BLASTX nr result

ID: Bupleurum21_contig00005555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005555
         (1421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAH58100.1| Dof zinc finger protein [Ipomoea batatas]             295   3e-77
gb|ADL36682.1| DOF domain class transcription factor [Malus x do...   287   5e-75
ref|XP_002281994.1| PREDICTED: dof zinc finger protein DOF3.3-li...   276   7e-72
emb|CAN79859.1| hypothetical protein VITISV_035904 [Vitis vinifera]   275   2e-71
gb|AEM97871.1| DOF domain class transcription factor [Corylus he...   274   4e-71

>dbj|BAH58100.1| Dof zinc finger protein [Ipomoea batatas]
          Length = 497

 Score =  295 bits (754), Expect = 3e-77
 Identities = 169/320 (52%), Positives = 201/320 (62%), Gaps = 8/320 (2%)
 Frame = +1

Query: 1    SCQRYWTAGGTMRNMPVGAGRRKNKSSDSHCRQMIVSVALRAAGIDASNGIQNAAIKNNE 180
            SCQRYWTAGGTMRN+PVGAGRRKNK+S SHCR + ++ AL+AA IDA NG  +   K N 
Sbjct: 179  SCQRYWTAGGTMRNVPVGAGRRKNKNSASHCRHITITEALQAARIDAPNGFHHPTYKPNG 238

Query: 181  TVLSFGADSPLGEPLPSVLSIPEKRVSSSIRSGL--HKQGISIPCKGGEHFDDCSSGSSI 354
            TVLSFG +SPL E + S+L++ +K+V + +R+G   H+QG S P K GE+ DDCSS SS+
Sbjct: 239  TVLSFGPESPLCESMASLLNLADKKVPNGMRNGFYKHEQGNS-PNKVGENGDDCSSVSSV 297

Query: 355  KKPNSKIEGKKDGTAELKEQNSHSFSSQVPFHHALPWPCPWNSTVXXXXXXXXXXXXXXX 534
               +S   GK     E    N + F + VP    +PWP PWN+ V               
Sbjct: 298  TTTSSAAGGKYP-PQEAVMPNINGFPTPVPCLPGVPWPFPWNAAVPLPAICPPGFPMPFC 356

Query: 535  XXXXWNYNVPGSWNLPWLPPPPQVTNQDAQIYGSKLQVLGKHSREGDLLRPVNIEDKEHC 714
                WN  VPG W+LPWL PP    NQ      S    LGKHSREG+LL P N E KE  
Sbjct: 357  PAPYWNCAVPGPWSLPWLAPPSPTANQKTS-SSSPNSPLGKHSREGELLTPNNPEAKESS 415

Query: 715  EQNNSETSVVVPKILRIDDLDEAAKGSIFASLGINNDSIS-----KAFQPKKDEKNHVKP 879
            EQ  S  SV+VPK LRIDD DEAAK SI+++LGI  DSIS     KA QPK DEKNH   
Sbjct: 416  EQKRSGNSVLVPKTLRIDDPDEAAKSSIWSTLGIKYDSISRGGLFKALQPKSDEKNHTAT 475

Query: 880  SPS-LQANPAAMSRSLRFQE 936
             PS LQANPAA+SRSL FQE
Sbjct: 476  PPSALQANPAALSRSLSFQE 495


>gb|ADL36682.1| DOF domain class transcription factor [Malus x domestica]
          Length = 465

 Score =  287 bits (734), Expect = 5e-75
 Identities = 158/321 (49%), Positives = 198/321 (61%), Gaps = 9/321 (2%)
 Frame = +1

Query: 1    SCQRYWTAGGTMRNMPVGAGRRKNKSSDSHCRQMIVSVALRAAGIDASNGIQNAAIKNNE 180
            +CQRYWTAGGTMRN+PVGAGRRKNK+S SH R   ++ AL+AA IDA NG  + A+K+N 
Sbjct: 157  ACQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHFTITEALQAARIDAPNGAHHPALKSNG 216

Query: 181  TVLSFGADSPLGEPLPSVLSIPEKRVSSSIRSGLHK---QGISIPCKGGEHFDDCSSGSS 351
             VLSFG D P+ +P+ SVL++ +K VSSS R+GLHK   Q    PCK  E+ DD SS SS
Sbjct: 217  RVLSFGVDVPICDPMASVLNLADKNVSSSTRNGLHKGEEQVFRAPCKSRENGDDSSSASS 276

Query: 352  IKKPNSKIEGKKDGTAELKEQNSHSFSSQVPFHHALPWPCPWNSTVXXXXXXXXXXXXXX 531
            +      +             N + FSSQ+P    +PWP PWN+ V              
Sbjct: 277  VNVSKPHL------------VNVNGFSSQIPCLPGVPWPYPWNAAVPPPAFCPPGFPLSF 324

Query: 532  XXXXXWNYNVPGSWNLPWLPPPPQVTNQDAQIYGSKLQVLGKHSREGDLLRPVNIEDKEH 711
                 WN  VPG+WN+PW  P P   NQ +    S    LGKHSR+ D++RP N+E +E 
Sbjct: 325  CAAPYWNCGVPGTWNVPWFGPQPATPNQKSPHSSSNSPTLGKHSRDEDVVRPENLEKEEP 384

Query: 712  CEQNNSETSVVVPKILRIDDLDEAAKGSIFASLGINNDSIS-----KAFQPKKDEKNHV- 873
              Q N    V+VPK LRIDD  EAAK SI+A+LGI NDSIS     KAFQPK D+K  V 
Sbjct: 385  SRQKNG--CVLVPKTLRIDDPSEAAKSSIWATLGIKNDSISGKGLFKAFQPKSDQKKTVP 442

Query: 874  KPSPSLQANPAAMSRSLRFQE 936
            + SP+++ANPAA+SRSL F E
Sbjct: 443  ETSPAMRANPAALSRSLNFHE 463


>ref|XP_002281994.1| PREDICTED: dof zinc finger protein DOF3.3-like [Vitis vinifera]
          Length = 473

 Score =  276 bits (707), Expect = 7e-72
 Identities = 153/324 (47%), Positives = 198/324 (61%), Gaps = 12/324 (3%)
 Frame = +1

Query: 1    SCQRYWTAGGTMRNMPVGAGRRKNKSSDSHCRQMIVSVALRAAGIDASNGIQNAAIKNNE 180
            SCQRYWTAGGTMRN+PVGAGRRKNK+S SH R + +S AL+   I+A+NG+    +K+N 
Sbjct: 150  SCQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITISEALQTVRIEATNGVHQPTLKSNG 209

Query: 181  TVLSFGADSPLGEPLPSVLSIPEKRVSSSIRSGLH---KQGISIPCKGGEHFDDCSSGSS 351
            TVL+FG+D+P  + + SVL++ EK++ +  R+G H   +QGI +  +  E+ DD SS SS
Sbjct: 210  TVLTFGSDAPFCDSMTSVLNLEEKKMPNGARNGFHTHEEQGIPVSFRVQENGDDHSSASS 269

Query: 352  IKKPNSKIEGKKDGTAELKEQNSHSFSSQVPFHHALPWPCPWNSTVXXXXXXXXXXXXXX 531
            I   NS  EG K G  E K +NSH   S++P    +PWP PWNS V              
Sbjct: 270  ITVSNSSEEGSKYGLHEAK-RNSHGVPSRIPCIPGIPWPYPWNSAV-PPPFCPPGFPMPF 327

Query: 532  XXXXXWNYNVPGSWNLPWLPPPPQVTNQDAQIYGSKLQVLGKHSREGDLLRPVNIEDKEH 711
                 WN +V   WN+PWL PP    NQ           LGKHSREGD+L+P  +ED+E 
Sbjct: 328  YPAAYWNCHVTAPWNIPWLSPPSSSANQKTPNSRQNSPTLGKHSREGDILKPSIVEDEET 387

Query: 712  CEQNNSETSVVVPKILRIDDLDEAAKGSIFASLGINNDSIS--------KAFQPKKDEKN 867
             +Q +SE  + VPK LRIDD  EAAK SI+ +LGI ND +          AF  K D+KN
Sbjct: 388  PKQRSSERCLWVPKTLRIDDPAEAAKSSIWTTLGIKNDKVDSVSGGGLFNAFHLKGDDKN 447

Query: 868  H-VKPSPSLQANPAAMSRSLRFQE 936
            H +  S  L+ANPAA+SRSL FQE
Sbjct: 448  HAIDTSAVLRANPAALSRSLNFQE 471


>emb|CAN79859.1| hypothetical protein VITISV_035904 [Vitis vinifera]
          Length = 473

 Score =  275 bits (704), Expect = 2e-71
 Identities = 153/324 (47%), Positives = 198/324 (61%), Gaps = 12/324 (3%)
 Frame = +1

Query: 1    SCQRYWTAGGTMRNMPVGAGRRKNKSSDSHCRQMIVSVALRAAGIDASNGIQNAAIKNNE 180
            SCQRYWTAGGTMRN+PVGAGRRKNK+S SH R + +S AL+   I+A+NG+    +K+N 
Sbjct: 150  SCQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITISEALQTVQIEATNGVHQPTLKSNG 209

Query: 181  TVLSFGADSPLGEPLPSVLSIPEKRVSSSIRSGLH---KQGISIPCKGGEHFDDCSSGSS 351
            TVL+FG+D+P  + + SVL++ EK++ +  R+G H   +QGI +  +  E+ DD SS SS
Sbjct: 210  TVLTFGSDAPFCDSMTSVLNLEEKKMPNGARNGFHTHKEQGIPVSFRVQENGDDHSSASS 269

Query: 352  IKKPNSKIEGKKDGTAELKEQNSHSFSSQVPFHHALPWPCPWNSTVXXXXXXXXXXXXXX 531
            I   NS  EG K G  E K +NSH   S++P    +PWP PWNS V              
Sbjct: 270  ITVSNSSEEGSKYGLHEAK-RNSHGVPSRIPCIPGIPWPYPWNSAV-PPPFCPPGFPMPF 327

Query: 532  XXXXXWNYNVPGSWNLPWLPPPPQVTNQDAQIYGSKLQVLGKHSREGDLLRPVNIEDKEH 711
                 WN +V   WN+PWL PP    NQ           LGKHSREGD+L+P  +ED+E 
Sbjct: 328  YPAAYWNCHVTAPWNIPWLSPPSSSANQKTPNSRQNSPTLGKHSREGDILKPSIVEDEET 387

Query: 712  CEQNNSETSVVVPKILRIDDLDEAAKGSIFASLGINNDSIS--------KAFQPKKDEKN 867
             +Q +SE  + VPK LRIDD  EAAK SI+ +LGI ND +          AF  K D+KN
Sbjct: 388  PKQRSSERCLWVPKTLRIDDPAEAAKSSIWTTLGIXNDKVDSVSGGGLFNAFHLKGDDKN 447

Query: 868  H-VKPSPSLQANPAAMSRSLRFQE 936
            H +  S  L+ANPAA+SRSL FQE
Sbjct: 448  HAMDTSAVLRANPAALSRSLNFQE 471


>gb|AEM97871.1| DOF domain class transcription factor [Corylus heterophylla]
          Length = 471

 Score =  274 bits (701), Expect = 4e-71
 Identities = 154/321 (47%), Positives = 199/321 (61%), Gaps = 9/321 (2%)
 Frame = +1

Query: 1    SCQRYWTAGGTMRNMPVGAGRRKNKSSDSHCRQMIVSVALRAAGIDASNGIQNAAIKNNE 180
            +CQRYWTAGGTMRN+PVGAGRRKNK+S SH RQ+ +S AL+ A +DASNG     +K+N 
Sbjct: 152  ACQRYWTAGGTMRNVPVGAGRRKNKNSASHYRQITISDALQVARMDASNGTHYPTLKSNG 211

Query: 181  TVLSFGADSPLGEPLPSVLSIPEKRVSSSIRSGLH---KQGISIPCKGGEHFDDCSSGSS 351
             VLSFG D P+ + + SVLS+ +K+V +  ++G H   +Q I +P KG E+ DDCSSGSS
Sbjct: 212  RVLSFGLDVPICDSMASVLSLADKKVLNGAQNGFHSFEEQRIPVPGKGRENGDDCSSGSS 271

Query: 352  IKKPNSKIEGKKDGTAELKEQNSHSFSSQVPFHHALPWPCPWNSTVXXXXXXXXXXXXXX 531
                ++ +EG K    E   QN + F  Q+P    +PWP  WNS V              
Sbjct: 272  NITVSNSMEGGKHCPPEPFAQNINGFPPQIPCLPGVPWPYQWNSAVPPPALCPPGFPMPF 331

Query: 532  XXXXXWNYNVPGSWNLPWLPPPPQVTNQDAQIYGSKLQVLGKHSREGDLLRPVNIEDKEH 711
                 WN  VPG+WN+PWL P P   NQ +         LGKH R+GD+L+P N+E +E 
Sbjct: 332  YPTAYWNCGVPGTWNVPWLSPQPS-PNQKSPSSAPHSPTLGKHPRDGDMLKPDNLEREEP 390

Query: 712  CEQNNSETSVVVPKILRIDDLDEAAKGSIFASLGINNDSIS-----KAFQPKKDEKNHV- 873
             +Q N    ++VPK LRIDD  EAAK SI+A+LGI N+SI      KAFQ K DEK+ + 
Sbjct: 391  PKQKNG--CILVPKTLRIDDPSEAAKSSIWATLGIKNESICGGGMFKAFQSKGDEKHRIA 448

Query: 874  KPSPSLQANPAAMSRSLRFQE 936
            + S  L ANPAA+SRSL F E
Sbjct: 449  ETSAVLLANPAALSRSLNFHE 469


Top