BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005526
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containi...   201   5e-50
emb|CBI16200.3| unnamed protein product [Vitis vinifera]              197   1e-48
ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containi...   193   1e-47
emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]   190   9e-47
ref|XP_002531100.1| pentatricopeptide repeat-containing protein,...   174   7e-42

>ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Vitis vinifera]
          Length = 501

 Score =  201 bits (511), Expect = 5e-50
 Identities = 95/146 (65%), Positives = 119/146 (81%)
 Frame = -3

Query: 523 LLVEMKKRRIKPDVVMYNILINYMCKDGRTMEAYRLLVEMQVEGCEPNAATYRIMVDGFC 344
           LL+EMK+RR KPDVV YNILIN++CK+GR +EAY++LVEMQV GCEPNAATYR+MVDGFC
Sbjct: 354 LLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGFC 413

Query: 343 NVGDFEGGLKVLNATLMSKHCPRAETFCCLIVGLTRSGKIDEACYVLDKINKRKLNIDLK 164
            V DFEGGLKVL+A LM  HCPR E+FC L+VGL ++GKID AC+VL+++ KRK+   L+
Sbjct: 414 QVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLE 473

Query: 163 SWESLVQVVSKRDEAAVELVSELISA 86
           +WE+LV+     D  A  LV EL+SA
Sbjct: 474 AWEALVKDACPGDRGAGGLVRELVSA 499



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/132 (29%), Positives = 70/132 (53%)
 Frame = -3

Query: 514 EMKKRRIKPDVVMYNILINYMCKDGRTMEAYRLLVEMQVEGCEPNAATYRIMVDGFCNVG 335
           EM  + +KP VV +N LI ++C  G    A  LL +M  +   PNA TY ++++G C++G
Sbjct: 252 EMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKRHRPNAVTYALLMEGLCSLG 311

Query: 334 DFEGGLKVLNATLMSKHCPRAETFCCLIVGLTRSGKIDEACYVLDKINKRKLNIDLKSWE 155
            ++   K++         PR   F  L+  L R G+ID++  +L ++ +R+   D+ ++ 
Sbjct: 312 KYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYN 371

Query: 154 SLVQVVSKRDEA 119
            L+  + K   A
Sbjct: 372 ILINHLCKEGRA 383


>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score =  197 bits (500), Expect = 1e-48
 Identities = 93/143 (65%), Positives = 116/143 (81%)
 Frame = -3

Query: 523  LLVEMKKRRIKPDVVMYNILINYMCKDGRTMEAYRLLVEMQVEGCEPNAATYRIMVDGFC 344
            LL+EMK+RR KPDVV YNILIN++CK+GR +EAY++LVEMQV GCEPNAATYR+MVDGFC
Sbjct: 716  LLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGFC 775

Query: 343  NVGDFEGGLKVLNATLMSKHCPRAETFCCLIVGLTRSGKIDEACYVLDKINKRKLNIDLK 164
             V DFEGGLKVL+A LM  HCPR E+FC L+VGL ++GKID AC+VL+++ KRK+   L+
Sbjct: 776  QVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLE 835

Query: 163  SWESLVQVVSKRDEAAVELVSEL 95
            +WE+LV+     D  A  LV EL
Sbjct: 836  AWEALVKDACPGDRGAGGLVREL 858



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/132 (29%), Positives = 70/132 (53%)
 Frame = -3

Query: 514  EMKKRRIKPDVVMYNILINYMCKDGRTMEAYRLLVEMQVEGCEPNAATYRIMVDGFCNVG 335
            EM  + +KP VV +N LI ++C  G    A  LL +M  +   PNA TY ++++G C++G
Sbjct: 614  EMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKRHRPNAVTYALLMEGLCSLG 673

Query: 334  DFEGGLKVLNATLMSKHCPRAETFCCLIVGLTRSGKIDEACYVLDKINKRKLNIDLKSWE 155
             ++   K++         PR   F  L+  L R G+ID++  +L ++ +R+   D+ ++ 
Sbjct: 674  KYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYN 733

Query: 154  SLVQVVSKRDEA 119
             L+  + K   A
Sbjct: 734  ILINHLCKEGRA 745


>ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Glycine max]
          Length = 449

 Score =  193 bits (491), Expect = 1e-47
 Identities = 87/145 (60%), Positives = 117/145 (80%)
 Frame = -3

Query: 523 LLVEMKKRRIKPDVVMYNILINYMCKDGRTMEAYRLLVEMQVEGCEPNAATYRIMVDGFC 344
           LL EMKKRR+KPDVV YNILINY+CK+G+ MEAY++L+EMQ+ GC PNAATYR++VDG C
Sbjct: 302 LLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEMQIGGCVPNAATYRMVVDGLC 361

Query: 343 NVGDFEGGLKVLNATLMSKHCPRAETFCCLIVGLTRSGKIDEACYVLDKINKRKLNIDLK 164
            +GDFE  L VLNA L S+HCPR+ETF C++VGL +SG ID +C+VL+++ KRKL  DL+
Sbjct: 362 QIGDFEVALSVLNAMLTSRHCPRSETFNCMVVGLLKSGNIDGSCFVLEEMEKRKLEFDLE 421

Query: 163 SWESLVQVVSKRDEAAVELVSELIS 89
           SWE++++     ++ A EL++ L S
Sbjct: 422 SWETIIKSACSENKGASELMTVLTS 446



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/132 (30%), Positives = 72/132 (54%)
 Frame = -3

Query: 514 EMKKRRIKPDVVMYNILINYMCKDGRTMEAYRLLVEMQVEGCEPNAATYRIMVDGFCNVG 335
           EM ++R++P VV YN LI ++C+ G   +A  LL +M  +G   N  TY ++++G C+V 
Sbjct: 200 EMLQKRVQPSVVTYNSLIGFLCRKGDLDKAMALLEDMGQKGKHANEVTYALLMEGLCSVE 259

Query: 334 DFEGGLKVLNATLMSKHCPRAETFCCLIVGLTRSGKIDEACYVLDKINKRKLNIDLKSWE 155
             E   K++          +   F  L+  L + GK++EA  +L ++ KR+L  D+ ++ 
Sbjct: 260 KTEEAKKLMFDMAYRGCKAQPVNFGVLMNDLGKRGKVEEAKSLLHEMKKRRLKPDVVTYN 319

Query: 154 SLVQVVSKRDEA 119
            L+  + K  +A
Sbjct: 320 ILINYLCKEGKA 331


>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
          Length = 1051

 Score =  190 bits (483), Expect = 9e-47
 Identities = 89/136 (65%), Positives = 110/136 (80%)
 Frame = -3

Query: 523  LLVEMKKRRIKPDVVMYNILINYMCKDGRTMEAYRLLVEMQVEGCEPNAATYRIMVDGFC 344
            LL+EMK+RR KPDVV YNILIN +CK+GR  EAY++LVEMQV GCEPNAATYR+MVDGFC
Sbjct: 645  LLLEMKRRRFKPDVVTYNILINXLCKEGRAXEAYKVLVEMQVGGCEPNAATYRMMVDGFC 704

Query: 343  NVGDFEGGLKVLNATLMSKHCPRAETFCCLIVGLTRSGKIDEACYVLDKINKRKLNIDLK 164
             V DFEGGLKVL+A LM  HCPR E+FC L+VGL ++GKID AC+VL+++ KRK+   L+
Sbjct: 705  QVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLE 764

Query: 163  SWESLVQVVSKRDEAA 116
            +WE+LV+     D  A
Sbjct: 765  AWEALVKDACPGDRGA 780



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/132 (29%), Positives = 69/132 (52%)
 Frame = -3

Query: 514 EMKKRRIKPDVVMYNILINYMCKDGRTMEAYRLLVEMQVEGCEPNAATYRIMVDGFCNVG 335
           EM  + +KP VV +N LI ++C  G    A  LL +M  +   PNA TY ++++G C++G
Sbjct: 543 EMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLZDMIQKRHRPNAVTYALLMEGLCSLG 602

Query: 334 DFEGGLKVLNATLMSKHCPRAETFCCLIVGLTRSGKIDEACYVLDKINKRKLNIDLKSWE 155
            ++   K++         PR   F  L+  L R G+ID+   +L ++ +R+   D+ ++ 
Sbjct: 603 KYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDXKTLLLEMKRRRFKPDVVTYN 662

Query: 154 SLVQVVSKRDEA 119
            L+  + K   A
Sbjct: 663 ILINXLCKEGRA 674


>ref|XP_002531100.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529296|gb|EEF31265.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 483

 Score =  174 bits (441), Expect = 7e-42
 Identities = 79/127 (62%), Positives = 103/127 (81%)
 Frame = -3

Query: 523 LLVEMKKRRIKPDVVMYNILINYMCKDGRTMEAYRLLVEMQVEGCEPNAATYRIMVDGFC 344
           LL+EMKKRR +PDVV+YNILIN++CK+G+  EAY+ L EMQ+ GCE NAATYR++ DGFC
Sbjct: 312 LLLEMKKRRFRPDVVIYNILINHLCKEGKVAEAYKTLFEMQIGGCEANAATYRMLADGFC 371

Query: 343 NVGDFEGGLKVLNATLMSKHCPRAETFCCLIVGLTRSGKIDEACYVLDKINKRKLNIDLK 164
            VG+FE GLKVLNA L+S+H PR ETF C +VGL +SG ID A +VL+++ KRK+ +D  
Sbjct: 372 QVGEFEEGLKVLNAMLVSRHAPRIETFNCFVVGLMKSGSIDGAFFVLEEMEKRKMALDSD 431

Query: 163 SWESLVQ 143
            WE+LV+
Sbjct: 432 GWEALVR 438



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/133 (32%), Positives = 76/133 (57%)
 Frame = -3

Query: 514 EMKKRRIKPDVVMYNILINYMCKDGRTMEAYRLLVEMQVEGCEPNAATYRIMVDGFCNVG 335
           EM +R+++P VV YN LI Y+C++G   +A  L  +M  +G  PNA TY ++++G C++G
Sbjct: 210 EMLERKVEPSVVTYNSLIGYLCRNGELGKAKGLFKDMIKKGKRPNAVTYALLMEGLCSMG 269

Query: 334 DFEGGLKVLNATLMSKHCPRAETFCCLIVGLTRSGKIDEACYVLDKINKRKLNIDLKSWE 155
           +++   K+L         P+   F  L+  L + GKI+EA  +L ++ KR+   D+  + 
Sbjct: 270 EYKEAKKMLFDMEYRGCKPKNLNFGVLMNDLGKKGKIEEAKLLLLEMKKRRFRPDVVIYN 329

Query: 154 SLVQVVSKRDEAA 116
            L+  + K  + A
Sbjct: 330 ILINHLCKEGKVA 342