BLASTX nr result

ID: Bupleurum21_contig00005392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005392
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29503.3| unnamed protein product [Vitis vinifera]              169   3e-40
ref|XP_002326661.1| predicted protein [Populus trichocarpa] gi|2...   162   4e-38
ref|XP_002304294.1| predicted protein [Populus trichocarpa] gi|2...   161   7e-38
ref|XP_002531465.1| conserved hypothetical protein [Ricinus comm...   159   2e-37
ref|XP_003608671.1| Glycoprotein-like protein [Medicago truncatu...   127   1e-27

>emb|CBI29503.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  169 bits (428), Expect = 3e-40
 Identities = 87/144 (60%), Positives = 105/144 (72%)
 Frame = +2

Query: 119 SSKVQENSQNPSKFYNQFFYKXXXXXXXXXXXXXXXSQAPDFINQTLHTTSWEILQLIFV 298
           +S   +N  NPSKFY+ F YK               SQAP+FINQT+   SWE+L L+FV
Sbjct: 4   TSTTPQNQANPSKFYSGFLYKALIVTLFLAILPLFPSQAPEFINQTVFNRSWELLHLVFV 63

Query: 299 GIAVTYGLFSKRNDAIDKDLHSSKFDNAQSYVSGLLQVSSVFDDETESPPASFENKVQTW 478
           GIAV+YGLFS+RND  +K+ H SKFDNAQSYVS  LQVSSVFD+E ESP  S E+KVQTW
Sbjct: 64  GIAVSYGLFSRRNDETEKENH-SKFDNAQSYVSRFLQVSSVFDEEVESPSGSGESKVQTW 122

Query: 479 NSQYYRGEPPMVVVAPESSVLDQE 550
           NSQYYRG+ P+VVV  ESSV+D++
Sbjct: 123 NSQYYRGK-PVVVVTQESSVIDEQ 145


>ref|XP_002326661.1| predicted protein [Populus trichocarpa] gi|222833983|gb|EEE72460.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score =  162 bits (409), Expect = 4e-38
 Identities = 83/148 (56%), Positives = 108/148 (72%), Gaps = 4/148 (2%)
 Frame = +2

Query: 122 SKVQENSQ-NPSKFYNQFFYKXXXXXXXXXXXXXXXSQAPDFINQTLHTTSWEILQLIFV 298
           +K Q+  Q NP+K+Y  F YK               SQAP+F+NQTL+T  WE L+L+FV
Sbjct: 8   TKYQQLKQANPTKYYTNFLYKALIVTIFLIILQLFPSQAPEFLNQTLNTRGWEFLRLVFV 67

Query: 299 GIAVTYGLFSKRNDAIDKDLHS---SKFDNAQSYVSGLLQVSSVFDDETESPPASFENKV 469
           GIAV+YGLFS+RND  +K++++   S+FDNAQSYVS  LQVSSVFDDE +SPP S E KV
Sbjct: 68  GIAVSYGLFSRRNDETEKEINNSNPSRFDNAQSYVSRFLQVSSVFDDEVDSPPESEETKV 127

Query: 470 QTWNSQYYRGEPPMVVVAPESSVLDQEQ 553
           QTW++QYYR + P+VVVA ++S LD+EQ
Sbjct: 128 QTWSNQYYRND-PVVVVAEQNSALDKEQ 154


>ref|XP_002304294.1| predicted protein [Populus trichocarpa] gi|222841726|gb|EEE79273.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score =  161 bits (407), Expect = 7e-38
 Identities = 83/145 (57%), Positives = 102/145 (70%), Gaps = 4/145 (2%)
 Frame = +2

Query: 131 QENSQNPSKFYNQFFYKXXXXXXXXXXXXXXXSQAPDFINQTLHTTSWEILQLIFVGIAV 310
           Q+   NP+K+Y  F YK               SQAP+FINQTL+T  WE L L+FVGIAV
Sbjct: 12  QQKQANPTKYYTHFLYKALIVTVFLIILPLFPSQAPEFINQTLNTRGWEFLHLVFVGIAV 71

Query: 311 TYGLFSKRNDAIDKD----LHSSKFDNAQSYVSGLLQVSSVFDDETESPPASFENKVQTW 478
           +YGLFSKRND  +K+     + SKFDNAQSYVS  LQVSSVFDD+ +S P S E KVQTW
Sbjct: 72  SYGLFSKRNDETEKENNNSSNQSKFDNAQSYVSRFLQVSSVFDDDVDSSPKSGETKVQTW 131

Query: 479 NSQYYRGEPPMVVVAPESSVLDQEQ 553
           ++QYYR + P+VVVA ++SVLD+EQ
Sbjct: 132 SNQYYRND-PVVVVAEQNSVLDKEQ 155


>ref|XP_002531465.1| conserved hypothetical protein [Ricinus communis]
           gi|223528919|gb|EEF30915.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 565

 Score =  159 bits (403), Expect = 2e-37
 Identities = 87/165 (52%), Positives = 106/165 (64%), Gaps = 4/165 (2%)
 Frame = +2

Query: 71  MAEESSVISKQQRLGASSKVQENSQNPSKFYNQFFYKXXXXXXXXXXXXXXXSQAPDFIN 250
           MA+ ++  +K Q+   ++    N+ NPSKFY+ F YK               SQAP+FIN
Sbjct: 1   MADNTTYYTKHQQQNQAN----NNNNPSKFYSHFLYKALIVTIFLVILPLFPSQAPEFIN 56

Query: 251 QTLHTTSWEILQLIFVGIAVTYGLFSKRNDAIDKDLHS-SKFDNAQSYVSGLLQVSSVFD 427
           QTL+T  WE L LIFVGIAV+YGLFS+RND  +KD  S SKFDNAQSYVS  LQVSSVFD
Sbjct: 57  QTLNTRGWEFLHLIFVGIAVSYGLFSRRNDETEKDNSSNSKFDNAQSYVSRFLQVSSVFD 116

Query: 428 DETESP---PASFENKVQTWNSQYYRGEPPMVVVAPESSVLDQEQ 553
           D+ +SP     S    VQTWN+QYYR EP +VV   +    DQEQ
Sbjct: 117 DDADSPSKSDVSNSTSVQTWNNQYYRNEPVVVVAEEQHPAFDQEQ 161


>ref|XP_003608671.1| Glycoprotein-like protein [Medicago truncatula]
           gi|355509726|gb|AES90868.1| Glycoprotein-like protein
           [Medicago truncatula]
          Length = 483

 Score =  127 bits (319), Expect = 1e-27
 Identities = 78/171 (45%), Positives = 106/171 (61%), Gaps = 11/171 (6%)
 Frame = +2

Query: 74  AEESSVISKQQRLGASSKVQENSQNPSKFYNQFFYKXXXXXXXXXXXXXXXSQAPDFINQ 253
           A  S  I+K Q+      V++N Q P+KF+  F YK               SQAP+FI+Q
Sbjct: 3   APTSIQITKHQK-PTLDNVKQNQQEPNKFHYNFAYKATIVLIFFVILPLLPSQAPEFISQ 61

Query: 254 TLHTTSWEILQLIFVGIAVTYGLFSKRNDAIDKD-LHSSKFDNAQSYVSGLLQVSSVFDD 430
            L T +WE+L L+FVGIA++YGLFS+RN   DKD  +++KFDNAQS VS  LQVSS F+D
Sbjct: 62  NLLTRNWELLHLLFVGIAISYGLFSRRNQEPDKDNNNNTKFDNAQSLVSRFLQVSSFFED 121

Query: 431 ETESPPASFE---NKVQTWN--SQYYRGEPPMVVVAP-----ESSVLDQEQ 553
           E +    S     NK+QTW+  +Q+YR + PMV+VAP     ++SV + EQ
Sbjct: 122 EVDHQNQSESEDINKIQTWSNQNQHYRNK-PMVIVAPQVQQLQNSVFEDEQ 171


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