BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005552
         (841 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    60   3e-17
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    58   4e-14
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    59   1e-06

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 60.1 bits (144), Expect(2) = 3e-17
 Identities = 42/108 (38%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
 Frame = +2

Query: 5   WTDVNVPSCYFEDIIYHNGNFYAVNHHGDVYVCGIDDDKERGPRGRKIASIETNDWDQKY 184
           WT +     Y ED+I+H G FYAVN +G + VC +       PR   I   +    D +Y
Sbjct: 199 WTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGS---SPRVSIIEMPQQFGGDLQY 255

Query: 185 LVESSTGSGLLLLVRCRKIKYFDRSLKWDK----YRTTDFSVWRLNLK 316
           LVES  G  LLL+ R   + Y    ++ D+    YRTT F V RL+LK
Sbjct: 256 LVES--GEELLLVTRYLDLTY---DVEPDQTSLIYRTTRFQVCRLDLK 298



 Score = 54.7 bits (130), Expect(2) = 3e-17
 Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
 Frame = +3

Query: 429 DISCTSTTKVNDLGNETIFVGRNTSLSMSSSQ--TIKPNCIYFTDD-NWVIYLHKGGGHD 599
           D+       V+ LG+  +F+G N SLS+SS      K NCIY+TDD +   Y   GG  D
Sbjct: 296 DLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQD 355

Query: 600 MGIFSMEHRTIEP----HFQGKSIHPISPPIW 683
           +GIF++E  +IEP    HF+ +      PP+W
Sbjct: 356 LGIFNLEDGSIEPLPCSHFRIR----WPPPLW 383


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 57.8 bits (138), Expect(2) = 4e-14
 Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
 Frame = +2

Query: 5   WTDVNVPSCYFEDIIYHNGNFYAVNHHGDVYVCGIDDDKERGPRGRKIASIETN---DWD 175
           W  V     + ED+IY NG FYAVN  G + VC ++ +        K++ IET      D
Sbjct: 203 WNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNGNSP------KVSFIETPRQIGGD 256

Query: 176 QKYLVESSTGSGLLLLVRCRKIKYFDRSLKWD--KYRTTDFSVWRLNL 313
            +YLV  S+G GLLL+ R     Y D  +++D   Y+T  F V++L+L
Sbjct: 257 MQYLV--SSGDGLLLVTR-----YLDLDVEFDIFIYKTARFEVFKLDL 297



 Score = 46.6 bits (109), Expect(2) = 4e-14
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
 Frame = +3

Query: 429 DISCTSTTKVNDLGNETIFVGRNTSLSMSSS--QTIKPNCIYFTDDNWVI-YLHKGGGHD 599
           D++     +V  LG+  +F+G N+SL++S+S       +CIY+TDD     Y    G HD
Sbjct: 296 DLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGEHD 355

Query: 600 MGIFSMEHRTIEP 638
           +GIF +   +IEP
Sbjct: 356 LGIFKLSDGSIEP 368


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 41/108 (37%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
 Frame = +2

Query: 5   WTDVNVPSCYFEDIIYHNGNFYAVNHHGDVYVCGIDDDKERGPRGRKIASIETNDWDQKY 184
           WT +     Y ED+I+H G FYAVN +G + VC +       PR   I   +    D +Y
Sbjct: 199 WTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGS---SPRVSIIEMPQQFGGDLQY 255

Query: 185 LVESSTGSGLLLLVRCRKIKYFDRSLKWDK----YRTTDFSVWRLNLK 316
           LVES  G  LLL+ R   + Y    ++ D+    YRTT F V RL+ K
Sbjct: 256 LVES--GEELLLVTRYLDLTY---DVEXDQTSLIYRTTRFQVCRLDSK 298