSEHHKSQPI 299


>ref|XP_003636092.1| Transcription factor PCF5 [Medicago truncatula]
           gi|355502027|gb|AES83230.1| Transcription factor PCF5
           [Medicago truncatula]
          Length = 329

 Score =  166 bits (419), Expect = 1e-38
 Identities = 76/88 (86%), Positives = 85/88 (96%)
 Frame = -3

Query: 996 GEIVQVEGGHILRSTGRKDRHSKVYTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKA 817
           GEIVQV+GGHI+R+TGRKDRHSKVYTAKGPRDRRVRL+AHTAIQFYDVQDRLGYDRPSKA
Sbjct: 8   GEIVQVQGGHIVRATGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKA 67

Query: 816 VDWLINKAKNAIDKLEELPPWNPMDTST 733
           VDWLI KAK+AIDKL++LPPWNP+  +T
Sbjct: 68  VDWLIKKAKSAIDKLDQLPPWNPIPNAT 95



 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 53/167 (31%), Positives = 79/167 (47%), Gaps = 5/167 (2%)
 Frame = -1

Query: 557 IDDSMKSFFPTSS---GTNYHNYPGDIIHRGSMQNNPQDLCLSLQSLQEDLNNSVXXXXX 387
           ID+   +FFPT+S     N+ +Y  DII R +  N+ QDL LSL S Q++  ++      
Sbjct: 146 IDNDAIAFFPTTSVGESMNFQSYSSDIISRTN--NSTQDLGLSLHSFQDNSASN------ 197

Query: 386 XXXXXXXXXXQGLYNSGGGPSHEVNYARMVSWDGEIKPGGGGYYFNSHTMTMPQPQMIST 207
                     Q L++       + NY R+V+W+        G+  NS       P  +  
Sbjct: 198 ---------DQTLFSGSNPVGFDANYNRIVNWN-TADMNRTGFMVNS-------PAFLGQ 240

Query: 206 TTAFTHEISREPLQSSSFSPYVRAWNDLPFPAAATSNHN--NTQPIH 72
            + F+    R  LQSS FSP +R WND+P   A+  +HN  + Q IH
Sbjct: 241 GSTFSAH--RGTLQSS-FSPSLRPWNDIPIADASVDHHNHKSQQQIH 284


Top