BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005507
         (1708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264290.1| PREDICTED: transcription initiation factor T...   743   0.0  
ref|XP_003518649.1| PREDICTED: transcription initiation factor T...   729   0.0  
ref|XP_002528944.1| transcription initiation factor tfiid, putat...   704   0.0  
ref|XP_002320500.1| predicted protein [Populus trichocarpa] gi|2...   702   0.0  
ref|XP_003621904.1| Transcription initiation factor TFIID subuni...   695   0.0  

>ref|XP_002264290.1| PREDICTED: transcription initiation factor TFIID subunit 6 [Vitis
            vinifera] gi|297739126|emb|CBI28777.3| unnamed protein
            product [Vitis vinifera]
          Length = 543

 Score =  743 bits (1919), Expect = 0.0
 Identities = 379/549 (69%), Positives = 438/549 (79%), Gaps = 6/549 (1%)
 Frame = +2

Query: 71   MSIVPKETVEVIAQTIGINNLTXXXXXXXXXXVEYRMREIMQEAIKCMRHSRRTTLTTDD 250
            MSIV KET+EVIAQ+IGI NL+          VEYRMRE+MQEAIKCMRHS+RT LTTDD
Sbjct: 1    MSIVSKETIEVIAQSIGIANLSADVALALAPDVEYRMREVMQEAIKCMRHSKRTVLTTDD 60

Query: 251  IDSALKLRNVEPIYGFASGDPLRFRRALGHXXXXXXXXXXXXXXXXIEASLPKAPLDTSI 430
            +D AL LRNVEPIYGF SG PLRF+RA+GH                IEA LPKAPLD ++
Sbjct: 61   VDIALNLRNVEPIYGFTSGGPLRFKRAVGHKNLFYIDDKDLDFKDVIEAPLPKAPLDAAV 120

Query: 431  VCHWLAIEGVQPAIPENAPVEAITAPSETNKADKKDNELPVDIKLPVKHVLSRELQLYFN 610
            VCHWLAIEGVQPAIPENAPVE I APS+  K ++KD+ LPVDIKLP+KHVLSRELQLYF+
Sbjct: 121  VCHWLAIEGVQPAIPENAPVEVIAAPSDGKKFEQKDDGLPVDIKLPIKHVLSRELQLYFD 180

Query: 611  RITELTLSRSDMVLFKEAMASLATDSGLHPLVPYFTCFIADEVARGLTEFNVLFALMRVV 790
            +I +LT++RSD  LFKEA+ SLATDSGLHPLVPYFT FI+DEV+RGL +FN+LFALMRVV
Sbjct: 181  KIIDLTVNRSDSALFKEALVSLATDSGLHPLVPYFTYFISDEVSRGLNDFNLLFALMRVV 240

Query: 791  WSLLQNPHIHIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTANLVAFICRKFGHI 970
            WSLLQNPHIHIEPYLHQLMPSVVTCLVAKR+GNRLADNHWELRDFTANLVA IC++FGH+
Sbjct: 241  WSLLQNPHIHIEPYLHQLMPSVVTCLVAKRIGNRLADNHWELRDFTANLVASICKRFGHV 300

Query: 971  YNSLQTRLTKTLLNAFLDPKRAMTQHYGAVQGLAALGPNVVRLLILPNLEAYLKLLEPEM 1150
            YN+LQTRLTKTLL+AFLDPKR+MTQHYGA+QGLAALGPN+VRLLI+PNLE YL+LLEPEM
Sbjct: 301  YNNLQTRLTKTLLHAFLDPKRSMTQHYGAIQGLAALGPNMVRLLIVPNLEPYLRLLEPEM 360

Query: 1151 LFEKQNNELKRYEAWRVYGALLRAAGQSIYDKLKMFPPLPSPPAHGVWRKNARIITSYPT 1330
            L EKQ NELKR+EAW VYGALLRA GQSIYD+LKMFP LPSPPA  V+R N R++TS P 
Sbjct: 361  LLEKQKNELKRHEAWCVYGALLRATGQSIYDRLKMFPALPSPPAR-VFRTNGRVVTS-PP 418

Query: 1331 NKRTANSEDLEHQPPLKKVATDGA--IVP---ESNNTPPSEMQRVTRAP-EXXXXXXXXX 1492
            NKR AN+E LE QP LKK+ATDG   +VP    SN  PP      T+ P           
Sbjct: 419  NKRKANNEHLEQQPSLKKIATDGPMDVVPTNLSSNMQPPE-----TKGPVPSTDPDMGPS 473

Query: 1493 XXXXQIPNENDKNSKVGRERSESEAVRMKALLNQTWKDDLESGQVLGKLFELFGERIFPF 1672
                QIP+ N  +S+  + + +S A++M A+L QTW+DDL+SG +L  LFELFGE I PF
Sbjct: 474  SSSRQIPHGNISDSRDRKGKGDSRALKMSAVLTQTWRDDLKSGHLLVSLFELFGESILPF 533

Query: 1673 VPTPELSLF 1699
            +P PE+SLF
Sbjct: 534  IPAPEMSLF 542


>ref|XP_003518649.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
            [Glycine max]
          Length = 544

 Score =  729 bits (1883), Expect = 0.0
 Identities = 363/544 (66%), Positives = 428/544 (78%), Gaps = 1/544 (0%)
 Frame = +2

Query: 71   MSIVPKETVEVIAQTIGINNLTXXXXXXXXXXVEYRMREIMQEAIKCMRHSRRTTLTTDD 250
            MSIVPKET+EVIAQ+IGINNL+          VEYRMR+IMQEAIKCMRHS+RTTLT DD
Sbjct: 1    MSIVPKETIEVIAQSIGINNLSHDVALAVAPDVEYRMRQIMQEAIKCMRHSKRTTLTADD 60

Query: 251  IDSALKLRNVEPIYGFASGDPLRFRRALGHXXXXXXXXXXXXXXXXIEASLPKAPLDTSI 430
            +D+AL L+NVEPIYGFASG PLRF+RA+GH                IEASLPKAPLDT++
Sbjct: 61   VDAALNLKNVEPIYGFASGGPLRFKRAVGHRDLFYIDDKDVDLKDVIEASLPKAPLDTAV 120

Query: 431  VCHWLAIEGVQPAIPENAPVEAITAPSETNKADKKDNELPVDIKLPVKHVLSRELQLYFN 610
             CHWLAIEGVQPAIPENAPVE I+APS+  K ++KD+ LPVDIKLPVKHVLSRELQLYF+
Sbjct: 121  TCHWLAIEGVQPAIPENAPVEVISAPSDVKKHEQKDDNLPVDIKLPVKHVLSRELQLYFD 180

Query: 611  RITELTLSRSDMVLFKEAMASLATDSGLHPLVPYFTCFIADEVARGLTEFNVLFALMRVV 790
            ++ ELTLS SD VLFKEA+ SLATDSGLHPLVPYFTCFIADEV+RGL  F +LFALMRVV
Sbjct: 181  KVAELTLSESDSVLFKEALVSLATDSGLHPLVPYFTCFIADEVSRGLNNFPLLFALMRVV 240

Query: 791  WSLLQNPHIHIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTANLVAFICRKFGHI 970
             SLLQNPHI IEPYLHQLMPSVVTCLVAKRLG RLADNHWELRDFTA+LVA IC++FGH+
Sbjct: 241  SSLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGTRLADNHWELRDFTAHLVASICKRFGHV 300

Query: 971  YNSLQTRLTKTLLNAFLDPKRAMTQHYGAVQGLAALGPNVVRLLILPNLEAYLKLLEPEM 1150
            Y++LQ+RLTKTLLNAFLDPK+A+TQHYGA+QGL ALGPNVVRLL+LPNLE Y++LLEPEM
Sbjct: 301  YSNLQSRLTKTLLNAFLDPKKALTQHYGAIQGLGALGPNVVRLLLLPNLETYMQLLEPEM 360

Query: 1151 LFEKQNNELKRYEAWRVYGALLRAAGQSIYDKLKMFPPLPSPPAHGVWRKNARIITSYPT 1330
            L EKQ NELKR+EAWRVYGALLRAAGQ IYD+LK+FP  PSPP H VW+ N++++TS  T
Sbjct: 361  LLEKQKNELKRHEAWRVYGALLRAAGQCIYDRLKIFPTFPSPPLHAVWKTNSKVLTS-ST 419

Query: 1331 NKRTANSEDLEHQPPLKKVATDGAI-VPESNNTPPSEMQRVTRAPEXXXXXXXXXXXXXQ 1507
             KR A+ + LE QPPLKK ATDG + V   N +P  + +                    Q
Sbjct: 420  YKRKASPDQLEQQPPLKKAATDGEVGVDLMNFSPVHKQEEAGTQASSADSIIGTSSSSAQ 479

Query: 1508 IPNENDKNSKVGRERSESEAVRMKALLNQTWKDDLESGQVLGKLFELFGERIFPFVPTPE 1687
            + NE   + ++  +R +++A++  A L Q WKD+L SG+ L  LFELFGE I  F+  PE
Sbjct: 480  MKNETTLDGELRGKRGDTQALKTSAALTQVWKDELNSGRTLVSLFELFGEGILSFIKAPE 539

Query: 1688 LSLF 1699
            + +F
Sbjct: 540  MYMF 543


>ref|XP_002528944.1| transcription initiation factor tfiid, putative [Ricinus communis]
            gi|223531590|gb|EEF33418.1| transcription initiation
            factor tfiid, putative [Ricinus communis]
          Length = 542

 Score =  704 bits (1817), Expect = 0.0
 Identities = 356/544 (65%), Positives = 418/544 (76%), Gaps = 1/544 (0%)
 Frame = +2

Query: 71   MSIVPKETVEVIAQTIGINNLTXXXXXXXXXXVEYRMREIMQEAIKCMRHSRRTTLTTDD 250
            MSIVPKET+EVIAQ+IGI NL+          VEYRMREIMQEAIKCMRHS+RTTLT  D
Sbjct: 1    MSIVPKETIEVIAQSIGITNLSEDAALSLTPDVEYRMREIMQEAIKCMRHSKRTTLTCYD 60

Query: 251  IDSALKLRNVEPIYGFASGDPLRFRRALGHXXXXXXXXXXXXXXXXIEASLPKAPLDTSI 430
            +D AL LRN+EP+YG ASG  L+F+RA+GH                IEA LPKAPLDTSI
Sbjct: 61   VDGALNLRNIEPVYGVASGGALQFKRAIGHRDLFYIDDKDIDFKDVIEAPLPKAPLDTSI 120

Query: 431  VCHWLAIEGVQPAIPENAPVEAITAPSETNKADKKDNELPVDIKLPVKHVLSRELQLYFN 610
            VCHWLAIEGVQPAIPENAP+E I  P +    + KD  LPVDIKLPV+HVLSRELQLYF+
Sbjct: 121  VCHWLAIEGVQPAIPENAPLEVIAPPPDGKNNELKDG-LPVDIKLPVRHVLSRELQLYFD 179

Query: 611  RITELTLSRSDMVLFKEAMASLATDSGLHPLVPYFTCFIADEVARGLTEFNVLFALMRVV 790
            +ITELT+ RSD+ LFKEA+ SLATD GLHPLVPYFTCFIADEV+R L++F +LFALMRVV
Sbjct: 180  KITELTMRRSDLPLFKEALVSLATDPGLHPLVPYFTCFIADEVSRSLSDFQLLFALMRVV 239

Query: 791  WSLLQNPHIHIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTANLVAFICRKFGHI 970
             SLLQNPHIHIEPYLHQLMPSVVTCLVAKRLGNR ADNHWELRDFTANLVA IC++FGH+
Sbjct: 240  RSLLQNPHIHIEPYLHQLMPSVVTCLVAKRLGNRFADNHWELRDFTANLVASICKRFGHV 299

Query: 971  YNSLQTRLTKTLLNAFLDPKRAMTQHYGAVQGLAALGPNVVRLLILPNLEAYLKLLEPEM 1150
            Y+SLQTRLTKTLLNA  DPKR++TQHYGA+QGLAALGPNVVR L+LPNL+ YL++LEPEM
Sbjct: 300  YSSLQTRLTKTLLNALFDPKRSLTQHYGAIQGLAALGPNVVRFLVLPNLKPYLQVLEPEM 359

Query: 1151 LFEKQNNELKRYEAWRVYGALLRAAGQSIYDKLKMFPPLPSPPAHGVWRKNARIITSYPT 1330
            L EKQ NE+KR+EAW VYGALL AAGQ +YD+LK+FP  PSPPAH VWR N +IIT+   
Sbjct: 360  LLEKQKNEMKRHEAWLVYGALLNAAGQCLYDRLKLFPLFPSPPAHAVWRTNGKIITA-QL 418

Query: 1331 NKRTANSEDLEHQPPLKKVATDGAIVPESNNTPPSEMQ-RVTRAPEXXXXXXXXXXXXXQ 1507
            NKR A+ +  E QP  K++ATD  +   S ++ PS MQ   T                 Q
Sbjct: 419  NKRKASMQPAE-QPLPKRIATDDPVNALSTDSSPSRMQWEATTPVPSSDTNASASTSSEQ 477

Query: 1508 IPNENDKNSKVGRERSESEAVRMKALLNQTWKDDLESGQVLGKLFELFGERIFPFVPTPE 1687
            +P  ++ + K  R + +   ++  A+LNQ WKDDL+SGQ+L  LFELFGE I  F+P+PE
Sbjct: 478  MPTNHESDCKTERVKGDGGVMKTSAILNQVWKDDLKSGQLLASLFELFGEGILSFIPSPE 537

Query: 1688 LSLF 1699
            +SLF
Sbjct: 538  MSLF 541


>ref|XP_002320500.1| predicted protein [Populus trichocarpa] gi|222861273|gb|EEE98815.1|
            predicted protein [Populus trichocarpa]
          Length = 532

 Score =  702 bits (1812), Expect = 0.0
 Identities = 358/544 (65%), Positives = 426/544 (78%), Gaps = 1/544 (0%)
 Frame = +2

Query: 71   MSIVPKETVEVIAQTIGINNLTXXXXXXXXXXVEYRMREIMQEAIKCMRHSRRTTLTTDD 250
            MSIV KET+EVIAQ+IGI+NL+          VE+RMR+IMQEAIKCMRHS+RT LTTDD
Sbjct: 1    MSIVAKETIEVIAQSIGISNLSEDVALTLAPDVEFRMRQIMQEAIKCMRHSKRTRLTTDD 60

Query: 251  IDSALKLRNVEPIYGFASGDPLRFRRALGHXXXXXXXXXXXXXXXXIEASLPKAPLDTSI 430
            +D AL L NVEPIYGFASG  L+F+RA+GH                IEA LPKAPLDT++
Sbjct: 61   VDGALNLTNVEPIYGFASGGALQFKRAIGHRDLFYVDDKDIDFKDVIEAPLPKAPLDTAV 120

Query: 431  VCHWLAIEGVQPAIPENAPVEAITAPSETNKADKKDNELPVDIKLPVKHVLSRELQLYFN 610
            VCHWLAIEGVQPAIPENAP+E I  PS+  K  ++++E PVDIKLPVKHVLSRELQLYF+
Sbjct: 121  VCHWLAIEGVQPAIPENAPLEVIAPPSD-GKISEQNDEFPVDIKLPVKHVLSRELQLYFD 179

Query: 611  RITELTLSRSDMVLFKEAMASLATDSGLHPLVPYFTCFIADEVARGLTEFNVLFALMRVV 790
            +IT+LT+ RSD VLFKEA+ SLATDSGLHPL+PYFT FIADEVARGL ++++LFALMRVV
Sbjct: 180  KITDLTVRRSDSVLFKEALVSLATDSGLHPLIPYFTYFIADEVARGLNDYSLLFALMRVV 239

Query: 791  WSLLQNPHIHIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTANLVAFICRKFGHI 970
            WSLLQNPHIHIEPYLHQLMPSVVTCLVA++LGNR ADNHWELRDFTANLVA IC++FGH+
Sbjct: 240  WSLLQNPHIHIEPYLHQLMPSVVTCLVARKLGNRFADNHWELRDFTANLVASICKRFGHV 299

Query: 971  YNSLQTRLTKTLLNAFLDPKRAMTQHYGAVQGLAALGPNVVRLLILPNLEAYLKLLEPEM 1150
            YNSLQTRLTKTLLNA LDPKR++TQHYGA+QGLAALGPNVVRLL+LPNL+ YL+LLEPEM
Sbjct: 300  YNSLQTRLTKTLLNALLDPKRSLTQHYGAIQGLAALGPNVVRLLLLPNLKPYLQLLEPEM 359

Query: 1151 LFEKQNNELKRYEAWRVYGALLRAAGQSIYDKLKMFPPLPSPPAHGVWRKNARIITSYPT 1330
            L EKQ NE+KR+EAW VYGALL AAGQSIYD+LKMFP L S PA  V R N +++T  P 
Sbjct: 360  LLEKQKNEMKRHEAWHVYGALLCAAGQSIYDRLKMFPALMSHPACAVLRTNEKVVTKRP- 418

Query: 1331 NKRTANSEDLEHQPPLKKVATDGAIVPESNNTPPSEMQRVTRAPEXXXXXXXXXXXXXQ- 1507
            +KR A+ E +E QPP KK+ATDG          P +MQ    AP              + 
Sbjct: 419  DKRKASMEHME-QPPPKKIATDG----------PVDMQVEPIAPVPLGDSKTGLSTSSEH 467

Query: 1508 IPNENDKNSKVGRERSESEAVRMKALLNQTWKDDLESGQVLGKLFELFGERIFPFVPTPE 1687
             PN ++  S+  +++ +S+A++  A+L+Q WKDDL SG +L  LFELFGE I  F+P+PE
Sbjct: 468  TPNYSEAGSRNQKDKGDSQAIKTSAILSQVWKDDLNSGHLLVSLFELFGESILSFIPSPE 527

Query: 1688 LSLF 1699
            +SLF
Sbjct: 528  MSLF 531


>ref|XP_003621904.1| Transcription initiation factor TFIID subunit [Medicago truncatula]
            gi|355496919|gb|AES78122.1| Transcription initiation
            factor TFIID subunit [Medicago truncatula]
          Length = 562

 Score =  695 bits (1794), Expect = 0.0
 Identities = 353/562 (62%), Positives = 429/562 (76%), Gaps = 19/562 (3%)
 Frame = +2

Query: 71   MSIVPKETVEVIAQTIGINNLTXXXXXXXXXXVEYRMREIMQEAIKCMRHSRRTTLTTDD 250
            MSIVPKET+EVIAQ+IGINNL+          VEYRMR+IMQEAIKCMRHS+RTTLT DD
Sbjct: 1    MSIVPKETIEVIAQSIGINNLSPDVALSVAPDVEYRMRQIMQEAIKCMRHSKRTTLTADD 60

Query: 251  IDSALKLRNVEPIYGFASGDPLRFRRALGHXXXXXXXXXXXXXXXXIEASLPKAPLDTSI 430
            +D+AL L+NVEPIYGFASG PLRF+RA+GH                IEA+LPKAPLDT++
Sbjct: 61   VDAALNLKNVEPIYGFASGGPLRFKRAVGHRDLFYIDDKDLDLKDVIEAALPKAPLDTAL 120

Query: 431  VCHWLAIEGVQPAIPENAPVEAITAPSETNKADKKDNELPVDIKLPVKHVLSRELQLYFN 610
             CHWLAIEGVQPAIPENAPV+ I+APS+  K ++KD+ LPVDIKLPVKHVLSRELQLYF+
Sbjct: 121  TCHWLAIEGVQPAIPENAPVDVISAPSDIKKHEQKDDNLPVDIKLPVKHVLSRELQLYFD 180

Query: 611  RITELTLSRSDMVLFKEAMASLATDSGLHPLVPYFTCFIADEVARGLTEFNVLFALMRVV 790
            ++TEL L+  D VLFKEA+ SLATDSGLHPLVPYFTCF+ADEV+RGL+ F +LFALMRVV
Sbjct: 181  KVTELALNEPDSVLFKEALVSLATDSGLHPLVPYFTCFVADEVSRGLSNFPLLFALMRVV 240

Query: 791  WSLLQNPHIHIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTANLVAFICRKFGHI 970
             SLLQNPHIHIEPYLHQLMPS+VTCLVAKRLG+RL DNHWELRDFTANLVA IC++FGH+
Sbjct: 241  NSLLQNPHIHIEPYLHQLMPSIVTCLVAKRLGSRLTDNHWELRDFTANLVASICKRFGHV 300

Query: 971  YNSLQTRLTKTLLNAFLDPKRAMTQHYGAVQGLAALGPNVVRLLILPNLEAYLKLLEPEM 1150
            Y++LQ+RL+KTLLNAF DPK+AMTQHYGA+QGL ALGPNVVRLL+LPNLEAY++LLEPEM
Sbjct: 301  YSNLQSRLSKTLLNAFSDPKKAMTQHYGAIQGLGALGPNVVRLLLLPNLEAYIRLLEPEM 360

Query: 1151 LFEKQNNELKRYEAWRVYGALLRAAGQSIYDKLKMFPPLPSPPAHGVWRKNARIITSYPT 1330
            L E Q NE+KR+EAWRVYGALLRAAGQ +Y  LK+FP  PSP  H VW+ +A ++TS P 
Sbjct: 361  LLETQKNEMKRHEAWRVYGALLRAAGQCVYVSLKLFPAFPSPLPHTVWKTSASVLTS-PP 419

Query: 1331 NKRTANSEDLEHQPPLKKVATDG--AIVPESNNTPPSEMQRVTRAPEXXXXXXXXXXXXX 1504
            NKR A+  +LE QPPLKKV TDG  ++V E+++    E + VT+A               
Sbjct: 420  NKRKASPMELEQQPPLKKVDTDGEVSVVQENSSASHKEEETVTQASSAELKIGAASSSGE 479

Query: 1505 QI--------------PNENDKNSKVGRERS---ESEAVRMKALLNQTWKDDLESGQVLG 1633
                              +++K +  G  RS   +++ +++ ++L   WKD+L SG+VL 
Sbjct: 480  TKNKITTDGVVRSSGGDTQDNKITTDGVVRSSGGDTQDLKISSVLAHIWKDELNSGRVLT 539

Query: 1634 KLFELFGERIFPFVPTPELSLF 1699
             L ELFGE I  F+   E+ +F
Sbjct: 540  SLVELFGENILSFIQNREMCMF 561