BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005531
         (1033 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chlorop...   334   2e-89
ref|XP_002279657.2| PREDICTED: 50S ribosomal protein L6, chlorop...   331   2e-88
ref|XP_004144493.1| PREDICTED: 50S ribosomal protein L6, chlorop...   330   5e-88
gb|AFK43716.1| unknown [Medicago truncatula]                          328   1e-87
ref|XP_002320459.1| predicted protein [Populus trichocarpa] gi|2...   328   1e-87

>ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like isoform 1
           [Glycine max]
          Length = 226

 Score =  334 bits (856), Expect = 2e-89
 Identities = 164/216 (75%), Positives = 190/216 (87%)
 Frame = -2

Query: 981 SSSVTCSFQTSNLRSTLWGNRHGICISSIPASHVGVVRKTVECKESRIGKQLIEVPETVT 802
           +SSVT SF+ SNL+S   G  + + +SS+P +HVG  RKTVECKESRIGKQ I VP  VT
Sbjct: 2   ASSVTSSFRISNLKSVFVGETNKLRVSSVPGAHVGFNRKTVECKESRIGKQPIPVPSNVT 61

Query: 801 LTLAGQDLKVKGPLGELALTYPREVKLDKQESGLYKVNKAVETRRANQMHGLFRTLTNNM 622
           + L GQD++VKGPLGELALTYPREV ++++ESG  +V KAVETRRANQMHGLFRTLT+N+
Sbjct: 62  VKLEGQDIQVKGPLGELALTYPREVLVEREESGTLRVKKAVETRRANQMHGLFRTLTDNL 121

Query: 621 VVGVSKGFDKKLLLIGVGYRAALEGNILVLSLGFSHPVRMTIPQGLQVKVEENTRITVSG 442
           V+GVSKGFDKKL L+GVGYRA +EGN +VL+LGFSHPV+MTIP GL+VKVEENTRITVSG
Sbjct: 122 VIGVSKGFDKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMTIPDGLKVKVEENTRITVSG 181

Query: 441 YDKSEVGQFAASIRKWRPPEPYKGKGVKYADEIIRR 334
           YDKSEVGQFAASIRKWRPPEPYKGKGVKYADEI+RR
Sbjct: 182 YDKSEVGQFAASIRKWRPPEPYKGKGVKYADEIVRR 217


>ref|XP_002279657.2| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Vitis
           vinifera] gi|297739290|emb|CBI28941.3| unnamed protein
           product [Vitis vinifera]
          Length = 226

 Score =  331 bits (848), Expect = 2e-88
 Identities = 162/216 (75%), Positives = 186/216 (86%)
 Frame = -2

Query: 981 SSSVTCSFQTSNLRSTLWGNRHGICISSIPASHVGVVRKTVECKESRIGKQLIEVPETVT 802
           +SS+T SFQTSNLRS   G R+GI +SS+P + VG +RKT+ECKESRIGK+ IEVP  VT
Sbjct: 2   ASSITPSFQTSNLRSAFLGERNGIYVSSVPVTRVGFLRKTIECKESRIGKKPIEVPSNVT 61

Query: 801 LTLAGQDLKVKGPLGELALTYPREVKLDKQESGLYKVNKAVETRRANQMHGLFRTLTNNM 622
           +TL GQDLKVKGPLGEL+ TYPREVK+ K ESG+  V KA ETRRANQMHGLFRTLT+NM
Sbjct: 62  ITLEGQDLKVKGPLGELSRTYPREVKVQKDESGILTVKKAFETRRANQMHGLFRTLTDNM 121

Query: 621 VVGVSKGFDKKLLLIGVGYRAALEGNILVLSLGFSHPVRMTIPQGLQVKVEENTRITVSG 442
           VVGVSKGF+K+L L+GVGYRA +EG  LVL+LGFSHPVRM IP  L+VKVE+NTRI VSG
Sbjct: 122 VVGVSKGFEKRLQLVGVGYRATVEGKDLVLNLGFSHPVRMPIPGDLKVKVEDNTRIIVSG 181

Query: 441 YDKSEVGQFAASIRKWRPPEPYKGKGVKYADEIIRR 334
           YDK  +GQFAAS+RKWRPPEPYKGKGVKYADEI+RR
Sbjct: 182 YDKCNIGQFAASVRKWRPPEPYKGKGVKYADEIVRR 217


>ref|XP_004144493.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Cucumis
           sativus] gi|449515641|ref|XP_004164857.1| PREDICTED: 50S
           ribosomal protein L6, chloroplastic-like [Cucumis
           sativus]
          Length = 233

 Score =  330 bits (845), Expect = 5e-88
 Identities = 154/206 (74%), Positives = 186/206 (90%)
 Frame = -2

Query: 951 SNLRSTLWGNRHGICISSIPASHVGVVRKTVECKESRIGKQLIEVPETVTLTLAGQDLKV 772
           +N RST  G ++G C+S++PA H+G++RKT+ECKESRIGKQ I+VP +VT+TL GQDLKV
Sbjct: 19  NNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKV 78

Query: 771 KGPLGELALTYPREVKLDKQESGLYKVNKAVETRRANQMHGLFRTLTNNMVVGVSKGFDK 592
           KGPLGEL++ YPREVK+++++SG+ +V KA+ETRRANQMHGLFRTLT+NMVVGVSKGF+K
Sbjct: 79  KGPLGELSILYPREVKIEREDSGIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEK 138

Query: 591 KLLLIGVGYRAALEGNILVLSLGFSHPVRMTIPQGLQVKVEENTRITVSGYDKSEVGQFA 412
           KL LIGVGYRA +EG  LVL+LGFSHPVRM IP G+Q+KVEENTRITVSGYDK  +GQFA
Sbjct: 139 KLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFA 198

Query: 411 ASIRKWRPPEPYKGKGVKYADEIIRR 334
           ASIR+WRPPEPYKGKGVKYADEI+RR
Sbjct: 199 ASIRQWRPPEPYKGKGVKYADEIVRR 224


>gb|AFK43716.1| unknown [Medicago truncatula]
          Length = 226

 Score =  328 bits (842), Expect = 1e-87
 Identities = 161/216 (74%), Positives = 187/216 (86%)
 Frame = -2

Query: 981 SSSVTCSFQTSNLRSTLWGNRHGICISSIPASHVGVVRKTVECKESRIGKQLIEVPETVT 802
           +SSVT SFQ SN +S+  G R  I ISS PA+HVG  RKT ECKESRIGKQ I VP  VT
Sbjct: 2   ASSVTSSFQLSNFKSSFVGERSRIRISSAPATHVGFFRKTTECKESRIGKQPIPVPSNVT 61

Query: 801 LTLAGQDLKVKGPLGELALTYPREVKLDKQESGLYKVNKAVETRRANQMHGLFRTLTNNM 622
           + + GQ    KGPLGEL+LTYPREVK+++QE G+ KV+KAVETRRANQMHGLFRTLT+N+
Sbjct: 62  IKMEGQYFHAKGPLGELSLTYPREVKVERQEEGVLKVSKAVETRRANQMHGLFRTLTDNI 121

Query: 621 VVGVSKGFDKKLLLIGVGYRAALEGNILVLSLGFSHPVRMTIPQGLQVKVEENTRITVSG 442
           VVGVSKGF+KKL LIGVGYRA +EGN +VL+LGFSHPV+MTIP+GL+VKV+ENTRITVSG
Sbjct: 122 VVGVSKGFEKKLQLIGVGYRATVEGNEVVLNLGFSHPVKMTIPEGLKVKVDENTRITVSG 181

Query: 441 YDKSEVGQFAASIRKWRPPEPYKGKGVKYADEIIRR 334
           YDKSE+GQFAASIRKWRPPEPYKGKG+KY DE++RR
Sbjct: 182 YDKSEIGQFAASIRKWRPPEPYKGKGIKYEDEVVRR 217


>ref|XP_002320459.1| predicted protein [Populus trichocarpa] gi|222861232|gb|EEE98774.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  328 bits (841), Expect = 1e-87
 Identities = 159/217 (73%), Positives = 186/217 (85%)
 Frame = -2

Query: 987 MASSSVTCSFQTSNLRSTLWGNRHGICISSIPASHVGVVRKTVECKESRIGKQLIEVPET 808
           MASSS+T SFQTSNLRS   G R+ IC+ S+P + +G +RK +ECKESRIGKQ I+VP  
Sbjct: 1   MASSSITSSFQTSNLRSVFLGERNRICVPSVPVTRIGFLRKAIECKESRIGKQPIQVPSN 60

Query: 807 VTLTLAGQDLKVKGPLGELALTYPREVKLDKQESGLYKVNKAVETRRANQMHGLFRTLTN 628
           VT+ L GQDLKVKGPLGEL+ TYPREVKL++ E G+ +V KA+ETRRANQMHGLFRTLT+
Sbjct: 61  VTIKLEGQDLKVKGPLGELSRTYPREVKLERDEDGIIRVKKALETRRANQMHGLFRTLTD 120

Query: 627 NMVVGVSKGFDKKLLLIGVGYRAALEGNILVLSLGFSHPVRMTIPQGLQVKVEENTRITV 448
           NMVVGVSKGF+K+L L+GVGYRA +EG  LVLSLGFSHPVRM IP  LQVKVEENTRI V
Sbjct: 121 NMVVGVSKGFEKRLQLVGVGYRANVEGKDLVLSLGFSHPVRMAIPATLQVKVEENTRIVV 180

Query: 447 SGYDKSEVGQFAASIRKWRPPEPYKGKGVKYADEIIR 337
           SG+DK  +G+FAASIR+WRPPEPYKGKGV+YA+EIIR
Sbjct: 181 SGFDKCSIGEFAASIRRWRPPEPYKGKGVRYANEIIR 217