BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005399
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33630.1| unknown [Lotus japonicus]                               95   7e-18
ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containi...    93   2e-17
emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]    93   2e-17
ref|XP_003612457.1| Pentatricopeptide repeat-containing protein ...    91   8e-17
ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16

>gb|AFK33630.1| unknown [Lotus japonicus]
          Length = 356

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 52/130 (40%), Positives = 69/130 (53%)
 Frame = -1

Query: 390 IPIDIYTSLLKECTETRDLTQAIELHQHMIXXXXXXXXXXXXXXXLMYGYCGCMSIARQL 211
           IPIDIYTSL+KECT + D   AIELH H+                +M+  CG +  A QL
Sbjct: 28  IPIDIYTSLIKECTLSPDPQTAIELHTHIAHSGIKPPLSFINRILVMFVSCGLLDYACQL 87

Query: 210 FDDMHVKDYNSWAAMLAGYMSCGEYDEAINLFVEMQGDEYGEKNVGWFRDSWLLVCIIQA 31
           FD M VKD+NSWA +   Y    +Y+EAI++F+ M   + G          W+  C ++A
Sbjct: 88  FDAMPVKDFNSWATLFIAYYDNADYEEAIDVFLAML-HQLGMSEF----PPWICACFLKA 142

Query: 30  CVHTENFELG 1
           C   EN  LG
Sbjct: 143 CACIENIPLG 152


>ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Vitis vinifera]
          Length = 414

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 55/134 (41%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
 Frame = -1

Query: 396 ISIPIDIYTSLLKECTETRDLTQAIELHQHMIXXXXXXXXXXXXXXXLMYGYCGCMSIAR 217
           + IP DIY SL+KE + T D TQA +L  H+                LMY  CG +  AR
Sbjct: 73  LPIPPDIYASLIKESSTTGDATQATQLLAHINRSGLPLSSALLNRILLMYVSCGLIHTAR 132

Query: 216 QLFDDMHVKDYNS--WAAMLAGYMSCGEYDEAINLFVEMQGDEYGEKNVGWFRDSWLLVC 43
            +FD M+V + NS  WA MLA YM  G Y+EAI LFV+M         +     +W+ +C
Sbjct: 133 HMFDKMNVLNKNSISWAIMLAAYMDNGFYEEAIFLFVQMM---ELHSTIMLELPAWIFIC 189

Query: 42  IIQACVHTENFELG 1
           +++ACVHT N  LG
Sbjct: 190 VLKACVHTMNLTLG 203


>emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]
          Length = 543

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 55/134 (41%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
 Frame = -1

Query: 396 ISIPIDIYTSLLKECTETRDLTQAIELHQHMIXXXXXXXXXXXXXXXLMYGYCGCMSIAR 217
           + IP DIY SL+KE + T D TQA +L  H+                LMY  CG +  AR
Sbjct: 236 LPIPPDIYASLIKESSTTGDATQATQLLAHINRSGLPLSSALLNRILLMYVSCGLIHTAR 295

Query: 216 QLFDDMHVKDYNS--WAAMLAGYMSCGEYDEAINLFVEMQGDEYGEKNVGWFRDSWLLVC 43
            +FD M+V + NS  WA MLA YM  G Y+EAI LFV+M         +     +W+ +C
Sbjct: 296 HMFDKMNVLNKNSISWAIMLAAYMDNGFYEEAIFLFVQMM---ELHSTIMLELPAWIFIC 352

Query: 42  IIQACVHTENFELG 1
           +++ACVHT N  LG
Sbjct: 353 VLKACVHTMNLTLG 366


>ref|XP_003612457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513792|gb|AES95415.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 418

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 52/132 (39%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
 Frame = -1

Query: 390 IPIDIYTSLLKECTETRDLTQAIELHQHMIXXXXXXXXXXXXXXXLMYGYCGCMSIARQL 211
           I IDIYTSL+KECT + D   AIELH  +I               +M+  CG +  AR++
Sbjct: 88  ITIDIYTSLVKECTLSTDPETAIELHTQIITRGIELPLTLLNRILIMFVSCGLLENARRV 147

Query: 210 FDDMHVKDYNSWAAMLAGYMSCGEYDEAINLFVEM--QGDEYGEKNVGWFRDSWLLVCII 37
           FD M V+D++SWA +   Y   GEY+ AI++FV M  Q D      +G+    W+  C++
Sbjct: 148 FDVMSVRDFHSWATLFVSYYENGEYENAIDVFVSMLCQLDV-----MGFSFPPWIWSCLL 202

Query: 36  QACVHTENFELG 1
           +AC  T N  LG
Sbjct: 203 KACACTMNVPLG 214


>ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Glycine max]
          Length = 423

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 48/131 (36%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
 Frame = -1

Query: 390 IPIDIYTSLLKECTETRDLTQAIELHQHMIXXXXXXXXXXXXXXXLMYGYCGCMSIARQL 211
           +PIDIYTSL+KECT + D   AIEL  H+                +M+  CG +  AR +
Sbjct: 95  VPIDIYTSLIKECTVSGDPETAIELATHISKSGIKPPLPFLNRILVMFVSCGLLENARHM 154

Query: 210 FDDMHVKDYNSWAAMLAGYMSCGEYDEAINLFVEMQGDEYGEKNVGWFR-DSWLLVCIIQ 34
           FD M V+D+N+WA +   Y    +Y+EA N+FV M         +G      W+  C+++
Sbjct: 155 FDKMRVRDFNTWATLFVAYYDNTDYEEATNVFVNML------TQLGMMEFPPWIWACLLR 208

Query: 33  ACVHTENFELG 1
           AC  T N  LG
Sbjct: 209 ACACTVNVPLG 219