BLASTX nr result

ID: Bupleurum21_contig00005440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005440
         (1029 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509719.1| conserved hypothetical protein [Ricinus comm...    65   1e-13
ref|XP_002872612.1| predicted protein [Arabidopsis lyrata subsp....    59   9e-09
ref|XP_002872619.1| predicted protein [Arabidopsis lyrata subsp....    59   9e-09
ref|NP_192909.2| protein hapless 2 [Arabidopsis thaliana] gi|385...    59   9e-09
gb|AAY51998.1| HAP2 [Arabidopsis thaliana] gi|66731631|gb|AAY519...    59   9e-09

>ref|XP_002509719.1| conserved hypothetical protein [Ricinus communis]
           gi|223549618|gb|EEF51106.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 661

 Score = 64.7 bits (156), Expect(3) = 1e-13
 Identities = 37/51 (72%), Positives = 43/51 (84%), Gaps = 2/51 (3%)
 Frame = +3

Query: 477 SGRESSIVAELVEVEADENSSTSNMRTLRSPPAITVNKSA--ASYELTYIR 623
           SG E+SIVAE+VEVE  ENS+++NM+TLR PP ITVNKSA  A YELTYIR
Sbjct: 65  SGGEASIVAEIVEVE--ENSTSNNMQTLRIPPVITVNKSATYALYELTYIR 113



 Score = 30.4 bits (67), Expect(3) = 1e-13
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +2

Query: 275 ISGAQILSKSKLQKCENVS 331
           ++G +ILSKSKL+KCE  S
Sbjct: 23  VNGVEILSKSKLEKCEKAS 41



 Score = 27.3 bits (59), Expect(3) = 1e-13
 Identities = 10/15 (66%), Positives = 15/15 (100%)
 Frame = +1

Query: 346 LDCTSKIVINLAVPN 390
           L+CT+KIV+N+AVP+
Sbjct: 48  LNCTAKIVLNMAVPS 62


>ref|XP_002872612.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318449|gb|EFH48871.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 710

 Score = 59.3 bits (142), Expect(2) = 9e-09
 Identities = 34/51 (66%), Positives = 42/51 (82%), Gaps = 2/51 (3%)
 Frame = +3

Query: 477 SGRESSIVAELVEVEADENSSTSNMRTLRSPPAITVNKSA--ASYELTYIR 623
           SG E+SIVAE+VEVE   ++S+SNM+T+R PP ITVNKSA  A Y+LTYIR
Sbjct: 62  SGGEASIVAEIVEVE---DNSSSNMQTVRIPPVITVNKSAAYALYDLTYIR 109



 Score = 27.3 bits (59), Expect(2) = 9e-09
 Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = +1

Query: 301 IKASKMRKC--FTRFK*LDCTSKIVINLAVPN 390
           +  SK+ KC   +    L+C++KIV+NLAVP+
Sbjct: 28  LSKSKLEKCEKTSDSGNLNCSTKIVLNLAVPS 59


>ref|XP_002872619.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318456|gb|EFH48878.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 708

 Score = 59.3 bits (142), Expect(2) = 9e-09
 Identities = 34/51 (66%), Positives = 42/51 (82%), Gaps = 2/51 (3%)
 Frame = +3

Query: 477 SGRESSIVAELVEVEADENSSTSNMRTLRSPPAITVNKSA--ASYELTYIR 623
           SG E+SIVAE+VEVE   ++S+SNM+T+R PP ITVNKSA  A Y+LTYIR
Sbjct: 62  SGGEASIVAEIVEVE---DNSSSNMQTVRIPPVITVNKSAAYALYDLTYIR 109



 Score = 27.3 bits (59), Expect(2) = 9e-09
 Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = +1

Query: 301 IKASKMRKC--FTRFK*LDCTSKIVINLAVPN 390
           +  SK+ KC   +    L+C++KIV+NLAVP+
Sbjct: 28  LSKSKLEKCEKTSDSGNLNCSTKIVLNLAVPS 59


>ref|NP_192909.2| protein hapless 2 [Arabidopsis thaliana]
           gi|385178638|sp|F4JP36.1|HAP2_ARATH RecName:
           Full=Protein HAPLESS 2; AltName: Full=GENERATIVE CELL
           SPECIFIC 1; Flags: Precursor gi|332657641|gb|AEE83041.1|
           protein hapless 2 [Arabidopsis thaliana]
          Length = 705

 Score = 59.3 bits (142), Expect(2) = 9e-09
 Identities = 34/51 (66%), Positives = 42/51 (82%), Gaps = 2/51 (3%)
 Frame = +3

Query: 477 SGRESSIVAELVEVEADENSSTSNMRTLRSPPAITVNKSA--ASYELTYIR 623
           SG E+SIVAE+VEVE   ++S+SNM+T+R PP ITVNKSA  A Y+LTYIR
Sbjct: 62  SGGEASIVAEIVEVE---DNSSSNMQTVRIPPVITVNKSAAYALYDLTYIR 109



 Score = 27.3 bits (59), Expect(2) = 9e-09
 Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = +1

Query: 301 IKASKMRKC--FTRFK*LDCTSKIVINLAVPN 390
           +  SK+ KC   +    L+C++KIV+NLAVP+
Sbjct: 28  LSKSKLEKCEKTSDSGNLNCSTKIVLNLAVPS 59


>gb|AAY51998.1| HAP2 [Arabidopsis thaliana] gi|66731631|gb|AAY51999.1| HAP2
           [Arabidopsis thaliana] gi|154425503|dbj|BAE71143.2|
           generative cell specific-1 [Arabidopsis thaliana]
          Length = 705

 Score = 59.3 bits (142), Expect(2) = 9e-09
 Identities = 34/51 (66%), Positives = 42/51 (82%), Gaps = 2/51 (3%)
 Frame = +3

Query: 477 SGRESSIVAELVEVEADENSSTSNMRTLRSPPAITVNKSA--ASYELTYIR 623
           SG E+SIVAE+VEVE   ++S+SNM+T+R PP ITVNKSA  A Y+LTYIR
Sbjct: 62  SGGEASIVAEIVEVE---DNSSSNMQTVRIPPVITVNKSAAYALYDLTYIR 109



 Score = 27.3 bits (59), Expect(2) = 9e-09
 Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = +1

Query: 301 IKASKMRKC--FTRFK*LDCTSKIVINLAVPN 390
           +  SK+ KC   +    L+C++KIV+NLAVP+
Sbjct: 28  LSKSKLEKCEKTSDSGNLNCSTKIVLNLAVPS 59


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