BLASTX nr result

ID: Bupleurum21_contig00005499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005499
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33174.3| unnamed protein product [Vitis vinifera]              190   3e-46
ref|XP_002282289.1| PREDICTED: 60S ribosomal protein L35-like [V...   189   5e-46
gb|AFK34682.1| unknown [Lotus japonicus] gi|388505778|gb|AFK4095...   188   1e-45
gb|AFK40432.1| unknown [Lotus japonicus]                              186   6e-45
gb|AEC10955.1| ribosomal protein L35 [Camellia sinensis]              185   7e-45

>emb|CBI33174.3| unnamed protein product [Vitis vinifera]
          Length = 174

 Score =  190 bits (482), Expect = 3e-46
 Identities = 101/125 (80%), Positives = 105/125 (84%)
 Frame = -1

Query: 627 SSMARIKVHELRTKTKGDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVL 448
           ++MARIKVHELR KTK D              LRVAKVTGGAPNKLSKIKVVRLSIAQVL
Sbjct: 50  AAMARIKVHELRGKTKADLLVQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVL 109

Query: 447 TVMQQKQKAALREVYKNKKYLPLDLRPKKTRAIRKRLTKHQASLKTEREKKKEKYFPMRK 268
           TV+ QKQKAALRE YKNKKYLPLDLRPKKTRAIRKRLTKHQ SLKTEREKK+E YFPMRK
Sbjct: 110 TVISQKQKAALREAYKNKKYLPLDLRPKKTRAIRKRLTKHQVSLKTEREKKREMYFPMRK 169

Query: 267 YAIKV 253
           YAIKV
Sbjct: 170 YAIKV 174


>ref|XP_002282289.1| PREDICTED: 60S ribosomal protein L35-like [Vitis vinifera]
          Length = 123

 Score =  189 bits (480), Expect = 5e-46
 Identities = 101/123 (82%), Positives = 103/123 (83%)
 Frame = -1

Query: 621 MARIKVHELRTKTKGDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 442
           MARIKVHELR KTK D              LRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRGKTKADLLVQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 441 MQQKQKAALREVYKNKKYLPLDLRPKKTRAIRKRLTKHQASLKTEREKKKEKYFPMRKYA 262
           + QKQKAALRE YKNKKYLPLDLRPKKTRAIRKRLTKHQ SLKTEREKK+E YFPMRKYA
Sbjct: 61  ISQKQKAALREAYKNKKYLPLDLRPKKTRAIRKRLTKHQVSLKTEREKKREMYFPMRKYA 120

Query: 261 IKV 253
           IKV
Sbjct: 121 IKV 123


>gb|AFK34682.1| unknown [Lotus japonicus] gi|388505778|gb|AFK40955.1| unknown
           [Lotus japonicus]
          Length = 123

 Score =  188 bits (477), Expect = 1e-45
 Identities = 100/123 (81%), Positives = 104/123 (84%)
 Frame = -1

Query: 621 MARIKVHELRTKTKGDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 442
           MARIKVHELR K K D              LRVAKVTGGAPNKLSKIKVVRL+IAQVLTV
Sbjct: 1   MARIKVHELRQKNKADLLSQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLNIAQVLTV 60

Query: 441 MQQKQKAALREVYKNKKYLPLDLRPKKTRAIRKRLTKHQASLKTEREKKKEKYFPMRKYA 262
           + QKQKAALREVYKNKKYLPLDLRPKKTRAIR+RLTKHQASLKTEREKKKE YFPMRK+A
Sbjct: 61  ISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKETYFPMRKFA 120

Query: 261 IKV 253
           IKV
Sbjct: 121 IKV 123


>gb|AFK40432.1| unknown [Lotus japonicus]
          Length = 123

 Score =  186 bits (471), Expect = 6e-45
 Identities = 98/123 (79%), Positives = 104/123 (84%)
 Frame = -1

Query: 621 MARIKVHELRTKTKGDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 442
           MARIKV+ELR KTK +              LRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVYELRNKTKAELLSQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 441 MQQKQKAALREVYKNKKYLPLDLRPKKTRAIRKRLTKHQASLKTEREKKKEKYFPMRKYA 262
           + QKQKAALRE YKNKKYLPLDLRPKKTRAIR+RLTKHQASLKTEREKKKE YFP+RKYA
Sbjct: 61  ISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYA 120

Query: 261 IKV 253
           +KV
Sbjct: 121 VKV 123


>gb|AEC10955.1| ribosomal protein L35 [Camellia sinensis]
          Length = 123

 Score =  185 bits (470), Expect = 7e-45
 Identities = 97/123 (78%), Positives = 102/123 (82%)
 Frame = -1

Query: 621 MARIKVHELRTKTKGDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 442
           MARIKVHELR K+K +               RVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKAELQSQLKDFKAELSLFRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 441 MQQKQKAALREVYKNKKYLPLDLRPKKTRAIRKRLTKHQASLKTEREKKKEKYFPMRKYA 262
           + QKQK+ LRE YKNKKYLPLDLRPKKTRAIR+RLTKHQASLKTEREKKKE YFPMRKYA
Sbjct: 61  ISQKQKSVLREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPMRKYA 120

Query: 261 IKV 253
           IKV
Sbjct: 121 IKV 123


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