BLASTX nr result
ID: Bupleurum21_contig00005495
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00005495
(2552 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI19970.3| unnamed protein product [Vitis vinifera] 179 3e-42
ref|XP_002278177.1| PREDICTED: uncharacterized protein LOC100267... 172 3e-40
emb|CAN61511.1| hypothetical protein VITISV_013331 [Vitis vinifera] 172 3e-40
ref|XP_002307020.1| predicted protein [Populus trichocarpa] gi|2... 82 7e-13
ref|XP_003630250.1| Zinc finger CCCH domain-containing protein [... 80 4e-12
>emb|CBI19970.3| unnamed protein product [Vitis vinifera]
Length = 994
Score = 179 bits (454), Expect = 3e-42
Identities = 146/460 (31%), Positives = 192/460 (41%), Gaps = 61/460 (13%)
Frame = -1
Query: 2303 KHPSIFVQGYTMSG--RKRKSLWDSKESEIPPEFSKHDARHGQGNHSSHRPKWSELEANN 2130
K SI ++ +TMSG RKRKS WD KE + S ++ + G N WS+LEAN+
Sbjct: 115 KKSSISLREFTMSGSVRKRKSKWDLKEESQFAKISSNNVKAGDSNLDD----WSDLEAND 170
Query: 2129 SLKXXXXXXXXXXXXXQDNDG-------RRDPNDIPETRRA--VGVAYSYSRSPGFNGRG 1977
LK N G R+ N++ ET R +YS SP F+GR
Sbjct: 171 GLKSNDNFELDSWEPLSGNGGAQKDVRDNREFNEVSETMRGWVADNSYSMRTSPSFDGRV 230
Query: 1976 RQNHSPPSDVYWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVTRSWSXXX 1797
++ + W +RSWS
Sbjct: 231 QKRYGRSPRNNWRQSNRGRSRSRSRSRGRSKTLGRSVSS-------------SRSWSRSR 277
Query: 1796 XXXXXXXXDTNWSRSSLYDHRRE-YNEMDDRKSESRVSSQICRDFAVGMCRRGDQCRFLH 1620
+ SRS D +R+ Y + ++ S VSSQ CRDF G C RG QCRFLH
Sbjct: 278 SRSRSR----SLSRSPHVDFKRDSYGFSERSRNGSGVSSQRCRDFVAGRCSRGSQCRFLH 333
Query: 1619 QDNLNPRDGGRPERERAERWSGRQETSEAFS-ADIERPRHHPIDKVS------------- 1482
QDNLN RDGGR E ++AE W RQE A AD E P +P DKV+
Sbjct: 334 QDNLNYRDGGRSEIDQAESWESRQEHRRASRYADAEGPIDYPRDKVARGGYGNQYDGEKD 393
Query: 1481 ----NYDRSN-RSSSF----------------------------DHDHRRHPHKNNNIPC 1401
N RSN R + F DH+ +R PH+ I C
Sbjct: 394 VPVRNNSRSNVRCNDFLKGKCHRGSSCKFSHHGASGDRYDRHDRDHERKREPHRVGGILC 453
Query: 1400 RYFAMGRCHRDD-CRFSHDHHGGGGEKERLQYDRYTLHTDDENKYRSGAKRGNANGVSDI 1224
+YFAMG+C D CRFSHD + R + ++ + DDENK K A +
Sbjct: 454 KYFAMGKCFNGDRCRFSHDDPPCDSPEGRPRDGKWGHNLDDENKPWEDTKWNGAAALDIA 513
Query: 1223 NINEWSASDAGNTNYTD-RTAKKHAYSRQDQDLKDENISW 1107
+EW ++D GN N+TD A K + Q L +EN W
Sbjct: 514 KSSEWGSNDNGNKNFTDSMVADKSIGNSWGQSLDNENKPW 553
Score = 103 bits (257), Expect = 2e-19
Identities = 72/207 (34%), Positives = 115/207 (55%), Gaps = 6/207 (2%)
Frame = -2
Query: 742 GSHFQTVNGTPLQTYEK-VIEGTSSQQLSNNLDHPLVSDTSYVQQNDMKRGNNDMPTDNF 566
GS QT+NG +E+ +++ TSS QL+ + P VS SYVQQ+ K G+N D
Sbjct: 605 GSQAQTLNGISRPAHEQNIMQDTSSLQLATSFMRPTVSGDSYVQQHLGKSGDNTAMVDG- 663
Query: 565 NAMNGVSISGNTIQLLVPDQSFNQNSGMLGS---MQFHDTDQRNAII-VTPSKGHEIDLN 398
++ + V+ S +T+ VP QSFN++ LGS + F++T Q + + P GH IDLN
Sbjct: 664 SSHDRVNFSVHTLH--VPRQSFNKDGDNLGSQPPLSFNETSQSQHMCNLNPLNGHTIDLN 721
Query: 397 RSDEQLFYQHQQEESKILCE-ESINNKQVFKSEVPQVDPGLLQNDMTSYQVATITNLSAS 221
E++ + C+ ES+ ++ + +VPQV G +N +T+ V +++LS S
Sbjct: 722 GPVERINSPLNLQSQTQFCQGESVETPEMMECKVPQVISGTPRNFITNNPVGQMSSLSES 781
Query: 220 LNEILSNGKQLPELYTALNAKNSNHLL 140
L ++ NG+QL + Y LN NS L+
Sbjct: 782 LAQVFGNGQQLLQPYAVLNTPNSMDLV 808
>ref|XP_002278177.1| PREDICTED: uncharacterized protein LOC100267803 [Vitis vinifera]
Length = 913
Score = 172 bits (437), Expect = 3e-40
Identities = 142/449 (31%), Positives = 185/449 (41%), Gaps = 61/449 (13%)
Frame = -1
Query: 2270 MSG--RKRKSLWDSKESEIPPEFSKHDARHGQGNHSSHRPKWSELEANNSLKXXXXXXXX 2097
MSG RKRKS WD KE + S ++ + G N WS+LEAN+ LK
Sbjct: 1 MSGSVRKRKSKWDLKEESQFAKISSNNVKAGDSNLDD----WSDLEANDGLKSNDNFELD 56
Query: 2096 XXXXXQDNDG-------RRDPNDIPETRRA--VGVAYSYSRSPGFNGRGRQNHSPPSDVY 1944
N G R+ N++ ET R +YS SP F+GR ++ +
Sbjct: 57 SWEPLSGNGGAQKDVRDNREFNEVSETMRGWVADNSYSMRTSPSFDGRVQKRYGRSPRNN 116
Query: 1943 WXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVTRSWSXXXXXXXXXXXDTN 1764
W +RSWS +
Sbjct: 117 WRQSNRGRSRSRSRSRGRSKTLGRSVSS-------------SRSWSRSRSRSRSR----S 159
Query: 1763 WSRSSLYDHRRE-YNEMDDRKSESRVSSQICRDFAVGMCRRGDQCRFLHQDNLNPRDGGR 1587
SRS D +R+ Y + ++ S VSSQ CRDF G C RG QCRFLHQDNLN RDGGR
Sbjct: 160 LSRSPHVDFKRDSYGFSERSRNGSGVSSQRCRDFVAGRCSRGSQCRFLHQDNLNYRDGGR 219
Query: 1586 PERERAERWSGRQETSEAFS-ADIERPRHHPIDKVS-----------------NYDRSN- 1464
E ++AE W RQE A AD E P +P DKV+ N RSN
Sbjct: 220 SEIDQAESWESRQEHRRASRYADAEGPIDYPRDKVARGGYGNQYDGEKDVPVRNNSRSNV 279
Query: 1463 RSSSF----------------------------DHDHRRHPHKNNNIPCRYFAMGRCHRD 1368
R + F DH+ +R PH+ I C+YFAMG+C
Sbjct: 280 RCNDFLKGKCHRGSSCKFSHHGASGDRYDRHDRDHERKREPHRVGGILCKYFAMGKCFNG 339
Query: 1367 D-CRFSHDHHGGGGEKERLQYDRYTLHTDDENKYRSGAKRGNANGVSDININEWSASDAG 1191
D CRFSHD + R + ++ + DDENK K A + +EW ++D G
Sbjct: 340 DRCRFSHDDPPCDSPEGRPRDGKWGHNLDDENKPWEDTKWNGAAALDIAKSSEWGSNDNG 399
Query: 1190 NTNYTD-RTAKKHAYSRQDQDLKDENISW 1107
N N+TD A K + Q L +EN W
Sbjct: 400 NKNFTDSMVADKSIGNSWGQSLDNENKPW 428
Score = 119 bits (299), Expect = 3e-24
Identities = 86/252 (34%), Positives = 136/252 (53%), Gaps = 6/252 (2%)
Frame = -2
Query: 742 GSHFQTVNGTPLQTYEK-VIEGTSSQQLSNNLDHPLVSDTSYVQQNDMKRGNNDMPTDNF 566
GS QT+NG +E+ +++ TSS QL+ + P VS SYVQQ+ K G+N D
Sbjct: 480 GSQAQTLNGISRPAHEQNIMQDTSSLQLATSFMRPTVSGDSYVQQHLGKSGDNTAMVDG- 538
Query: 565 NAMNGVSISGNTIQLLVPDQSFNQNSGMLGS---MQFHDTDQRNAII-VTPSKGHEIDLN 398
++ + V+ S +T+ VP QSFN++ LGS + F++T Q + + P GH IDLN
Sbjct: 539 SSHDRVNFSVHTLH--VPRQSFNKDGDNLGSQPPLSFNETSQSQHMCNLNPLNGHTIDLN 596
Query: 397 RSDEQLFYQHQQEESKILCE-ESINNKQVFKSEVPQVDPGLLQNDMTSYQVATITNLSAS 221
E++ + C+ ES+ ++ + +VPQV G +N +T+ V +++LS S
Sbjct: 597 GPVERINSPLNLQSQTQFCQGESVETPEMMECKVPQVISGTPRNFITNNPVGQMSSLSES 656
Query: 220 LNEILSNGKQLPELYTALNAKNSNHLLTSLSCSASVNSPVALTVGQPNPTTLFQEKQVPI 41
L ++ NG+QL + Y LN NS L++S S +A + + QPN T FQE+
Sbjct: 657 LAQVFGNGQQLLQPYAVLNTPNSMDLVSSHSNTAGLVPSITSMTVQPNAATCFQEQYQ-- 714
Query: 40 GDIIEPCKHDQS 5
+ +EP K S
Sbjct: 715 AESLEPSKPGSS 726
>emb|CAN61511.1| hypothetical protein VITISV_013331 [Vitis vinifera]
Length = 913
Score = 172 bits (437), Expect = 3e-40
Identities = 142/449 (31%), Positives = 185/449 (41%), Gaps = 61/449 (13%)
Frame = -1
Query: 2270 MSG--RKRKSLWDSKESEIPPEFSKHDARHGQGNHSSHRPKWSELEANNSLKXXXXXXXX 2097
MSG RKRKS WD KE + S ++ + G N WS+LEAN+ LK
Sbjct: 1 MSGSVRKRKSKWDLKEESQFAKISSNNVKAGDSNLDD----WSDLEANDGLKSNDNFELD 56
Query: 2096 XXXXXQDNDG-------RRDPNDIPETRRA--VGVAYSYSRSPGFNGRGRQNHSPPSDVY 1944
N G R+ N++ ET R +YS SP F+GR ++ +
Sbjct: 57 SWEPLSGNGGAQKDVRDNREFNEVSETMRGWVADNSYSMRTSPSFDGRVQKRYGRSPRNN 116
Query: 1943 WXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVTRSWSXXXXXXXXXXXDTN 1764
W +RSWS +
Sbjct: 117 WRQSNRGRSRSRSRSRGRSKTLGRSVSS-------------SRSWSRSRSRSRSR----S 159
Query: 1763 WSRSSLYDHRRE-YNEMDDRKSESRVSSQICRDFAVGMCRRGDQCRFLHQDNLNPRDGGR 1587
SRS D +R+ Y + ++ S VSSQ CRDF G C RG QCRFLHQDNLN RDGGR
Sbjct: 160 LSRSPHVDFKRDSYGFSERSRNGSGVSSQRCRDFVAGRCSRGSQCRFLHQDNLNYRDGGR 219
Query: 1586 PERERAERWSGRQETSEAFS-ADIERPRHHPIDKVS-----------------NYDRSN- 1464
E ++AE W RQE A AD E P +P DKV+ N RSN
Sbjct: 220 SEIDQAESWESRQEHRRASRYADAEGPIDYPRDKVARGGYGNQYDGEKDVPVRNNSRSNV 279
Query: 1463 RSSSF----------------------------DHDHRRHPHKNNNIPCRYFAMGRCHRD 1368
R + F DH+ +R PH+ I C+YFAMG+C
Sbjct: 280 RCNDFLKGKCHRGSSCKFSHHGASGDRYDRHDRDHERKREPHRVGGILCKYFAMGKCFNG 339
Query: 1367 D-CRFSHDHHGGGGEKERLQYDRYTLHTDDENKYRSGAKRGNANGVSDININEWSASDAG 1191
D CRFSHD + R + ++ + DDENK K A + +EW ++D G
Sbjct: 340 DRCRFSHDDPPCDSPEGRPRDGKWGHNLDDENKPWEDTKWNGAAALDIAKSSEWGSNDNG 399
Query: 1190 NTNYTD-RTAKKHAYSRQDQDLKDENISW 1107
N N+TD A K + Q L +EN W
Sbjct: 400 NKNFTDSMVADKSIGNSWGQSLDNENKPW 428
Score = 119 bits (297), Expect = 5e-24
Identities = 85/252 (33%), Positives = 136/252 (53%), Gaps = 6/252 (2%)
Frame = -2
Query: 742 GSHFQTVNGTPLQTYEK-VIEGTSSQQLSNNLDHPLVSDTSYVQQNDMKRGNNDMPTDNF 566
GS QT+NG +E+ +++ TSS QL+ + P VS SYVQQ+ K G+N D
Sbjct: 480 GSQAQTLNGISRPAHEQNIMQDTSSLQLATSFMRPTVSGDSYVQQHLGKSGDNTAMVDG- 538
Query: 565 NAMNGVSISGNTIQLLVPDQSFNQNSGMLGS---MQFHDTDQRNAII-VTPSKGHEIDLN 398
++ + V+ S +T+ VP QSFN++ LGS + F++T Q + + P GH IDLN
Sbjct: 539 SSHDRVNFSVHTLH--VPRQSFNKDGDNLGSQPPLSFNETSQSQHMCNLNPLNGHTIDLN 596
Query: 397 RSDEQLFYQHQQEESKILCE-ESINNKQVFKSEVPQVDPGLLQNDMTSYQVATITNLSAS 221
+++ + C+ ES+ ++ + +VPQV G +N +T+ V +++LS S
Sbjct: 597 GPVZRINSPLNLQSQTQXCQGESVETPEMMECKVPQVISGTPRNFITNNPVGQMSSLSES 656
Query: 220 LNEILSNGKQLPELYTALNAKNSNHLLTSLSCSASVNSPVALTVGQPNPTTLFQEKQVPI 41
L ++ NG+QL + Y LN NS L++S S +A + + QPN T FQE+
Sbjct: 657 LAQVFGNGQQLLQPYAVLNTPNSMDLVSSHSNTAGLVPSITSMTVQPNAATCFQEQYQ-- 714
Query: 40 GDIIEPCKHDQS 5
+ +EP K S
Sbjct: 715 AESLEPSKPGSS 726
>ref|XP_002307020.1| predicted protein [Populus trichocarpa] gi|222856469|gb|EEE94016.1|
predicted protein [Populus trichocarpa]
Length = 858
Score = 82.0 bits (201), Expect = 7e-13
Identities = 66/242 (27%), Positives = 95/242 (39%), Gaps = 18/242 (7%)
Frame = -1
Query: 1760 SRSSLYDHRREYNEMDDRKSESRVSSQICRDFAVGMCRRGDQCRFLHQDNLNPRDGGRPE 1581
SRS +Y RE D +S S VS+Q+C+DF G CRRG C+FLHQD
Sbjct: 137 SRSPVYGFGRESGAYDRTRSRSGVSAQLCKDFVAGRCRRGSHCQFLHQD----------- 185
Query: 1580 RERAERWSGRQETSEAFSADIERPRHHPIDKVSNYDRSNRSSSFDHDHRRHPHKNNNIP- 1404
+E + D ERPR K HD +++P +
Sbjct: 186 -------------TETYEDDWERPRKTAASKYP----------ISHDTKQYPMGSGRSAN 222
Query: 1403 -CRYFAMGRCHR-DDCRFSHDHHGGGGEKERLQYDRYTLHTDDENKYRSGAKRGNA---- 1242
C F G C R + CR++H HG R + D++ + R + A
Sbjct: 223 CCTNFLKGNCRRGESCRYAH--HGASDPSSRGSANEVIRERDNDRRRRYASPERRAERET 280
Query: 1241 NGVSDININEWSASDAGNTNYT-----DRTAKKHAYSRQD------QDLKDENISWNGPK 1095
+ +DI ++A + N Y D+T +D Q+ + SW GPK
Sbjct: 281 SRAADIPCKFFAAGNCQNGKYCRFSHHDQTLASPDKRSRDVRWPPSQNSDELEKSWKGPK 340
Query: 1094 WS 1089
WS
Sbjct: 341 WS 342
Score = 61.2 bits (147), Expect = 1e-06
Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 25/325 (7%)
Frame = -2
Query: 916 LNLPEPPISEMKTDERYGNSMDHMMQNRSQNVSDVANVDTFEP-------TGVTTFDRDA 758
L+ P +S ++ +G++ D + ++V +D E +G T +
Sbjct: 360 LDAPNLRLSARHMEDGWGHNPDEDKTASNPPTNEVVEIDKKEAFQWKTENSGDNTNVSEN 419
Query: 757 WV------PAKGSHFQTVNGTPLQTYEKVIEGTSSQQLSNNLDHPLVSDTSYVQQ--NDM 602
W+ P Q N + ++ EG+ + + P+ ++TS +QQ N
Sbjct: 420 WLGDMEMSPDWNYRLQPSNHINEGSCHELQEGSGRMHDTAAVMPPISNETSSIQQGFNLK 479
Query: 601 KRGNNDMPTDNFN-----AMNGVSISGNTIQLLVPDQSFNQN---SGMLGSMQFHDTDQR 446
+ G + +P D+ A + ++IS N + QSFN+N S + + Q
Sbjct: 480 EVGGSALPHDDDGVTAKTASSYINISANALA----SQSFNKNGQSSNTSPILNLNTVGQI 535
Query: 445 NAIIVTPSKGHEIDLNRSDEQLFYQHQQEESKILCEESINNKQVFKSEVPQVDPGL--LQ 272
I+T + N ++ LF QE + I ++ N P + G+ Q
Sbjct: 536 QEAILTNASRGGTTTNPQNQTLF----QERAVINIPDTGN------PNAPHANLGIPTAQ 585
Query: 271 NDMTSYQVATITNLSASLNEILSNGKQLPELYTALNAKNSNHLLTSLSCSASVNSPVALT 92
N ++ + +TNLSA+L ++L NG+QLP+LY A N+ + + + + +S V +
Sbjct: 586 NMASNEHLTQLTNLSATLVQLLVNGQQLPQLYEAHNSHDGTFANSEGTVTVKPDSAVTI- 644
Query: 91 VGQPNPTTLFQEKQVPIGDIIEPCK 17
QPN +++ PI D +EP K
Sbjct: 645 --QPNQAVEPRKQYDPICDSVEPGK 667
>ref|XP_003630250.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355524272|gb|AET04726.1| Zinc finger CCCH
domain-containing protein [Medicago truncatula]
Length = 779
Score = 79.7 bits (195), Expect = 4e-12
Identities = 57/174 (32%), Positives = 79/174 (45%), Gaps = 36/174 (20%)
Frame = -1
Query: 1760 SRSSLYDHRREYNEMDDR-KSESRVSSQICRDFAVGMCRRGDQCRFLHQDNLNPRDGGRP 1584
SRS H ++ +DDR ++ S+Q CRDFAVG CRRG C FLH D + D R
Sbjct: 110 SRSRSPPHGFSHSSVDDRNRTRDGRSAQPCRDFAVGNCRRGSHCHFLHHDKQSYED-SRE 168
Query: 1583 ERERAE--RWSGRQETSEAFSADIERPR--------------------HHP----IDKV- 1485
R R + R+S +E + +S R HH DK+
Sbjct: 169 SRHRPDGRRYSNPRENGD-YSLTNRRSNEACIYFAKGRCRMGESCKYVHHDNSDGFDKIL 227
Query: 1484 -------SNYDRSNRSSSFDHDHRRHPHKNNNIPCRYFAMGRCHR-DDCRFSHD 1347
DR + SF + +P+ ++N PC++FA+G C DCRFSHD
Sbjct: 228 ADESSSEREIDRRHIEQSFKQGDQHYPNHSSNTPCKFFALGNCRNGKDCRFSHD 281