BLASTX nr result

ID: Bupleurum21_contig00005515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005515
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD22330.1| putative non-LTR retroelement reverse transcripta...   130   1e-28
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   130   1e-28
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                129   2e-28
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694...   127   7e-28
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   127   1e-27

>gb|AAD22330.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 631

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/141 (47%), Positives = 88/141 (62%), Gaps = 2/141 (1%)
 Frame = -1

Query: 431 FDSVSWKFLLQVLASHNFPTRFIDWIKACICNHWFSIKVNGTLNGFFKGERGLRQGDPIS 252
           FDSV W+FLL  L + NFP +   WIK CI    FS++VNG L GFF  +RGLRQG  +S
Sbjct: 174 FDSVQWQFLLNTLEALNFPEKIRHWIKLCISTATFSVQVNGELAGFFGNKRGLRQGCALS 233

Query: 251 PYLFTLVMNALSMRLNNSPV--GFKHHWKCKDLNLTHLLFADDVILFCHASKDSIDFLMK 78
           PYLF + MN LS  ++ + V     +H KCK L+LTHL F DD+++F    + SI+ ++ 
Sbjct: 234 PYLFVICMNVLSHMIDEAAVRRNIGYHPKCKKLSLTHLCFVDDLMVFIDGQQRSIEGVIN 293

Query: 77  SIHTFAEDSGLQPSLNKSQCF 15
             H FA  SGL  SL KS  +
Sbjct: 294 IFHEFAGKSGLHISLEKSTLY 314


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  130 bits (326), Expect = 1e-28
 Identities = 65/144 (45%), Positives = 87/144 (60%), Gaps = 3/144 (2%)
 Frame = -1

Query: 431  FDSVSWKFLLQVLASHNFPTRFIDWIKACICNHWFSIKVNGTLNGFFKGERGLRQGDPIS 252
            +DSV W FL  +L    FP+RF+ WI  C+    +S+ VNG     F+  +GLRQGDP+S
Sbjct: 589  YDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDPMS 648

Query: 251  PYLFTLVMNALSM---RLNNSPVGFKHHWKCKDLNLTHLLFADDVILFCHASKDSIDFLM 81
            P+LF L M  LS     L  SP  F  H KC+ LN+THL+FADD+++FC A K S+D + 
Sbjct: 649  PFLFALCMEYLSRCLEELKGSP-DFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMN 707

Query: 80   KSIHTFAEDSGLQPSLNKSQCFFC 9
             +   F+  SGL  S  KS  +FC
Sbjct: 708  VAFQKFSHASGLAASHEKSNIYFC 731


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  129 bits (324), Expect = 2e-28
 Identities = 67/141 (47%), Positives = 88/141 (62%), Gaps = 2/141 (1%)
 Frame = -1

Query: 431 FDSVSWKFLLQVLASHNFPTRFIDWIKACICNHWFSIKVNGTLNGFFKGERGLRQGDPIS 252
           FDSV W+FLL  L + NFP  F  WIK CI    FS++VNG L GFF  +RGLRQG  +S
Sbjct: 177 FDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALS 236

Query: 251 PYLFTLVMNALSMRLNNSPV--GFKHHWKCKDLNLTHLLFADDVILFCHASKDSIDFLMK 78
           PYLF + MN LS  ++ + V     +H KCK L+LTHL FADD+++F    + S++ ++ 
Sbjct: 237 PYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVIN 296

Query: 77  SIHTFAEDSGLQPSLNKSQCF 15
               FA  SGL  SL KS  +
Sbjct: 297 IFKEFAGKSGLHISLEKSTLY 317


>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
            putative protein [Arabidopsis thaliana]
          Length = 1141

 Score =  127 bits (320), Expect = 7e-28
 Identities = 64/143 (44%), Positives = 92/143 (64%), Gaps = 2/143 (1%)
 Frame = -1

Query: 431  FDSVSWKFLLQVLASHNFPTRFIDWIKACICNHWFSIKVNGTLNGFFKGERGLRQGDPIS 252
            FDSV W+F++  L +   PT+FI+WI  CI    F++ VNG   GFFK  +GLRQGDP+S
Sbjct: 576  FDSVRWEFIIAALLALGVPTKFINWIHQCISTPTFTVSVNGCCGGFFKSAKGLRQGDPLS 635

Query: 251  PYLFTLVMNALSMRLNNS-PVGF-KHHWKCKDLNLTHLLFADDVILFCHASKDSIDFLMK 78
            PYLF L M   S  LN+    G+ ++H K  DL+++HL+FADDV++F      S+  + +
Sbjct: 636  PYLFVLAMEVFSKLLNSRFDSGYIRYHPKASDLSISHLMFADDVMIFFDGGSSSLHGICE 695

Query: 77   SIHTFAEDSGLQPSLNKSQCFFC 9
            ++  FA  SGL+ + +KS  FFC
Sbjct: 696  TLEDFASWSGLKVNNDKSH-FFC 717


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/141 (43%), Positives = 90/141 (63%), Gaps = 2/141 (1%)
 Frame = -1

Query: 431 FDSVSWKFLLQVLASHNFPTRFIDWIKACICNHWFSIKVNGTLNGFFKGERGLRQGDPIS 252
           FDS+ W FL+  L++ NFP  FI WI  CI    FS++VNG L G+F+  RG+RQG  +S
Sbjct: 9   FDSLQWSFLINALSAMNFPGEFIHWISRCITTTSFSVQVNGELAGYFRSARGIRQGCALS 68

Query: 251 PYLFTLVMNALSMRLNNSPVG--FKHHWKCKDLNLTHLLFADDVILFCHASKDSIDFLMK 78
           PYLF + M  LS  L+ +  G  F  H KCK+L LTHL FADD+++       S+D +++
Sbjct: 69  PYLFVISMEVLSKMLDQAAGGKRFGFHPKCKNLGLTHLCFADDLMILTDGKVRSVDGIVE 128

Query: 77  SIHTFAEDSGLQPSLNKSQCF 15
            ++ FA+ SGLQ ++ K+  +
Sbjct: 129 VMNLFAKRSGLQINMEKTTLY 149


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