BLASTX nr result

ID: Bupleurum21_contig00005484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005484
         (807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273061.1| PREDICTED: uncharacterized protein LOC100249...    99   2e-28
ref|XP_003630517.1| AT-hook motif nuclear localized protein [Med...    91   3e-20
emb|CBI34677.3| unnamed protein product [Vitis vinifera]               96   9e-18
ref|XP_002304491.1| predicted protein [Populus trichocarpa] gi|2...    95   2e-17
ref|XP_004159952.1| PREDICTED: uncharacterized protein LOC101224...    92   2e-16

>ref|XP_002273061.1| PREDICTED: uncharacterized protein LOC100249560 [Vitis vinifera]
          Length = 346

 Score = 99.4 bits (246), Expect(2) = 2e-28
 Identities = 51/126 (40%), Positives = 70/126 (55%)
 Frame = -3

Query: 379 GSAYQADHPSLNFGHDANMGVPSSLSLSDXXXXXXXXXXXXXXXGANMXXXXXXXXXXXX 200
           G  +  DH   NF H  NM VPS +  ++                 N+            
Sbjct: 63  GQTFSVDHSQTNFPHGFNMAVPSGVPPAEPVKRKRGRPRKYGPD-GNVSLGLSPMSARPS 121

Query: 199 XXXLMLAEKERKNRGRPRGSGRKQRLASLGEWMNSSAGMAFTPHIIHIAQGEDIASKILA 20
                +   +++ RGRP G+GRKQ+LA+LGEWMNSSAG+AF PH+I +A GEDIA++IL+
Sbjct: 122 LGSGSVTPTQKRGRGRPPGTGRKQQLATLGEWMNSSAGLAFAPHVISMAVGEDIATRILS 181

Query: 19  FAQQRP 2
           F+QQRP
Sbjct: 182 FSQQRP 187



 Score = 53.1 bits (126), Expect(2) = 2e-28
 Identities = 31/58 (53%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
 Frame = -2

Query: 632 MDGREGMGLSGSPPYY-YRGVSGSCPSPGSIYESGTQAVLPTPTGFKNLSSPNLSGQA 462
           MDGRE M LSGSPPYY +RGV GS    GS   SG    L  P GF+ LS+P +  Q+
Sbjct: 1   MDGREAMALSGSPPYYIHRGVVGSASLSGSGIHSGG---LHAPPGFRPLSNPGIPVQS 55


>ref|XP_003630517.1| AT-hook motif nuclear localized protein [Medicago truncatula]
           gi|355524539|gb|AET04993.1| AT-hook motif nuclear
           localized protein [Medicago truncatula]
          Length = 351

 Score = 91.3 bits (225), Expect(2) = 3e-20
 Identities = 49/122 (40%), Positives = 65/122 (53%)
 Frame = -3

Query: 367 QADHPSLNFGHDANMGVPSSLSLSDXXXXXXXXXXXXXXXGANMXXXXXXXXXXXXXXXL 188
           Q+ +   NF H  N+G  S    SD               G+                  
Sbjct: 70  QSHNSHANFNHGINIGASSGAPSSDPVKKKRGRPRKYGPDGSVSLKLSPTSAPAKSTQED 129

Query: 187 MLAEKERKNRGRPRGSGRKQRLASLGEWMNSSAGMAFTPHIIHIAQGEDIASKILAFAQQ 8
                E++ RGRPRGSGRKQ+LA+LG+WM SSAG+AF+PH+I I  GEDIA+K+L+ +QQ
Sbjct: 130 STTPSEKRGRGRPRGSGRKQQLAALGDWMTSSAGLAFSPHVITIGVGEDIAAKLLSLSQQ 189

Query: 7   RP 2
           RP
Sbjct: 190 RP 191



 Score = 33.5 bits (75), Expect(2) = 3e-20
 Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = -2

Query: 632 MDGREGMGLSGSPPYYY--RGVSGSCPSPGSIYESGTQAVLPTP-TGFKNLSSPNLSGQ 465
           MDGRE M  SG P  YY  RG +G   S    ++       P P TG   ++ PN  GQ
Sbjct: 1   MDGREAMAFSGGPGSYYMHRGGAGVAGSGSGGFQLPPPGFRPLPNTGI--IAQPNARGQ 57


>emb|CBI34677.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score = 95.9 bits (237), Expect = 9e-18
 Identities = 50/120 (41%), Positives = 68/120 (56%)
 Frame = -3

Query: 361 DHPSLNFGHDANMGVPSSLSLSDXXXXXXXXXXXXXXXGANMXXXXXXXXXXXXXXXLML 182
           DH   NF H  NM VPS +  ++                 N+                 +
Sbjct: 32  DHSQTNFPHGFNMAVPSGVPPAEPVKRKRGRPRKYGPD-GNVSLGLSPMSARPSLGSGSV 90

Query: 181 AEKERKNRGRPRGSGRKQRLASLGEWMNSSAGMAFTPHIIHIAQGEDIASKILAFAQQRP 2
              +++ RGRP G+GRKQ+LA+LGEWMNSSAG+AF PH+I +A GEDIA++IL+F+QQRP
Sbjct: 91  TPTQKRGRGRPPGTGRKQQLATLGEWMNSSAGLAFAPHVISMAVGEDIATRILSFSQQRP 150


>ref|XP_002304491.1| predicted protein [Populus trichocarpa] gi|222841923|gb|EEE79470.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 49/124 (39%), Positives = 68/124 (54%)
 Frame = -3

Query: 373 AYQADHPSLNFGHDANMGVPSSLSLSDXXXXXXXXXXXXXXXGANMXXXXXXXXXXXXXX 194
           A+  + P+ NFGH  NM   S + + +                  +              
Sbjct: 64  AFSIEPPNANFGHGINMAATSEVQVGEPVKKKRGRPRKYGLD-GQVSLGLSSFPDKAKPS 122

Query: 193 XLMLAEKERKNRGRPRGSGRKQRLASLGEWMNSSAGMAFTPHIIHIAQGEDIASKILAFA 14
               +   ++NRGRP GSGRKQ+LA+LGEWMNSSAG+AF+PH++ I  GEDI SK+L+F+
Sbjct: 123 SGEDSSTSKRNRGRPPGSGRKQQLATLGEWMNSSAGLAFSPHVVSIGVGEDIVSKLLSFS 182

Query: 13  QQRP 2
           QQRP
Sbjct: 183 QQRP 186


>ref|XP_004159952.1| PREDICTED: uncharacterized protein LOC101224467 [Cucumis sativus]
          Length = 343

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 39/56 (69%), Positives = 49/56 (87%)
 Frame = -3

Query: 169 RKNRGRPRGSGRKQRLASLGEWMNSSAGMAFTPHIIHIAQGEDIASKILAFAQQRP 2
           R+ RGRP GSGRKQ+LA LG+WMN+SAG+AF PH+IH+  GEDI +K+L+FAQQRP
Sbjct: 131 RRRRGRPPGSGRKQQLALLGDWMNNSAGLAFAPHVIHVGAGEDIVAKVLSFAQQRP 186