BLASTX nr result

ID: Bupleurum21_contig00005523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005523
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252...   107   2e-21
emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]   107   2e-21
ref|XP_002520510.1| transcription initiation factor, putative [R...    83   3e-14
ref|XP_002510115.1| transcription initiation factor, putative [R...    78   1e-12
ref|XP_004148511.1| PREDICTED: uncharacterized protein LOC101206...    72   6e-11

>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
          Length = 922

 Score =  107 bits (266), Expect = 2e-21
 Identities = 75/208 (36%), Positives = 104/208 (50%), Gaps = 10/208 (4%)
 Frame = +3

Query: 3    QVSVHPGAGT---------MQSMGVPNKEKQNAVAEPMRMQGGNLSHSANHSKLHQNLAH 155
            QV +H   G+         M  M VP  E+Q++V +P R+QGG+L H +N S L Q+   
Sbjct: 402  QVPLHQNIGSTQMGGTSQAMNPMSVPKFERQSSVNDPKRVQGGSLPHPSNSSTLQQSSVP 461

Query: 156  SQLSVKEEQSHSALVSGRYVKQEPINQTNEQQRTXXXXXXXXXXXXXXXXXEQANASRN- 332
             Q S  +EQ    + S  YVKQEP +QTNEQQ+                  E+ NA    
Sbjct: 462  WQSSTNKEQ----ISSMAYVKQEPADQTNEQQQKSQLSTPQSLSSFPAVQVEKGNAIPGI 517

Query: 333  LSDVSIAMQQSRTGFSTSSDIMQSNTSLSHITTQLDSSTLVVSRLSSATPSVGPGSITKI 512
            L D S+  Q SR GFS+S  ++  N+  S + T LD +  + SR+ S T  VG    T+ 
Sbjct: 518  LKDESLEKQASRIGFSSSMSMLPPNSVSSSMGTHLDPNVTLGSRIPSVTSPVGIN--TRT 575

Query: 513  PMKKPITGLKKSTESLTPEASQPMQKKQ 596
            P KKP  G KK  E+L      P +K++
Sbjct: 576  PPKKPSIGQKKPLEALGSSPPLPSKKQK 603


>emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]
          Length = 906

 Score =  107 bits (266), Expect = 2e-21
 Identities = 75/208 (36%), Positives = 104/208 (50%), Gaps = 10/208 (4%)
 Frame = +3

Query: 3    QVSVHPGAGT---------MQSMGVPNKEKQNAVAEPMRMQGGNLSHSANHSKLHQNLAH 155
            QV +H   G+         M  M VP  E+Q++V +P R+QGG+L H +N S L Q+   
Sbjct: 447  QVPLHQNIGSTQMGGTSQAMNPMSVPKFERQSSVNDPKRVQGGSLPHPSNSSTLQQSSVP 506

Query: 156  SQLSVKEEQSHSALVSGRYVKQEPINQTNEQQRTXXXXXXXXXXXXXXXXXEQANASRN- 332
             Q S  +EQ    + S  YVKQEP +QTNEQQ+                  E+ NA    
Sbjct: 507  WQSSTNKEQ----ISSMAYVKQEPADQTNEQQQKSQLSTPQSLSSFPAVQVEKGNAIPGI 562

Query: 333  LSDVSIAMQQSRTGFSTSSDIMQSNTSLSHITTQLDSSTLVVSRLSSATPSVGPGSITKI 512
            L D S+  Q SR GFS+S  ++  N+  S + T LD +  + SR+ S T  VG    T+ 
Sbjct: 563  LKDESLEKQASRIGFSSSMSMLPPNSVSSSMGTHLDPNVTLGSRIPSVTSPVGIN--TRT 620

Query: 513  PMKKPITGLKKSTESLTPEASQPMQKKQ 596
            P KKP  G KK  E+L      P +K++
Sbjct: 621  PPKKPSIGQKKPLEALGSSPPLPSKKQK 648


>ref|XP_002520510.1| transcription initiation factor, putative [Ricinus communis]
           gi|223540352|gb|EEF41923.1| transcription initiation
           factor, putative [Ricinus communis]
          Length = 927

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 63/192 (32%), Positives = 90/192 (46%), Gaps = 1/192 (0%)
 Frame = +3

Query: 24  AGTMQSMGVPNKEKQNAVAEPMRMQGGNLSHSANHSKLHQNLAHSQLSVKEEQSHSALVS 203
           A  M  + V   E+ N+  +P ++Q G+ +   N S L  N A  Q    +EQ  S   S
Sbjct: 383 AQAMDMIKVSKFERPNSGTDPNKVQSGSAAQYTNKSALQPNSAPWQPPTNKEQKSSPFPS 442

Query: 204 GRYVKQEPINQTNEQQRTXXXXXXXXXXXXXXXXXEQANA-SRNLSDVSIAMQQSRTGFS 380
             YVKQEP+ Q  EQ +                  EQ NA + NL   S+  Q S+ G S
Sbjct: 443 KNYVKQEPVEQATEQHQ---KSQLSNPQDLSAAPVEQGNAVTSNLKVDSLEKQSSKVGIS 499

Query: 381 TSSDIMQSNTSLSHITTQLDSSTLVVSRLSSATPSVGPGSITKIPMKKPITGLKKSTESL 560
             S ++ S++  + I T+LD    V S++ S   S  PG   + P KKP+ G KK  E+L
Sbjct: 500 IPSSMVPSSSVSTSIATRLDPIIQVGSQIQSIAAS--PGVNARTPPKKPLIGQKKPLEAL 557

Query: 561 TPEASQPMQKKQ 596
              +S PM  K+
Sbjct: 558 --GSSPPMSSKK 567


>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
           gi|223550816|gb|EEF52302.1| transcription initiation
           factor, putative [Ricinus communis]
          Length = 925

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 62/190 (32%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
 Frame = +3

Query: 30  TMQSMGVPNKEKQNAVAEPMRMQGGNLSHSANHSKLHQNLAHSQLSVKEEQSHSALVSGR 209
           T+  + V   E+ N+V++P R+Q G++S   N S L QN    Q    +EQ+     S  
Sbjct: 418 TLNMVHVSKFERPNSVSDPSRVQSGSMSQYNNKSALPQNSIPWQAPTNKEQTSPLFPSTN 477

Query: 210 YVKQEPINQTNEQQRTXXXXXXXXXXXXXXXXXEQANA-SRNLSDVSIAMQQSRTGFSTS 386
           YVKQEP+ Q  +QQ+                  EQ NA   N  + S+    S+ GFS  
Sbjct: 478 YVKQEPLEQATDQQQ---KPQLSNPQGLSAAPGEQGNAVPVNSKEDSLEKPSSKVGFSNP 534

Query: 387 SDIMQSNTSLSHITTQLDSSTLVVSRLSSATPSVGPGSITKIPMKKPITGLKKSTESLTP 566
           S  + SN+    I  Q D +     R  S   SVG  + T  P KK   G KK  E+L  
Sbjct: 535 STAVPSNSVSPSIAIQPDPNIQAGPRFPSGAASVGVNART--PTKKLSIGQKKPLEAL-- 590

Query: 567 EASQPMQKKQ 596
            +S PM  K+
Sbjct: 591 GSSPPMSSKK 600


>ref|XP_004148511.1| PREDICTED: uncharacterized protein LOC101206316 [Cucumis sativus]
           gi|449521952|ref|XP_004167993.1| PREDICTED:
           uncharacterized LOC101206316 [Cucumis sativus]
          Length = 898

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 59/195 (30%), Positives = 88/195 (45%), Gaps = 3/195 (1%)
 Frame = +3

Query: 15  HPGAGTMQSMGVPNKEKQNAVAEPMRMQGGNLSHSANHSKLHQNLAHSQLSVKEEQSHSA 194
           H G     S   PN ++Q  + +  R+Q G++ H      LH NL   Q S K   S   
Sbjct: 398 HEGQVKQISQQAPNFDRQVTINDSKRVQAGSVPH------LHNNLTSQQNSWKSSTSKEQ 451

Query: 195 LVSGRYVKQEPINQTNEQQRTXXXXXXXXXXXXXXXXXEQANASRNLSDVSIAMQQSRTG 374
            ++  YVKQEP +Q +EQ +T                 EQ N +  ++      Q S+ G
Sbjct: 452 TITS-YVKQEPSDQVSEQSKT-QHSNLQGLSSIPSMQAEQVNTNPGIAKDPFDKQTSKMG 509

Query: 375 FSTSSDIMQSNTSLSHITTQLDSSTLVVSRLSSATPS-VGPGSITKIPMKKPITGLKKST 551
           F T +++M   ++ +  +   DSS+L  S  ++A PS   PG   + P KK   G KK  
Sbjct: 510 FPTPNNVMPPTSTNAANSISSDSSSLHES--NAAVPSATTPGMQNRAPQKKAAVGQKKPL 567

Query: 552 ESL--TPEASQPMQK 590
           E+L  +P  S   QK
Sbjct: 568 EALGSSPPLSSKKQK 582


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