BLASTX nr result

ID: Bupleurum21_contig00005547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005547
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16742.3| unnamed protein product [Vitis vinifera]              202   3e-50
emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]   202   3e-50
ref|XP_002520828.1| pentatricopeptide repeat-containing protein,...   199   1e-49
ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containi...   186   2e-45
tpg|DAA52535.1| TPA: hypothetical protein ZEAMMB73_896450 [Zea m...   167   8e-40

>emb|CBI16742.3| unnamed protein product [Vitis vinifera]
          Length = 674

 Score =  202 bits (513), Expect = 3e-50
 Identities = 98/153 (64%), Positives = 124/153 (81%)
 Frame = +3

Query: 3   LELLQAHALVIQLGFVRSTSLMNALVSMYSRIGDLNSSWLAFNDLEIKDVVSWTAIILSY 182
           LEL+QAHAL I +G    TSL NAL++MYSRIGD++SS +AF  L+ KDVVSWTA++L++
Sbjct: 397 LELMQAHALAIVVGCECETSLSNALITMYSRIGDISSSRIAFESLKAKDVVSWTAMLLAF 456

Query: 183 SIHGYGAQSLQAFARMLRSGTMPDDITFIGVLSACSHAGLVRKGQKLFNAMAHAYGLVPK 362
           + HG+G  +L  F  ML+SGT PD+ITF+GVLSACSHAGLV+KGQKLF++M+ AYGL P+
Sbjct: 457 TYHGHGDHALHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKKGQKLFDSMSRAYGLEPR 516

Query: 363 AAHYSCLVDILGRAGEIEQATRVVDTMPLHERD 461
           A HYSCLVDILGRAG++ +A  VV  MP  ERD
Sbjct: 517 AEHYSCLVDILGRAGQVHEAMDVVWKMPECERD 549


>emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]
          Length = 932

 Score =  202 bits (513), Expect = 3e-50
 Identities = 98/153 (64%), Positives = 124/153 (81%)
 Frame = +3

Query: 3   LELLQAHALVIQLGFVRSTSLMNALVSMYSRIGDLNSSWLAFNDLEIKDVVSWTAIILSY 182
           LEL+QAHAL I +G    TSL NAL++MYSRIGD++SS +AF  L+ KDVVSWTA++L++
Sbjct: 303 LELMQAHALAIVVGCECETSLSNALITMYSRIGDISSSRIAFESLKAKDVVSWTAMLLAF 362

Query: 183 SIHGYGAQSLQAFARMLRSGTMPDDITFIGVLSACSHAGLVRKGQKLFNAMAHAYGLVPK 362
           + HG+G  +L  F  ML+SGT PD+ITF+GVLSACSHAGLV+KGQKLF++M+ AYGL P+
Sbjct: 363 TYHGHGDHALHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKKGQKLFDSMSRAYGLEPR 422

Query: 363 AAHYSCLVDILGRAGEIEQATRVVDTMPLHERD 461
           A HYSCLVDILGRAG++ +A  VV  MP  ERD
Sbjct: 423 AEHYSCLVDILGRAGQVHEAMDVVWKMPECERD 455


>ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539959|gb|EEF41537.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 656

 Score =  199 bits (507), Expect = 1e-49
 Identities = 99/153 (64%), Positives = 120/153 (78%)
 Frame = +3

Query: 3   LELLQAHALVIQLGFVRSTSLMNALVSMYSRIGDLNSSWLAFNDLEIKDVVSWTAIILSY 182
           LEL+QAH LVI LGF +   L N LV+ YSR GD+ S+   F+ LEIKD+VSWTA+IL+Y
Sbjct: 379 LELMQAHGLVIHLGFEQDKVLANGLVTTYSRCGDVLSARFIFDQLEIKDIVSWTAMILAY 438

Query: 183 SIHGYGAQSLQAFARMLRSGTMPDDITFIGVLSACSHAGLVRKGQKLFNAMAHAYGLVPK 362
           S HG G  +LQ FARMLRSG  PD ITF+G+LSACSHAGLV+KGQ LF++M+ AYG+ P+
Sbjct: 439 SNHGCGPHALQVFARMLRSGAKPDGITFVGLLSACSHAGLVKKGQMLFDSMSCAYGVEPR 498

Query: 363 AAHYSCLVDILGRAGEIEQATRVVDTMPLHERD 461
           A HYSCLVDILGRAGE+ +A +VV  MP HE D
Sbjct: 499 AEHYSCLVDILGRAGEMNKAMKVVSEMPPHECD 531


>ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09410-like [Glycine max]
          Length = 669

 Score =  186 bits (472), Expect = 2e-45
 Identities = 90/153 (58%), Positives = 119/153 (77%)
 Frame = +3

Query: 3   LELLQAHALVIQLGFVRSTSLMNALVSMYSRIGDLNSSWLAFNDLEIKDVVSWTAIILSY 182
           +EL+QAHA+VI LGF  +T L NAL+++YS+ GDL S+ L F  L+ KDVVSWTA+I++Y
Sbjct: 393 VELMQAHAMVIHLGFEHNTWLTNALITLYSKSGDLCSARLVFEQLKSKDVVSWTAMIVAY 452

Query: 183 SIHGYGAQSLQAFARMLRSGTMPDDITFIGVLSACSHAGLVRKGQKLFNAMAHAYGLVPK 362
           S HG+G  +LQ FARML SG  PD++TF+G+LSACSH GLV +G++LF+++   Y L PK
Sbjct: 453 SNHGHGHHALQVFARMLVSGIKPDEVTFVGLLSACSHVGLVHQGRRLFDSIKGTYNLTPK 512

Query: 363 AAHYSCLVDILGRAGEIEQATRVVDTMPLHERD 461
           A HYSCLVDILGRAG +++A  VV T+P   RD
Sbjct: 513 AEHYSCLVDILGRAGLVDEAMDVVATIPPSARD 545


>tpg|DAA52535.1| TPA: hypothetical protein ZEAMMB73_896450 [Zea mays]
           gi|414873979|tpg|DAA52536.1| TPA: hypothetical protein
           ZEAMMB73_896450 [Zea mays]
          Length = 701

 Score =  167 bits (423), Expect = 8e-40
 Identities = 82/153 (53%), Positives = 105/153 (68%)
 Frame = +3

Query: 3   LELLQAHALVIQLGFVRSTSLMNALVSMYSRIGDLNSSWLAFNDLEIKDVVSWTAIILSY 182
           +E+ Q H LVI LGF+  TSL NAL++MYSR GDL S+W AF  LE KD ++WT+I+ ++
Sbjct: 417 VEVKQIHGLVIALGFLSETSLGNALLTMYSRSGDLMSAWFAFKRLEQKDAITWTSIVQAF 476

Query: 183 SIHGYGAQSLQAFARMLRSGTMPDDITFIGVLSACSHAGLVRKGQKLFNAMAHAYGLVPK 362
           + HG G  +L  FA+MLR G  P   TF  VLSAC H GLV KG+K+F ++ H YGL P 
Sbjct: 477 ADHGCGYHALLGFAQMLRHGYKPSSTTFTAVLSACRHVGLVGKGRKMFKSIYHVYGLEPT 536

Query: 363 AAHYSCLVDILGRAGEIEQATRVVDTMPLHERD 461
             HYSCLVD+LGRAG + +A  +VD M    RD
Sbjct: 537 IEHYSCLVDLLGRAGYVREAKELVDGMQQGMRD 569


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