BLASTX nr result

ID: Bupleurum21_contig00005551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005551
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271447.2| PREDICTED: protein argonaute 16-like [Vitis ...   120   3e-25
emb|CBI28870.3| unnamed protein product [Vitis vinifera]              120   3e-25
ref|XP_002534129.1| eukaryotic translation initiation factor 2c,...   105   1e-20
ref|XP_004156089.1| PREDICTED: protein argonaute 16-like [Cucumi...   102   6e-20
ref|XP_004140126.1| PREDICTED: protein argonaute 16-like [Cucumi...   102   6e-20

>ref|XP_002271447.2| PREDICTED: protein argonaute 16-like [Vitis vinifera]
          Length = 960

 Score =  120 bits (301), Expect = 3e-25
 Identities = 60/102 (58%), Positives = 79/102 (77%), Gaps = 1/102 (0%)
 Frame = +3

Query: 435 MEKTGIQDLGSSASLPLPPA-DIPTGVKPKRVNPAKRGMISRHGFGSSGRRIQLEANHFK 611
           MEKTGI++  +S + PLPP+  IP  VKP++V P KR +ISR G G++GRRI L  NHFK
Sbjct: 57  MEKTGIEE--ASGTPPLPPSPSIPPNVKPEQVGPPKRSVISRRGVGTAGRRISLLTNHFK 114

Query: 612 VSVNKPDEIFYQYNVSISYEDKKPVENKGIGRKIVDKLYQTY 737
           VS+N  D +FYQY+VSI+ EDK+ V+ KGIGRK++D+LY TY
Sbjct: 115 VSMNISDAMFYQYSVSITSEDKRVVDGKGIGRKVIDRLYLTY 156


>emb|CBI28870.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  120 bits (301), Expect = 3e-25
 Identities = 60/102 (58%), Positives = 79/102 (77%), Gaps = 1/102 (0%)
 Frame = +3

Query: 435 MEKTGIQDLGSSASLPLPPA-DIPTGVKPKRVNPAKRGMISRHGFGSSGRRIQLEANHFK 611
           MEKTGI++  +S + PLPP+  IP  VKP++V P KR +ISR G G++GRRI L  NHFK
Sbjct: 16  MEKTGIEE--ASGTPPLPPSPSIPPNVKPEQVGPPKRSVISRRGVGTAGRRISLLTNHFK 73

Query: 612 VSVNKPDEIFYQYNVSISYEDKKPVENKGIGRKIVDKLYQTY 737
           VS+N  D +FYQY+VSI+ EDK+ V+ KGIGRK++D+LY TY
Sbjct: 74  VSMNISDAMFYQYSVSITSEDKRVVDGKGIGRKVIDRLYLTY 115


>ref|XP_002534129.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223525814|gb|EEF28257.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 863

 Score =  105 bits (262), Expect = 1e-20
 Identities = 47/84 (55%), Positives = 63/84 (75%)
 Frame = +3

Query: 486 PPADIPTGVKPKRVNPAKRGMISRHGFGSSGRRIQLEANHFKVSVNKPDEIFYQYNVSIS 665
           PP  +PT  K K+ +  K  ++SR GFG+SG RI L +NHFKVS+N PD +FYQY+VS +
Sbjct: 9   PPPPVPTNGKTKKADAPKHSIVSRQGFGNSGHRIPLLSNHFKVSINIPDAVFYQYSVSFT 68

Query: 666 YEDKKPVENKGIGRKIVDKLYQTY 737
            ED + VE KGIGRK++++LYQTY
Sbjct: 69  SEDDRVVEVKGIGRKLIERLYQTY 92


>ref|XP_004156089.1| PREDICTED: protein argonaute 16-like [Cucumis sativus]
          Length = 903

 Score =  102 bits (255), Expect = 6e-20
 Identities = 51/93 (54%), Positives = 68/93 (73%)
 Frame = +3

Query: 459 LGSSASLPLPPADIPTGVKPKRVNPAKRGMISRHGFGSSGRRIQLEANHFKVSVNKPDEI 638
           +  ++ LPL P+ +P  +KP++  P +  ++SR G GS GRRI L  NHF+VS+N PD +
Sbjct: 11  MSETSPLPLEPS-LPPDMKPEKAMP-QYTIMSRRGVGSKGRRIPLLTNHFRVSLNAPDLV 68

Query: 639 FYQYNVSISYEDKKPVENKGIGRKIVDKLYQTY 737
           FYQY VSI YED +PVE K IGRK++DKLYQTY
Sbjct: 69  FYQYAVSICYEDGRPVEGKDIGRKLMDKLYQTY 101


>ref|XP_004140126.1| PREDICTED: protein argonaute 16-like [Cucumis sativus]
          Length = 904

 Score =  102 bits (255), Expect = 6e-20
 Identities = 51/93 (54%), Positives = 68/93 (73%)
 Frame = +3

Query: 459 LGSSASLPLPPADIPTGVKPKRVNPAKRGMISRHGFGSSGRRIQLEANHFKVSVNKPDEI 638
           +  ++ LPL P+ +P  +KP++  P +  ++SR G GS GRRI L  NHF+VS+N PD +
Sbjct: 11  MSETSPLPLEPS-LPPDMKPEKAMP-QYTIMSRRGVGSKGRRIPLLTNHFRVSLNAPDLV 68

Query: 639 FYQYNVSISYEDKKPVENKGIGRKIVDKLYQTY 737
           FYQY VSI YED +PVE K IGRK++DKLYQTY
Sbjct: 69  FYQYAVSICYEDGRPVEGKDIGRKLMDKLYQTY 101


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