BLASTX nr result
ID: Bupleurum21_contig00005537
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00005537
(1393 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28700.3| unnamed protein product [Vitis vinifera] 409 e-149
emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera] 393 e-143
ref|XP_002520729.1| conserved hypothetical protein [Ricinus comm... 385 e-143
ref|XP_002307587.1| predicted protein [Populus trichocarpa] gi|2... 353 8e-95
ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinif... 348 2e-93
>emb|CBI28700.3| unnamed protein product [Vitis vinifera]
Length = 532
Score = 409 bits (1050), Expect(2) = e-149
Identities = 208/300 (69%), Positives = 237/300 (79%)
Frame = -1
Query: 1393 SARKRASRLNAVVWPLSDDLTIKVFTMLDTQSVCYAAAVCSFFRKCASDPLCYANIDLMT 1214
SARKRAS N++ W L DLTIKVF+MLDTQS+CY AA CS F KCA DPLCYANIDL T
Sbjct: 96 SARKRASIHNSLTWALPPDLTIKVFSMLDTQSLCYTAATCSMFHKCAMDPLCYANIDLTT 155
Query: 1213 VFPKVNNVVVSSMIERAGKSLRSIKLGLLSGPTSSIGSSQPCMYSTRNSTDVSGFSWNDK 1034
V PKVNN VVS+MI+RAGK L+S++LG++ GPT S GSSQP +Y+ RNS D +GFSWNDK
Sbjct: 156 VVPKVNNAVVSTMIQRAGKVLQSLRLGIVPGPTLSPGSSQPLVYTIRNSVDAAGFSWNDK 215
Query: 1033 RSRQGKESCIXXXXXXXXXXXXXXXXXXXLRRLHLNNIERVDNTALSAALSVCPYLLDLE 854
RSRQGKES I L+RLHL NIER+DNTAL AALS CP LLDLE
Sbjct: 216 RSRQGKESSILSRSCLTALSGDSGAAGALLKRLHLYNIERMDNTALCAALSACPSLLDLE 275
Query: 853 IIGLHVELRQTLESVSKHCHMIERLFFESSKTGRDDSLKLSPTCTDLVRNCPNLNSLALR 674
I+GLHVELRQTL SVS +CH+IERLFFESSKTGRDDSLK SPTC DLV NCP+L SLALR
Sbjct: 276 IVGLHVELRQTLMSVSTNCHLIERLFFESSKTGRDDSLK-SPTCVDLVNNCPHLTSLALR 334
Query: 673 GFKLQDFKVLALVKGFRKLRHLDISTSYSISGAFLRKLIGGAGGNLLEVLIMRDCMHLRK 494
GFKL D+KV LVKGF KL+++D STSYSI+G FLR L GGNLLEVL++RDCMHL++
Sbjct: 335 GFKLHDYKVRILVKGFHKLKYVDFSTSYSITGTFLRNLGSSTGGNLLEVLLLRDCMHLKE 394
Score = 148 bits (373), Expect(2) = e-149
Identities = 75/139 (53%), Positives = 99/139 (71%), Gaps = 2/139 (1%)
Frame = -2
Query: 435 QAEVERFISAVIAGEFEFLRHLDVSNREGLASEEDWCSRWYDPSFVPTEQLYGKRPGFCL 256
+ EV +F+SA+IAG+F LR LD+SNREGLASE DW R Y+ S +P +Q+ +RP CL
Sbjct: 394 EVEVAKFLSAIIAGDFRLLRLLDISNREGLASEGDWYYRCYNSSMIPIKQVSEERPDICL 453
Query: 255 LAEFPAEGSYVEFGQMIG--SDDVSLPTTISNNWYERSCFMNISDSSYNSDLGSGNEDSH 82
LAEFP+EGS +E QMI + D SL + +S++ + S M+ S+SSYNSD GSGNED
Sbjct: 454 LAEFPSEGSIIEIEQMIDILNSDASLSSQLSSHSSDSSVSMSSSESSYNSDQGSGNEDGR 513
Query: 81 DTSFIIYGESSDEADFLYV 25
+T ++IY ESSDE D L V
Sbjct: 514 ETGYVIYEESSDEVDILAV 532
>emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]
Length = 603
Score = 393 bits (1010), Expect(2) = e-143
Identities = 208/329 (63%), Positives = 237/329 (72%), Gaps = 29/329 (8%)
Frame = -1
Query: 1393 SARKRASRLNAVVWPLSDDLTIKVFTMLDTQSVCYAAAVCSFFRKCASDPLCYANIDLMT 1214
SARKRAS N++ W L DLTIKVF+MLDTQS+CY AA CS F KCA DPLCYANIDL T
Sbjct: 96 SARKRASIHNSLTWALPPDLTIKVFSMLDTQSLCYTAATCSMFHKCAMDPLCYANIDLTT 155
Query: 1213 VFPKVNNVVVSSMIERAGKSLRSIKLGLLSGPTSSIGSSQPCMYSTRNSTDVSGFSWNDK 1034
V PKVNN VVS+MI+RAGK L+S++LG++ GPT S GSSQP +Y+ RNS D +GFSWNDK
Sbjct: 156 VVPKVNNAVVSTMIQRAGKVLQSLRLGIVPGPTLSPGSSQPLVYTIRNSVDAAGFSWNDK 215
Query: 1033 RSRQGKESCIXXXXXXXXXXXXXXXXXXXLRRLHLNNIERVDNTALSAALSVCPYLLDLE 854
RSRQGKES I L+RLHL NIER+DNTAL AALS CP LLDLE
Sbjct: 216 RSRQGKESSILSRSCLTALSGDSGAAGALLKRLHLYNIERMDNTALCAALSACPSLLDLE 275
Query: 853 IIGLHVELRQTLESVSKHCHMIERLFFESSKTGRDDSLKLSPTCTDLVRNCPNLNSLALR 674
I+GLHVELRQTL SVS +CH+IERLFFESSKTGRDDSLK SPTC DLV NCP+L SLALR
Sbjct: 276 IVGLHVELRQTLMSVSTNCHLIERLFFESSKTGRDDSLK-SPTCVDLVNNCPHLTSLALR 334
Query: 673 GFKLQDFKVLALVK-----------------------------GFRKLRHLDISTSYSIS 581
GFKL D+KV LVK GF KL+++D STSYSI+
Sbjct: 335 GFKLHDYKVRILVKVVVHNFLIGRIVGLRHRGEFLIVSALVCMGFHKLKYVDFSTSYSIT 394
Query: 580 GAFLRKLIGGAGGNLLEVLIMRDCMHLRK 494
G FLR L GGNLLEVL++RDCMHL++
Sbjct: 395 GTFLRNLGSSTGGNLLEVLLLRDCMHLKE 423
Score = 143 bits (361), Expect(2) = e-143
Identities = 72/133 (54%), Positives = 96/133 (72%), Gaps = 2/133 (1%)
Frame = -2
Query: 435 QAEVERFISAVIAGEFEFLRHLDVSNREGLASEEDWCSRWYDPSFVPTEQLYGKRPGFCL 256
+ EV +F+SA+IAG+F LR LD+SNREGLASE DW R Y+ S +P +Q+ +RP CL
Sbjct: 423 EVEVAKFLSAIIAGDFRLLRLLDISNREGLASEGDWYYRCYNSSMIPIKQVSEERPDICL 482
Query: 255 LAEFPAEGSYVEFGQMIG--SDDVSLPTTISNNWYERSCFMNISDSSYNSDLGSGNEDSH 82
LAEFP+EGS +E QMI + D SL + +S++ + S M+ S+SSYNSD GSGNED
Sbjct: 483 LAEFPSEGSIIEIEQMIDILNSDASLSSQLSSHSSDSSVSMSSSESSYNSDQGSGNEDGR 542
Query: 81 DTSFIIYGESSDE 43
+T ++IY ESSDE
Sbjct: 543 ETGYVIYEESSDE 555
>ref|XP_002520729.1| conserved hypothetical protein [Ricinus communis]
gi|223540114|gb|EEF41691.1| conserved hypothetical
protein [Ricinus communis]
Length = 515
Score = 385 bits (989), Expect(2) = e-143
Identities = 200/293 (68%), Positives = 229/293 (78%)
Frame = -1
Query: 1393 SARKRASRLNAVVWPLSDDLTIKVFTMLDTQSVCYAAAVCSFFRKCASDPLCYANIDLMT 1214
S+RKR+S+ N++ W L DLTIKVF+MLDTQS+CYAAA CS F KCA DPLCYANIDL T
Sbjct: 90 SSRKRSSKHNSLTWVLPPDLTIKVFSMLDTQSLCYAAATCSMFHKCAMDPLCYANIDLTT 149
Query: 1213 VFPKVNNVVVSSMIERAGKSLRSIKLGLLSGPTSSIGSSQPCMYSTRNSTDVSGFSWNDK 1034
V PKVNN VVS+MI+RAGKSL+S+KLG++ GPTSS GS + +YS RNS DVS SWNDK
Sbjct: 150 VVPKVNNAVVSTMIQRAGKSLQSLKLGIVPGPTSSPGSCETLVYSIRNSVDVSNISWNDK 209
Query: 1033 RSRQGKESCIXXXXXXXXXXXXXXXXXXXLRRLHLNNIERVDNTALSAALSVCPYLLDLE 854
R+RQGKES I L+RLHL NIER+DNT+L ALS CP LLDLE
Sbjct: 210 RTRQGKESSILTRSCLYSLTGDSGAAGTLLKRLHLYNIERMDNTSLYGALSACPSLLDLE 269
Query: 853 IIGLHVELRQTLESVSKHCHMIERLFFESSKTGRDDSLKLSPTCTDLVRNCPNLNSLALR 674
I+GLHVELRQTL SVS +C +IERLFFESSKTGRD+SLK SPTC DLV NCPNL SLALR
Sbjct: 270 IVGLHVELRQTLVSVSMNCPLIERLFFESSKTGRDESLK-SPTCVDLVTNCPNLTSLALR 328
Query: 673 GFKLQDFKVLALVKGFRKLRHLDISTSYSISGAFLRKLIGGAGGNLLEVLIMR 515
GFKL D KV LVKGFRKL+++D STSYSI+G FLR L G +GGNLLEV + R
Sbjct: 329 GFKLHDCKVRILVKGFRKLKYVDFSTSYSITGHFLRNLGGSSGGNLLEVEVAR 381
Score = 151 bits (382), Expect(2) = e-143
Identities = 74/141 (52%), Positives = 103/141 (73%), Gaps = 3/141 (2%)
Frame = -2
Query: 438 MQAEVERFISAVIAGEFEFLRHLDVSNREGLASEEDWCSRWYDPSFVPTEQLYGKRPGFC 259
++ EV R ++AV+ G+F+ LRHLDVSNREGLASE DW R Y +P +Q+ RP C
Sbjct: 375 LEVEVARLLTAVLTGDFKSLRHLDVSNREGLASESDWYHRCYSLRTIPVKQVLEARPDMC 434
Query: 258 LLAEFPAEGSYVEFGQMIGSD---DVSLPTTISNNWYERSCFMNISDSSYNSDLGSGNED 88
LLA+FP +GS+++ QMI S+ +VSLP+ +S++ + S FM+ S+SSYNSD SGNE+
Sbjct: 435 LLADFPPDGSFIDVEQMIDSELNSEVSLPSQLSSHTSDSSLFMSTSESSYNSDQSSGNEE 494
Query: 87 SHDTSFIIYGESSDEADFLYV 25
S D+++I+Y ESSDE DFL V
Sbjct: 495 SRDSAYIVYEESSDEVDFLGV 515
>ref|XP_002307587.1| predicted protein [Populus trichocarpa] gi|222857036|gb|EEE94583.1|
predicted protein [Populus trichocarpa]
Length = 676
Score = 353 bits (905), Expect = 8e-95
Identities = 182/275 (66%), Positives = 211/275 (76%)
Frame = -1
Query: 1393 SARKRASRLNAVVWPLSDDLTIKVFTMLDTQSVCYAAAVCSFFRKCASDPLCYANIDLMT 1214
SARKR+S N++ W L DLTIK+F+MLD QS+CYAAA CS F KCA DPLCYANIDL T
Sbjct: 95 SARKRSSFHNSLTWALPPDLTIKLFSMLDAQSLCYAAATCSMFYKCAMDPLCYANIDLTT 154
Query: 1213 VFPKVNNVVVSSMIERAGKSLRSIKLGLLSGPTSSIGSSQPCMYSTRNSTDVSGFSWNDK 1034
V PKVNN VVS+MI+RAGK+LRS+KLG++ GPT GS QP +Y RN+ +VS FSWNDK
Sbjct: 155 VVPKVNNAVVSTMIQRAGKALRSLKLGIVPGPTLPHGSCQPLVYGIRNAVEVSNFSWNDK 214
Query: 1033 RSRQGKESCIXXXXXXXXXXXXXXXXXXXLRRLHLNNIERVDNTALSAALSVCPYLLDLE 854
++RQGKES LR LHL NIER+DNT+L ALS CP LLDLE
Sbjct: 215 KTRQGKESSTLTRYCLTPLSGENGAAGAVLRGLHLYNIERIDNTSLCGALSACPSLLDLE 274
Query: 853 IIGLHVELRQTLESVSKHCHMIERLFFESSKTGRDDSLKLSPTCTDLVRNCPNLNSLALR 674
IIGLHV+LRQTL SVS +C +IERLFFESSKTGRDDSLK S TC DLV NCPNL SLALR
Sbjct: 275 IIGLHVDLRQTLVSVSMNCPLIERLFFESSKTGRDDSLK-SSTCVDLVNNCPNLTSLALR 333
Query: 673 GFKLQDFKVLALVKGFRKLRHLDISTSYSISGAFL 569
GFKL D+K+ LVKGF KL+++D STSYSI+G+FL
Sbjct: 334 GFKLYDYKLRILVKGFCKLKYVDFSTSYSITGSFL 368
Score = 72.0 bits (175), Expect = 3e-10
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = -2
Query: 417 FISAVIAGEFEFLRHL-DVSNREGLASEEDWCSRWYDPSFVPTEQLYGKRPGFCLLAEFP 241
++ + G +F L D+SNREGLA+ D R Y S +PT+Q+ +RP CLLAEFP
Sbjct: 375 YLHQFLLGTLDFFDILWDISNREGLAAAGDSYGRCYSLSIIPTKQVLEERPDICLLAEFP 434
Query: 240 AEGSYVEFGQMIGSD 196
+EGS+V+ GQM SD
Sbjct: 435 SEGSFVDLGQMTDSD 449
>ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinifera]
Length = 486
Score = 348 bits (893), Expect = 2e-93
Identities = 186/278 (66%), Positives = 207/278 (74%), Gaps = 13/278 (4%)
Frame = -1
Query: 1393 SARKRASRLNAVVWPLSDDLTIKVFTMLDTQSVCYAAAVCSFFRKCASDPLCYANIDLMT 1214
SARKRAS N++ W L DLTIKVF+MLDTQS+CY AA CS F KCA DPLCYANIDL T
Sbjct: 96 SARKRASIHNSLTWALPPDLTIKVFSMLDTQSLCYTAATCSMFHKCAMDPLCYANIDLTT 155
Query: 1213 VFPKVNNVVVSSMIERAGKSLRSIKLGLLSGPTSSIGSSQPCMYSTRNSTDVSGFSWNDK 1034
V PKVNN VVS+MI+RAGK L+S++LG++ GPT S GSSQP +Y+ RNS D +GFSWNDK
Sbjct: 156 VVPKVNNAVVSTMIQRAGKVLQSLRLGIVPGPTLSPGSSQPLVYTIRNSVDAAGFSWNDK 215
Query: 1033 RSRQGKESCIXXXXXXXXXXXXXXXXXXXLRRLHLNNIERVDNTALSAALSVCPYLLDLE 854
RSRQGKES I L+RLHL NIER+DNTAL AALS CP LLDLE
Sbjct: 216 RSRQGKESSILSRSCLTALSGDSGAAGALLKRLHLYNIERMDNTALCAALSACPSLLDLE 275
Query: 853 IIGLHVELRQTLESVSKHCHMIERLFFESSKTGRDDSLKLSPTCTDLVRNCPNLNSLALR 674
I+GLHVELRQTL SVS +CH+IERLFFESSKTGRDDSLK SPTC DLV NCP+L SLALR
Sbjct: 276 IVGLHVELRQTLMSVSTNCHLIERLFFESSKTGRDDSLK-SPTCVDLVNNCPHLTSLALR 334
Query: 673 GFKLQDFKVLALVK-------------GFRKLRHLDIS 599
GFKL D+KV LVK FR LR LDIS
Sbjct: 335 GFKLHDYKVRILVKVEVAKFLSAIIAGDFRLLRLLDIS 372
Score = 148 bits (373), Expect = 4e-33
Identities = 75/140 (53%), Positives = 100/140 (71%), Gaps = 2/140 (1%)
Frame = -2
Query: 438 MQAEVERFISAVIAGEFEFLRHLDVSNREGLASEEDWCSRWYDPSFVPTEQLYGKRPGFC 259
++ EV +F+SA+IAG+F LR LD+SNREGLASE DW R Y+ S +P +Q+ +RP C
Sbjct: 347 VKVEVAKFLSAIIAGDFRLLRLLDISNREGLASEGDWYYRCYNSSMIPIKQVSEERPDIC 406
Query: 258 LLAEFPAEGSYVEFGQMIG--SDDVSLPTTISNNWYERSCFMNISDSSYNSDLGSGNEDS 85
LLAEFP+EGS +E QMI + D SL + +S++ + S M+ S+SSYNSD GSGNED
Sbjct: 407 LLAEFPSEGSIIEIEQMIDILNSDASLSSQLSSHSSDSSVSMSSSESSYNSDQGSGNEDG 466
Query: 84 HDTSFIIYGESSDEADFLYV 25
+T ++IY ESSDE D L V
Sbjct: 467 RETGYVIYEESSDEVDILAV 486