BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005553
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200326.2| uncharacterized protein [Arabidopsis thaliana] ...    65   7e-09
ref|XP_002866078.1| F-box family protein [Arabidopsis lyrata sub...    64   2e-08
emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]    60   1e-07
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    60   2e-07
dbj|BAB08584.1| unnamed protein product [Arabidopsis thaliana]         60   2e-07

>ref|NP_200326.2| uncharacterized protein [Arabidopsis thaliana]
           gi|142991284|sp|Q9FLP7.2|FB294_ARATH RecName:
           Full=Putative F-box protein At5g55150
           gi|332009209|gb|AED96592.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 360

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
 Frame = +2

Query: 5   PLSRHEIKLPPMLTFSIQYEYHED---CPPEESSDRFVRKAAISSNILKNNTTVNSYHHN 175
           P+++    LPP+++F       +     P  E+   F++KA  S+++L +          
Sbjct: 103 PVTKSVTSLPPLISFEDVQRLLQSQAIIPDSEALKNFIKKAVSSTSLLDDEW-------- 154

Query: 176 TPPIVMTIYGECGYLGFTKLGDKVWTDVNVPSCNFDDIIYHNGNFYAVDPRGEVYVC 346
              +V+ IY     L F + GDK WTD+   + + DDI++ NG F+A+D  GE+Y C
Sbjct: 155 ---VVLVIYNTDRKLAFCRRGDKQWTDLESVASSVDDIVFCNGVFFAIDRLGEIYHC 208


>ref|XP_002866078.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311913|gb|EFH42337.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 375

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
 Frame = +2

Query: 2   HPLSRHEIKLPPMLTFS-IQYEYHEDC--PPEESSDRFVRKAAISSNILKNNTTVNSYHH 172
           +P ++    LPP+++F  +Q         P  E+   FV+KA  S+++L +         
Sbjct: 114 NPFTKSVTSLPPLISFEDVQRLLQSQAIFPDSEALKNFVKKAVSSTSLLDDEW------- 166

Query: 173 NTPPIVMTIYGECGYLGFTKLGDKVWTDVNVPSCNFDDIIYHNGNFYAVDPRGEVYVC 346
               +V+ IY     L F + GDK WTD+   +   DDI++ NG F+A+D  GE+Y C
Sbjct: 167 ----VVLVIYNTDRKLAFCRRGDKQWTDLESVASAVDDIVFCNGVFFAIDRFGEIYHC 220


>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
          Length = 394

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
 Frame = +2

Query: 2   HPLSRHEIKLPPMLTFSIQYEYHEDCPP---EESSDRFVRKAAISSNILKNNTTVNSYHH 172
           +P+S  +I LPP +TF       ED PP   E   + F+ K  +SS    +N        
Sbjct: 116 NPISGVQIDLPPAITF-------EDSPPDLDETPIEFFLNKVVLSSTPSPSNANC----- 163

Query: 173 NTPPIVMTIYGECGYLGFTKLGDKVWTDVNVPSCNFDDIIYHNGNFYAVDPRGEVYVCGI 352
               ++M I+     L F K GDK W  +      + D++Y+  NFYA+  R +V  C I
Sbjct: 164 ----VIMAIHSNYNKLAFCKPGDKRWITLKSEDIQYKDLLYYKDNFYAIG-RSKVVQCDI 218

Query: 353 DDD 361
            DD
Sbjct: 219 GDD 221


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 17/137 (12%)
 Frame = +2

Query: 2   HPLSRHEIKLPPMLTFS--IQYEYHE---------------DCPPEESSDRFVRKAAISS 130
           +PL+R ++ LPP+ +F   I + Y +                    +  D F+RK  +SS
Sbjct: 113 NPLTRAKLSLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSS 172

Query: 131 NILKNNTTVNSYHHNTPPIVMTIYGECGYLGFTKLGDKVWTDVNVPSCNFDDIIYHNGNF 310
           + LK+N  V          V+ I  +   L + + GDK W+ V       +D+I+ NG F
Sbjct: 173 SPLKDNNFV----------VIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMF 222

Query: 311 YAVDPRGEVYVCGIDDD 361
           YAV+  G++ +C I  D
Sbjct: 223 YAVNKAGQIVICDISSD 239


>dbj|BAB08584.1| unnamed protein product [Arabidopsis thaliana]
          Length = 340

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/89 (33%), Positives = 48/89 (53%)
 Frame = +2

Query: 80  PPEESSDRFVRKAAISSNILKNNTTVNSYHHNTPPIVMTIYGECGYLGFTKLGDKVWTDV 259
           P  E+   F++KA  S+++L +             +V+ IY     L F + GDK WTD+
Sbjct: 111 PDSEALKNFIKKAVSSTSLLDDEW-----------VVLVIYNTDRKLAFCRRGDKQWTDL 159

Query: 260 NVPSCNFDDIIYHNGNFYAVDPRGEVYVC 346
              + + DDI++ NG F+A+D  GE+Y C
Sbjct: 160 ESVASSVDDIVFCNGVFFAIDRLGEIYHC 188