BLASTX nr result

ID: Bupleurum21_contig00005530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005530
         (2188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267274.1| PREDICTED: translocase of chloroplast 159, c...   351   5e-94
ref|XP_004152365.1| PREDICTED: translocase of chloroplast 159, c...   329   2e-87
ref|XP_004156890.1| PREDICTED: translocase of chloroplast 159, c...   326   1e-86
ref|XP_003532787.1| PREDICTED: translocase of chloroplast 159, c...   319   2e-84
ref|XP_003524230.1| PREDICTED: translocase of chloroplast 159, c...   315   4e-83

>ref|XP_002267274.1| PREDICTED: translocase of chloroplast 159, chloroplastic-like [Vitis
            vinifera]
          Length = 1465

 Score =  351 bits (900), Expect = 5e-94
 Identities = 192/394 (48%), Positives = 258/394 (65%), Gaps = 12/394 (3%)
 Frame = -2

Query: 1149 MELVFASDSLSGGESSRDHSKMMDEHFITYLDEDADPLGENEGELLFDYASFKALSDAAR 970
            +E V    S SG ESSRDHS+ +D   ++  DE+ D   E +G+ LFD A+  AL  AA 
Sbjct: 623  LEQVSGGGSHSGAESSRDHSQRIDGQIVSDSDEEVDTDEEGDGKELFDSAALAALLKAAT 682

Query: 969  GSETDD-SLAVTFADDSRNSSHEHSADLSSTISSTELTAQTDHPILSTSKRF-----DXX 808
             + +D  S+ +T  D SR  S +  A L S   S +   + +   L T            
Sbjct: 683  SASSDSGSITITSPDGSRLFSVDRPAGLGSANRSLKPAPRPNRSNLFTPSNLAIGGDSEN 742

Query: 807  XXXXXXXXXKLDVQHIKVKFLRLVQMLGLSAKEGIASQVLNQLDLAVEKTSNDQ------ 646
                     +  +Q I+VKFLRLVQ LG S ++ I  QVL +L L V + + ++      
Sbjct: 743  TLSEEDKRKQEKIQLIRVKFLRLVQRLGHSPEDSIVGQVLYRLALLVGRQTGEEFSLDTA 802

Query: 645  KAAIVDFEADFKKDMDFSLNILVIGKSGVGKSATINSIFGEEKTTVDPFKPATTAVKEIV 466
            K   +  EA+ K D++FSLNILV+GKSGVGKSATINSIFGE+K  ++ F+PATT V+EI+
Sbjct: 803  KRRAMQLEAEGKDDLNFSLNILVLGKSGVGKSATINSIFGEQKALINAFEPATTTVREII 862

Query: 465  GTIDGIKVRVLDTPGLRSSLKDQSLNRKILKSIRRFTKTCPPDVVIYVDRLDMQNRDLND 286
            GTIDG+K+RV DTPGL+SS  +Q +NRKIL SI++FTK CPPD+V+YVDRLD Q RDLND
Sbjct: 863  GTIDGVKIRVFDTPGLKSSFLEQGVNRKILSSIQKFTKKCPPDIVLYVDRLDAQTRDLND 922

Query: 285  LPLLKSITSSLGSSLWQKSLIILTHAISITPDGPSGEPLSYETFVALQSHVIRQLINHAI 106
            LPLL++ITSSLG S+W+ +++ LTH  S  PDGPSG PLSYET+V+ +SHV++Q I  A+
Sbjct: 923  LPLLRTITSSLGPSIWRSAIVTLTHGASAPPDGPSGAPLSYETYVSQRSHVVQQSIGQAV 982

Query: 105  GDQNMVNVGLVIPVCLVENHGLCKKSIDRQALLP 4
            GD  ++N  L+ PV LVENH  C+K+ D Q +LP
Sbjct: 983  GDLRLMNPSLMNPVSLVENHPSCRKNRDGQKVLP 1016


>ref|XP_004152365.1| PREDICTED: translocase of chloroplast 159, chloroplastic-like
            [Cucumis sativus]
          Length = 1528

 Score =  329 bits (843), Expect = 2e-87
 Identities = 187/394 (47%), Positives = 254/394 (64%), Gaps = 12/394 (3%)
 Frame = -2

Query: 1149 MELVFASDSLSGGESSRDHSKMMDEHFITYLDEDADPLGENEGELLFDYASFKALSDAAR 970
            +E    + S SG ESS DHS+ +D   +T  DE AD   E +G+ LFD A+  AL  AAR
Sbjct: 688  LERASGAGSHSGAESSIDHSQRIDGQIVTDSDE-ADTEDEGDGKELFDSAALAALLKAAR 746

Query: 969  GSETDDS-LAVTFADDSRNSSHEHSADLSSTISSTELTAQTDHPILSTSKR----FDXXX 805
             + +D   + VT  D SR  S E  A L S++ S +  ++   P+   S       D   
Sbjct: 747  DAGSDGGPITVTTQDGSRLFSIERPAGLGSSLISGKNASRPSRPLTFASSNPRVGDDAEN 806

Query: 804  XXXXXXXXKLD-VQHIKVKFLRLVQMLGLSAKEGIASQVLNQLDLAVEKTS------NDQ 646
                    KL  +Q I+V FLRLVQ LG+S  + + +QVL +  L   +++      ++ 
Sbjct: 807  KLSEEEKTKLQKLQKIRVNFLRLVQRLGVSPDDSLVAQVLYRFGLVAGRSTGQLFSFDNA 866

Query: 645  KAAIVDFEADFKKDMDFSLNILVIGKSGVGKSATINSIFGEEKTTVDPFKPATTAVKEIV 466
            K   +  EA+ K+D+DFSLNILV+GKSGVGKSATINSIFGE KT ++ F P TT VKEI+
Sbjct: 867  KNTAIQLEAEGKEDLDFSLNILVLGKSGVGKSATINSIFGENKTPINAFGPGTTTVKEII 926

Query: 465  GTIDGIKVRVLDTPGLRSSLKDQSLNRKILKSIRRFTKTCPPDVVIYVDRLDMQNRDLND 286
            GT++G+K+RV D+PGLRSS  ++ +N +IL SI+   K  PPD+V+YVDRLD Q RDLND
Sbjct: 927  GTVEGVKIRVFDSPGLRSSSSERRINNRILSSIKNVMKKFPPDIVLYVDRLDNQTRDLND 986

Query: 285  LPLLKSITSSLGSSLWQKSLIILTHAISITPDGPSGEPLSYETFVALQSHVIRQLINHAI 106
            L LL+S++SSLGSS+W+ ++I LTHA S  PDGPSG PL YE FVA +SHV++Q +  A+
Sbjct: 987  LLLLRSVSSSLGSSIWKNAIITLTHAASAPPDGPSGSPLGYEVFVAQRSHVLQQTVAQAV 1046

Query: 105  GDQNMVNVGLVIPVCLVENHGLCKKSIDRQALLP 4
            GD  ++N  L+ PV LVENH  C+K+ D Q +LP
Sbjct: 1047 GDLRILNPTLMNPVSLVENHPSCRKNRDGQKVLP 1080


>ref|XP_004156890.1| PREDICTED: translocase of chloroplast 159, chloroplastic-like
            [Cucumis sativus]
          Length = 1528

 Score =  326 bits (836), Expect = 1e-86
 Identities = 185/394 (46%), Positives = 253/394 (64%), Gaps = 12/394 (3%)
 Frame = -2

Query: 1149 MELVFASDSLSGGESSRDHSKMMDEHFITYLDEDADPLGENEGELLFDYASFKALSDAAR 970
            +E    + S SG ESS DHS+ +D   +T  DE AD   E +G+ LFD A+  AL  AAR
Sbjct: 688  LERASGAGSHSGAESSIDHSQRIDGQIVTDSDE-ADTEDEGDGKELFDSAALAALLKAAR 746

Query: 969  GSETDDS-LAVTFADDSRNSSHEHSADLSSTISSTELTAQTDHPILSTSKR----FDXXX 805
             + +D   + VT  D SR  S E  A L S++ S +  ++   P+   S       D   
Sbjct: 747  DAGSDGGPITVTTQDGSRLFSIERPAGLGSSLISGKNASRPSRPLTFASSNPRVGDDAEN 806

Query: 804  XXXXXXXXKLD-VQHIKVKFLRLVQMLGLSAKEGIASQVLNQLDLAVEKTS------NDQ 646
                    KL  +Q I+V FLRLVQ LG+S  + + + VL +  L   +++      ++ 
Sbjct: 807  KLSEEEKTKLQKLQKIRVNFLRLVQRLGVSPDDSLVAHVLYRFGLVAGRSTGQLFSFDNA 866

Query: 645  KAAIVDFEADFKKDMDFSLNILVIGKSGVGKSATINSIFGEEKTTVDPFKPATTAVKEIV 466
            K   +  EA+ K+D+DFSLNILV+GKSGVGKSATINSIFGE+KT ++ F P TT VKEI+
Sbjct: 867  KNTAIQLEAEGKEDLDFSLNILVLGKSGVGKSATINSIFGEDKTPINAFGPGTTTVKEII 926

Query: 465  GTIDGIKVRVLDTPGLRSSLKDQSLNRKILKSIRRFTKTCPPDVVIYVDRLDMQNRDLND 286
            GT++G+K+RV D+PGLRSS  ++ +N +IL SI+   K  PPD+V+YVDRLD Q RDLND
Sbjct: 927  GTVEGVKIRVFDSPGLRSSSSERRINNRILSSIKNVMKKFPPDIVLYVDRLDNQTRDLND 986

Query: 285  LPLLKSITSSLGSSLWQKSLIILTHAISITPDGPSGEPLSYETFVALQSHVIRQLINHAI 106
            L LL+S++SSLGSS+W+ ++I LTH  S  PDGPSG PL YE FVA +SHV++Q +  A+
Sbjct: 987  LLLLRSVSSSLGSSIWKNAIITLTHGASAPPDGPSGSPLGYEVFVAQRSHVLQQTVAQAV 1046

Query: 105  GDQNMVNVGLVIPVCLVENHGLCKKSIDRQALLP 4
            GD  ++N  L+ PV LVENH  C+K+ D Q +LP
Sbjct: 1047 GDLRILNPTLMNPVSLVENHPSCRKNRDGQKVLP 1080


>ref|XP_003532787.1| PREDICTED: translocase of chloroplast 159, chloroplastic-like
            [Glycine max]
          Length = 1184

 Score =  319 bits (817), Expect = 2e-84
 Identities = 182/407 (44%), Positives = 246/407 (60%), Gaps = 19/407 (4%)
 Frame = -2

Query: 1167 ENNSSVME-----LVFASDSLSGG--ESSRDHSKMMDEHFITYLDEDADPLGENEGELLF 1009
            E N SV +     LVF S   +    E    H     E  +T  DE+ +   E EG+ LF
Sbjct: 329  EINGSVSDEKGDGLVFGSTEAANKFLEDLELHQSRDAERIVTDSDEEEESDDEGEGKELF 388

Query: 1008 DYASFKALSDAARGSETDD-SLAVTFADDSRNSSHEHSADLSSTISSTELTAQTDHPILS 832
            D A+  AL  AA G++ D  S+ +T  D SR  S E  A L S + S +   +   P L 
Sbjct: 389  DTATLAALLKAASGADQDGGSITITSQDGSRLFSVERPAGLGSPLQSGKPAVRQTRPSLF 448

Query: 831  TSKR-----FDXXXXXXXXXXXKLDVQHIKVKFLRLVQMLGLSAKEGIASQVLNQLDLAV 667
            T                        +  I+VK+LRLV  LG + +E IA+QVL ++ L  
Sbjct: 449  TPSMSRPSAISDSNLSQEEKNKLEKLHEIRVKYLRLVHRLGFTTEESIAAQVLYRMTLVA 508

Query: 666  EKTSNDQ------KAAIVDFEADFKKDMDFSLNILVIGKSGVGKSATINSIFGEEKTTVD 505
             + S         K      EA+ + D DFS+NILV+GK+GVGKSATINSIFGE KT+++
Sbjct: 509  GRQSGQMFSVESAKETASRLEAEGRDDFDFSVNILVLGKAGVGKSATINSIFGETKTSIN 568

Query: 504  PFKPATTAVKEIVGTIDGIKVRVLDTPGLRSSLKDQSLNRKILKSIRRFTKTCPPDVVIY 325
               PATT+VKEIVG +DG+K+R+ DTPGL+SS  +Q+ N K+L ++++ TK  PPD+V+Y
Sbjct: 569  ACGPATTSVKEIVGVVDGVKLRIFDTPGLKSSALEQNFNMKVLSAVKKLTKKSPPDIVLY 628

Query: 324  VDRLDMQNRDLNDLPLLKSITSSLGSSLWQKSLIILTHAISITPDGPSGEPLSYETFVAL 145
            VDRLD+Q RD+NDLP+L+SITS LGSS+W+  ++ LTHA S  PDGPSG PLSYE FVA 
Sbjct: 629  VDRLDLQTRDMNDLPMLRSITSVLGSSIWRNVIVTLTHAASAPPDGPSGAPLSYEVFVAQ 688

Query: 144  QSHVIRQLINHAIGDQNMVNVGLVIPVCLVENHGLCKKSIDRQALLP 4
            +SH ++Q I  A+GD  ++N  L+ PV LVENH  C+K+ D Q +LP
Sbjct: 689  RSHTVQQTIGQAVGDLRLMNPSLMNPVSLVENHPSCRKNRDGQKVLP 735


>ref|XP_003524230.1| PREDICTED: translocase of chloroplast 159, chloroplastic-like
            [Glycine max]
          Length = 1240

 Score =  315 bits (806), Expect = 4e-83
 Identities = 175/404 (43%), Positives = 251/404 (62%), Gaps = 12/404 (2%)
 Frame = -2

Query: 1179 FNTVENNSSVMELVFASDSLSGGESSRDHSKMMDEHFITYLDEDADPLGENEGELLFDYA 1000
            F + +  +  +E +    S + G SSRD  +++ +      DE+ +   E +G+ LFD A
Sbjct: 393  FGSTDAANKFLEDLELQQSRASG-SSRDDGQIVSDS-----DEEEETDDEGDGKELFDTA 446

Query: 999  SFKALSDAARGSETDD-SLAVTFADDSRNSSHEHSADLSSTISSTELTAQTDHPILST-- 829
            +  AL  AA G++ D  S+ +T  D SR  S E  A L S++SS +   +   P L T  
Sbjct: 447  TLAALLKAASGADQDGGSITITSQDGSRLFSVERPAGLGSSLSSGKPAMRQTRPSLFTPS 506

Query: 828  ---SKRFDXXXXXXXXXXXKLDVQHIKVKFLRLVQMLGLSAKEGIASQVLNQLDLAVEKT 658
               +                  +  I+VK+LRLV  LG + +E IA+QVL ++     + 
Sbjct: 507  ISRASAISDSNLSEEEKKKLEKLHEIRVKYLRLVHRLGFTTEESIAAQVLYRMTHVAGRQ 566

Query: 657  SNDQ------KAAIVDFEADFKKDMDFSLNILVIGKSGVGKSATINSIFGEEKTTVDPFK 496
            S         K      EA+ + + DFS+NILV+GK+GVGKSATINSIFGE KT+++   
Sbjct: 567  SGQMFSVESAKETASQLEAEARDNFDFSVNILVLGKAGVGKSATINSIFGETKTSINACG 626

Query: 495  PATTAVKEIVGTIDGIKVRVLDTPGLRSSLKDQSLNRKILKSIRRFTKTCPPDVVIYVDR 316
            PATTAV EIVG +DG+K+R+ DTPGL+SS  +Q+ N K+L ++++ TK  PPD+V+YVDR
Sbjct: 627  PATTAVTEIVGVVDGVKIRIFDTPGLKSSAFEQNFNTKVLSAVKKLTKKSPPDIVLYVDR 686

Query: 315  LDMQNRDLNDLPLLKSITSSLGSSLWQKSLIILTHAISITPDGPSGEPLSYETFVALQSH 136
            LD+Q RD+NDLP+L+SITS LGSS+W+  ++ LTHA S  PDGPSG PLSY+ FVA +SH
Sbjct: 687  LDLQTRDMNDLPMLRSITSVLGSSIWRNVIVTLTHAASAPPDGPSGAPLSYDVFVAQRSH 746

Query: 135  VIRQLINHAIGDQNMVNVGLVIPVCLVENHGLCKKSIDRQALLP 4
            +++Q I  A+GD  ++N  L+ PV LVENH  C+K+ D Q +LP
Sbjct: 747  IVQQTIGQAVGDLRLMNPSLMNPVSLVENHPSCRKNRDGQKVLP 790


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