BLASTX nr result

ID: Bupleurum21_contig00005508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005508
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF49443.1| transcription factor DcMYB3-2 [Daucus carota]          87   1e-15
dbj|BAF49442.1| transcription factor DcMYB3-1 [Daucus carota]          81   8e-14
dbj|BAF49445.1| transcription factor DcMYB5 [Daucus carota]            62   4e-08

>dbj|BAF49443.1| transcription factor DcMYB3-2 [Daucus carota]
          Length = 286

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 62/160 (38%), Positives = 81/160 (50%), Gaps = 12/160 (7%)
 Frame = +1

Query: 1   EIKNYWNTTLRKKAHDNHTNSVSSPPKTPT------XXXXXXXXXXXXDPITHEAILDSQ 162
           EIKNYWNTTLRKKAHDNHT S ++ PKTPT                  +PI  E   ++ 
Sbjct: 103 EIKNYWNTTLRKKAHDNHTTSAAASPKTPTKQCNNKKTKKHKKKREKSEPIKPEIKANAS 162

Query: 163 LVHTPALQSTESSTSRKTDDHSLDEPPIEPKEDNIPT---QNLEPSGIDSSDICLTK--H 327
            V   A  + + +  +     S  EP ++P   N  T    +L P G+DSSD+CLT   +
Sbjct: 163 DVRAKA--ALDEADHQLITSTSTMEPLVQPALQNKTTDQSSDLVP-GVDSSDMCLTDFLN 219

Query: 328 DDFPSLFGLN-NYSRDDNEIKSMSASSSYEILDTLEEFWN 444
            DF  L   + N+   D E  S  +SS   I+  LEEFWN
Sbjct: 220 YDFSGLLNTDINHQDYDMESASPCSSSEKPIMQILEEFWN 259


>dbj|BAF49442.1| transcription factor DcMYB3-1 [Daucus carota]
          Length = 285

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 60/164 (36%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
 Frame = +1

Query: 1   EIKNYWNTTLRKKAHDNHTNSVSSPPKTPT------XXXXXXXXXXXXDPITHEAILDSQ 162
           EIKNYWNTTLRKKAHDNHT+S ++ PKTPT                  +PI  E   ++ 
Sbjct: 103 EIKNYWNTTLRKKAHDNHTSSAAA-PKTPTKQCNNKKTKKHKKKREKSEPIKPEIKANAS 161

Query: 163 LVHTPALQS-------TESSTSRKTDDHSLDEPPIEPKEDNIPTQNLEPSGIDSSDICLT 321
            V   A          T +ST       +L     +   D +P       G+DSSD+CLT
Sbjct: 162 DVRAKAALDEADHQLITSTSTMEPLVQQALQNKTTDQSSDLVP-------GVDSSDMCLT 214

Query: 322 K--HDDFPSLFGLN-NYSRDDNEIKSMSASSSYEILDTLEEFWN 444
              + DF  L   + N+   D E  S  +SS   I+  LEEFWN
Sbjct: 215 DFLNYDFSGLLNTDINHQDYDMESASPCSSSEKPIMQILEEFWN 258


>dbj|BAF49445.1| transcription factor DcMYB5 [Daucus carota]
          Length = 297

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 54/167 (32%), Positives = 75/167 (44%), Gaps = 19/167 (11%)
 Frame = +1

Query: 1   EIKNYWNTTLRKKAHDNHTNSVSSPP-------KTPTXXXXXXXXXXXXDPITHEAILDS 159
           EIKNYWNTTLRKK H N T S S+ P       K  +               TH+ +  S
Sbjct: 103 EIKNYWNTTLRKKTHVNQTTSTSASPTPKSSRTKQCSTEKKRKKKDKKNVESTHQNVASS 162

Query: 160 QLVH----TPALQSTESSTSRKTDDHSLDEPPIEPKED---NIPTQNLEPSGIDSSDICL 318
           Q+ H    TP            T    L    + PK+D   N  + +L P  +DSSD+  
Sbjct: 163 QVTHHSLITPPKSDHHPILMDTTSPEPLAAQNLMPKQDSSSNGQSLDLVPD-VDSSDMGF 221

Query: 319 TK--HDDFPSLFGLNNYSRDDNEIKSMSASSSYE--ILDTL-EEFWN 444
            +    DF  L   NN  + D++I++ S  S  E  ++D L +EFW+
Sbjct: 222 KELLDFDFSGLLDTNNDDQRDSKIETTSLISLNENPLMDVLVDEFWS 268


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