BLASTX nr result

ID: Bupleurum21_contig00005448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005448
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278441.2| PREDICTED: nuclear transcription factor Y su...   202   6e-50
emb|CBI27842.3| unnamed protein product [Vitis vinifera]              200   2e-49
ref|XP_002514074.1| Nuclear transcription factor Y subunit A-3, ...   193   4e-47
ref|XP_002308270.1| predicted protein [Populus trichocarpa] gi|2...   176   3e-42
ref|XP_003533780.1| PREDICTED: nuclear transcription factor Y su...   155   6e-36

>ref|XP_002278441.2| PREDICTED: nuclear transcription factor Y subunit A-3-like [Vitis
           vinifera]
          Length = 350

 Score =  202 bits (514), Expect = 6e-50
 Identities = 114/237 (48%), Positives = 145/237 (61%), Gaps = 5/237 (2%)
 Frame = -1

Query: 698 FGQVFTQPMPHIPFSTTPAWWNSQGQQFHRPLSKSLSLDMESPLKACEDGNH-GVETGHX 522
           F Q     MPH   +   AWWNS  QQ     SK+LSL +ESP +  ++    G++    
Sbjct: 13  FDQSSVHSMPHFTVNCQ-AWWNSNEQQLPESFSKNLSLKVESPPQLYQNMKQLGLQL--- 68

Query: 521 XXXXXXXXXXXXXXXXXQEVSAIEYNSPHDQYFSSDSAQGRSFIKHVEGQ--VKPVLVLS 348
                            QEVSAI   +  DQ  SS+S  G S  K VEGQ  +KPV  ++
Sbjct: 69  --QDQDSSSSQSTGQSHQEVSAIGRTNSQDQCISSESVHGESCEKRVEGQSQMKPVFFMA 126

Query: 347 NPSFGIDRSQADTNPSMAHIPYAYGDSFVNGLYAAYGPQ--VTPQVMGVPPIRVPLPIEL 174
           NP    + SQ D   S+ H+ Y Y D +  GL AAYGP   + PQ++G+ P RVPLP ++
Sbjct: 127 NPDVVFNPSQVDYGHSVTHVAYPYADPYHGGLVAAYGPHAVIQPQLVGIAPTRVPLPFDI 186

Query: 173 PDDGPIYVNAKQYNGIMRRRQMRAKLEAQNKLLKSRKPYLHESRHRHAVNRVRGSGG 3
            +DGPI+VNAKQY+GI+RRRQ RAK+EAQNKL+K+RKPYLHESRH HA+NRVRGSGG
Sbjct: 187 AEDGPIFVNAKQYHGILRRRQSRAKMEAQNKLVKARKPYLHESRHLHALNRVRGSGG 243


>emb|CBI27842.3| unnamed protein product [Vitis vinifera]
          Length = 310

 Score =  200 bits (509), Expect = 2e-49
 Identities = 112/229 (48%), Positives = 143/229 (62%), Gaps = 5/229 (2%)
 Frame = -1

Query: 674 MPHIPFSTTPAWWNSQGQQFHRPLSKSLSLDMESPLKACEDGNH-GVETGHXXXXXXXXX 498
           MPH   +   AWWNS  QQ     SK+LSL +ESP +  ++    G++            
Sbjct: 1   MPHFTVNCQ-AWWNSNEQQLPESFSKNLSLKVESPPQLYQNMKQLGLQL-----QDQDSS 54

Query: 497 XXXXXXXXXQEVSAIEYNSPHDQYFSSDSAQGRSFIKHVEGQ--VKPVLVLSNPSFGIDR 324
                    QEVSAI   +  DQ  SS+S  G S  K VEGQ  +KPV  ++NP    + 
Sbjct: 55  SSQSTGQSHQEVSAIGRTNSQDQCISSESVHGESCEKRVEGQSQMKPVFFMANPDVVFNP 114

Query: 323 SQADTNPSMAHIPYAYGDSFVNGLYAAYGPQ--VTPQVMGVPPIRVPLPIELPDDGPIYV 150
           SQ D   S+ H+ Y Y D +  GL AAYGP   + PQ++G+ P RVPLP ++ +DGPI+V
Sbjct: 115 SQVDYGHSVTHVAYPYADPYHGGLVAAYGPHAVIQPQLVGIAPTRVPLPFDIAEDGPIFV 174

Query: 149 NAKQYNGIMRRRQMRAKLEAQNKLLKSRKPYLHESRHRHAVNRVRGSGG 3
           NAKQY+GI+RRRQ RAK+EAQNKL+K+RKPYLHESRH HA+NRVRGSGG
Sbjct: 175 NAKQYHGILRRRQSRAKMEAQNKLVKARKPYLHESRHLHALNRVRGSGG 223


>ref|XP_002514074.1| Nuclear transcription factor Y subunit A-3, putative [Ricinus
           communis] gi|223546530|gb|EEF48028.1| Nuclear
           transcription factor Y subunit A-3, putative [Ricinus
           communis]
          Length = 327

 Score =  193 bits (490), Expect = 4e-47
 Identities = 110/235 (46%), Positives = 143/235 (60%), Gaps = 3/235 (1%)
 Frame = -1

Query: 698 FGQVFTQPMPHIPFSTTPAWWNSQGQQFHRPLSKSLSLDMESPLKACEDGNH-GVETGHX 522
           +GQV      H  FS  P+WWNS  QQ  R LSK++S  +ES  +   +  H G++    
Sbjct: 13  YGQV------HFTFSC-PSWWNSNEQQSPRFLSKNISFKVESTPQLNREAKHLGLQ---- 61

Query: 521 XXXXXXXXXXXXXXXXXQEVSAIEYNSPHDQYFSSDSAQGRSFIKHVEGQVKPVLVLSNP 342
                             EV A+   S  DQ  SS+S +  S  K+ EG++KPVL+ S P
Sbjct: 62  -HLDQDSSSAQSVGQSHNEVGAVGGTSSEDQCISSESGEDESCGKNAEGRMKPVLLFSAP 120

Query: 341 SFGIDRSQADTNPSMAHIPYAYGDSFVNGLYAAYGPQ--VTPQVMGVPPIRVPLPIELPD 168
               + SQ D + SMAH P  Y D +   L+  YGP+  +  Q++G+   RV LP++L D
Sbjct: 121 EISRNPSQTDNSRSMAHAPVPYADHYFGELFTPYGPKDIMGSQILGMTAARVALPLDLAD 180

Query: 167 DGPIYVNAKQYNGIMRRRQMRAKLEAQNKLLKSRKPYLHESRHRHAVNRVRGSGG 3
           DGPIYVNAKQY+GI+RRRQ RAKLEA+NKL+K+RKPYLHESRH HA+NRVRGSGG
Sbjct: 181 DGPIYVNAKQYHGILRRRQSRAKLEARNKLVKARKPYLHESRHLHALNRVRGSGG 235


>ref|XP_002308270.1| predicted protein [Populus trichocarpa] gi|222854246|gb|EEE91793.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  176 bits (447), Expect = 3e-42
 Identities = 105/229 (45%), Positives = 137/229 (59%), Gaps = 6/229 (2%)
 Frame = -1

Query: 671 PHIPFSTTPAWWNSQGQQFHRPLSKSLSLDMESPLKACEDGNHGVETGHXXXXXXXXXXX 492
           PH   S  P+WWNS  Q F   LSK+++  ++S  +      H  +              
Sbjct: 16  PHFTVSC-PSWWNSNEQHFSPSLSKNINFKVDSSPQPY----HEAKQLGLNLPDQESSST 70

Query: 491 XXXXXXXQEVSAIEYNSPHDQYFSSDSAQGRSFIKHVEGQVKPVLVLSNPSFGIDRSQAD 312
                   E+SA+   +   Q  SS+S +  S  K VEG+++PVL+LS P    + SQAD
Sbjct: 71  LSIGQSHNEMSAMGGTNSQGQCISSESDE--SCGKGVEGKMRPVLLLSTPDGVSNHSQAD 128

Query: 311 TNPSMAHIPYAYGDSFVNGLYAAYGPQ--VTPQV----MGVPPIRVPLPIELPDDGPIYV 150
            + SM   PY   D +  GL+  YGP   + PQ+    +G+   RVPLP++L DDGPIYV
Sbjct: 129 CSYSMVRTPYPCADPYFGGLFNPYGPHAFIQPQMGSHMVGMTAGRVPLPLDLADDGPIYV 188

Query: 149 NAKQYNGIMRRRQMRAKLEAQNKLLKSRKPYLHESRHRHAVNRVRGSGG 3
           NAKQY+GI+RRRQ RAKLEAQNKL+K+RKPYLHESRH HA+NRVRGSGG
Sbjct: 189 NAKQYHGILRRRQSRAKLEAQNKLVKNRKPYLHESRHIHALNRVRGSGG 237


>ref|XP_003533780.1| PREDICTED: nuclear transcription factor Y subunit A-3-like [Glycine
           max]
          Length = 228

 Score =  155 bits (393), Expect = 6e-36
 Identities = 78/124 (62%), Positives = 94/124 (75%), Gaps = 1/124 (0%)
 Frame = -1

Query: 371 VKPVLVLSNPSFGIDRSQADTNPSMAHIPYAYGDS-FVNGLYAAYGPQVTPQVMGVPPIR 195
           +KP L L+ P+   + SQ D N SMAH  Y YGD  F  G  A   PQ+ P ++G+   R
Sbjct: 1   MKPFLFLNLPNTEFNSSQVDCNHSMAHSSYPYGDPIFAYGPQAISHPQMIPPMLGLASTR 60

Query: 194 VPLPIELPDDGPIYVNAKQYNGIMRRRQMRAKLEAQNKLLKSRKPYLHESRHRHAVNRVR 15
           V LP++L +DGPIYVNAKQY+GI+RRRQ RAKLEAQNKL+K+RKPYLHESRHRHA+NRVR
Sbjct: 61  VALPLDLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKLIKNRKPYLHESRHRHALNRVR 120

Query: 14  GSGG 3
           GSGG
Sbjct: 121 GSGG 124


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