BLASTX nr result

ID: Bupleurum21_contig00005375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005375
         (992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284532.2| PREDICTED: probable NOT transcription comple...   451   e-124
emb|CBI16210.3| unnamed protein product [Vitis vinifera]              451   e-124
gb|AEV43364.1| VirE2-interacting protein 2-like protein [Citrus ...   434   e-119
ref|XP_002530232.1| CCR4-NOT transcription complex subunit, puta...   433   e-119
ref|XP_003539751.1| PREDICTED: probable NOT transcription comple...   429   e-118

>ref|XP_002284532.2| PREDICTED: probable NOT transcription complex subunit VIP2-like
            [Vitis vinifera]
          Length = 666

 Score =  451 bits (1161), Expect = e-124
 Identities = 211/281 (75%), Positives = 243/281 (86%), Gaps = 1/281 (0%)
 Frame = +1

Query: 1    QQHTPSASSGSLSFSNVNNQDLLHMHGSDLFASSHSSFHSQNTGSPGTGLRPVNSPNSVS 180
            QQH P+ SSG +SFS VNNQDLLH+HGSD+F SSHS++HSQ +G PG GLRP+NSPN+VS
Sbjct: 385  QQHAPAVSSGGVSFSPVNNQDLLHLHGSDIFPSSHSTYHSQTSGPPGIGLRPLNSPNTVS 444

Query: 181  GMG-YDXXXXXXXXXXXXXXFRLQQISAISQSHRDQGMKSMQAAPTPSDPYGLLGLLSVI 357
            GMG YD              FRLQQ+SA+SQ+ RDQGMKSMQA     DP+GLLGLLSVI
Sbjct: 445  GMGSYDQLIQQYQQHQNQSQFRLQQMSAVSQAFRDQGMKSMQATQAAPDPFGLLGLLSVI 504

Query: 358  RMSDPDLTSLALGIDLTTLGLNLNSAENLHKAFGSPWSDEPAKGDPEFAVPQCYYAKQSP 537
            RMSDPDLTSLALGIDLTTLGLNLNSAENLHK FGSPWSDEPAKGDPEF+VPQCYYAKQ P
Sbjct: 505  RMSDPDLTSLALGIDLTTLGLNLNSAENLHKTFGSPWSDEPAKGDPEFSVPQCYYAKQPP 564

Query: 538  SLYEVYFQKFQLDTLFYIFYSMPKEEAQLYAAHELYNRQWFYHKEQRLWFMRAANTEPMV 717
            +L++ YF KFQ++TLFYIFYSMPK+EAQLYAA+ELYNR WF+H+E RLWF+R AN EP+V
Sbjct: 565  ALHQGYFLKFQVETLFYIFYSMPKDEAQLYAANELYNRGWFFHREHRLWFIRVANMEPLV 624

Query: 718  KTNTYERGSYICFDPNTWETIRKDNFVVHYDLLEKRPAVPQ 840
            KTNTYERGSY+CFDPNTWE++RKDNFV+HY+LLEK+P +PQ
Sbjct: 625  KTNTYERGSYLCFDPNTWESVRKDNFVLHYELLEKKPPLPQ 665


>emb|CBI16210.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score =  451 bits (1161), Expect = e-124
 Identities = 211/281 (75%), Positives = 243/281 (86%), Gaps = 1/281 (0%)
 Frame = +1

Query: 1    QQHTPSASSGSLSFSNVNNQDLLHMHGSDLFASSHSSFHSQNTGSPGTGLRPVNSPNSVS 180
            QQH P+ SSG +SFS VNNQDLLH+HGSD+F SSHS++HSQ +G PG GLRP+NSPN+VS
Sbjct: 347  QQHAPAVSSGGVSFSPVNNQDLLHLHGSDIFPSSHSTYHSQTSGPPGIGLRPLNSPNTVS 406

Query: 181  GMG-YDXXXXXXXXXXXXXXFRLQQISAISQSHRDQGMKSMQAAPTPSDPYGLLGLLSVI 357
            GMG YD              FRLQQ+SA+SQ+ RDQGMKSMQA     DP+GLLGLLSVI
Sbjct: 407  GMGSYDQLIQQYQQHQNQSQFRLQQMSAVSQAFRDQGMKSMQATQAAPDPFGLLGLLSVI 466

Query: 358  RMSDPDLTSLALGIDLTTLGLNLNSAENLHKAFGSPWSDEPAKGDPEFAVPQCYYAKQSP 537
            RMSDPDLTSLALGIDLTTLGLNLNSAENLHK FGSPWSDEPAKGDPEF+VPQCYYAKQ P
Sbjct: 467  RMSDPDLTSLALGIDLTTLGLNLNSAENLHKTFGSPWSDEPAKGDPEFSVPQCYYAKQPP 526

Query: 538  SLYEVYFQKFQLDTLFYIFYSMPKEEAQLYAAHELYNRQWFYHKEQRLWFMRAANTEPMV 717
            +L++ YF KFQ++TLFYIFYSMPK+EAQLYAA+ELYNR WF+H+E RLWF+R AN EP+V
Sbjct: 527  ALHQGYFLKFQVETLFYIFYSMPKDEAQLYAANELYNRGWFFHREHRLWFIRVANMEPLV 586

Query: 718  KTNTYERGSYICFDPNTWETIRKDNFVVHYDLLEKRPAVPQ 840
            KTNTYERGSY+CFDPNTWE++RKDNFV+HY+LLEK+P +PQ
Sbjct: 587  KTNTYERGSYLCFDPNTWESVRKDNFVLHYELLEKKPPLPQ 627


>gb|AEV43364.1| VirE2-interacting protein 2-like protein [Citrus sinensis]
          Length = 603

 Score =  434 bits (1116), Expect = e-119
 Identities = 209/281 (74%), Positives = 237/281 (84%), Gaps = 1/281 (0%)
 Frame = +1

Query: 1    QQHTPSASSGSLSFSNVNNQDLLHMHGSDLFASSHSSFHSQNTGSPGTGLRPVNSPNSVS 180
            QQH PS SS  +SFS+VNNQDLLH+HGSD+F SSHSS+HSQ +G PG GLRP+NS N VS
Sbjct: 324  QQHAPSVSSSGVSFSSVNNQDLLHLHGSDMFPSSHSSYHSQTSGPPGIGLRPLNSQNPVS 383

Query: 181  GMG-YDXXXXXXXXXXXXXXFRLQQISAISQSHRDQGMKSMQAAPTPSDPYGLLGLLSVI 357
            GMG YD              FRLQQ+SA++QS R+Q MKS+QAA +  DP+GLLGLLSVI
Sbjct: 384  GMGSYDQLVQYQHQNPSQ--FRLQQMSAVNQSFRNQDMKSIQAAHSTPDPFGLLGLLSVI 441

Query: 358  RMSDPDLTSLALGIDLTTLGLNLNSAENLHKAFGSPWSDEPAKGDPEFAVPQCYYAKQSP 537
            +MSDPDLTSLALGIDLTTLGLNLNS ENLHK FGSPWSDEPAKGDPEF VPQCYYAKQ P
Sbjct: 442  KMSDPDLTSLALGIDLTTLGLNLNSTENLHKTFGSPWSDEPAKGDPEFTVPQCYYAKQPP 501

Query: 538  SLYEVYFQKFQLDTLFYIFYSMPKEEAQLYAAHELYNRQWFYHKEQRLWFMRAANTEPMV 717
            +L++ YF KF ++TLFYIFYSMPK+EAQLYAA+ELYNR WFYHKE RLWF+R  N EP+V
Sbjct: 502  ALHQGYFSKFTVETLFYIFYSMPKDEAQLYAANELYNRGWFYHKEHRLWFIRVPNVEPLV 561

Query: 718  KTNTYERGSYICFDPNTWETIRKDNFVVHYDLLEKRPAVPQ 840
            KTN YERGSY CFDPNT+ETIRKDNFVVHY++LEKRPA+PQ
Sbjct: 562  KTNAYERGSYHCFDPNTFETIRKDNFVVHYEMLEKRPALPQ 602


>ref|XP_002530232.1| CCR4-NOT transcription complex subunit, putative [Ricinus communis]
            gi|223530236|gb|EEF32138.1| CCR4-NOT transcription
            complex subunit, putative [Ricinus communis]
          Length = 664

 Score =  433 bits (1114), Expect = e-119
 Identities = 209/281 (74%), Positives = 236/281 (83%), Gaps = 1/281 (0%)
 Frame = +1

Query: 1    QQHTPSASSGSLSFSNVNNQDLLHMHGSDLFASSHSSFHSQNTGSPGTGLRPVNSPNSVS 180
            QQH P+ SS  +SFS VNNQDLLH  GSD+F SSHS++HSQ  G PG GLRP+NSPN+VS
Sbjct: 385  QQHAPAVSSSGVSFSPVNNQDLLH--GSDIFPSSHSTYHSQTNGPPGIGLRPLNSPNTVS 442

Query: 181  GMG-YDXXXXXXXXXXXXXXFRLQQISAISQSHRDQGMKSMQAAPTPSDPYGLLGLLSVI 357
            G+G YD              FRLQQ+SA++QS RDQGMKSMQAA +  DP+GLLGLLSVI
Sbjct: 443  GIGSYDQLIQQYQQHQNQSQFRLQQMSAVNQSFRDQGMKSMQAAQSAPDPFGLLGLLSVI 502

Query: 358  RMSDPDLTSLALGIDLTTLGLNLNSAENLHKAFGSPWSDEPAKGDPEFAVPQCYYAKQSP 537
            RMSDPDLTSLALGIDLTTLGLNLNS ENLHK FGSPWSDEPAKGDPEF VPQCYYAKQ P
Sbjct: 503  RMSDPDLTSLALGIDLTTLGLNLNSTENLHKTFGSPWSDEPAKGDPEFNVPQCYYAKQPP 562

Query: 538  SLYEVYFQKFQLDTLFYIFYSMPKEEAQLYAAHELYNRQWFYHKEQRLWFMRAANTEPMV 717
            +L++ YF KF ++TLFYIFYSMPK+EAQLYAA+ELYNR WFYHKE RLWF+R  N EP+V
Sbjct: 563  ALHQGYFSKFTVETLFYIFYSMPKDEAQLYAANELYNRGWFYHKEHRLWFIRVPNVEPLV 622

Query: 718  KTNTYERGSYICFDPNTWETIRKDNFVVHYDLLEKRPAVPQ 840
            KTNTYERGSY CFDPNT+E IRKDNFV+HY++LEKRPA+PQ
Sbjct: 623  KTNTYERGSYHCFDPNTFEIIRKDNFVLHYEMLEKRPALPQ 663


>ref|XP_003539751.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
            [Glycine max]
          Length = 658

 Score =  429 bits (1103), Expect = e-118
 Identities = 204/281 (72%), Positives = 236/281 (83%), Gaps = 1/281 (0%)
 Frame = +1

Query: 1    QQHTPSASSGSLSFSNVNNQDLLHMHGSDLFASSHSSFHSQNTGSPGTGLRPVNSPNSVS 180
            QQH PS SSG++SFS+VNNQDLLH+HGSD+F SSHS++HSQ +G PG GLRP+NSPN+VS
Sbjct: 378  QQHAPSVSSGNVSFSSVNNQDLLHLHGSDIFPSSHSTYHSQTSGPPGIGLRPLNSPNTVS 437

Query: 181  GMG-YDXXXXXXXXXXXXXXFRLQQISAISQSHRDQGMKSMQAAPTPSDPYGLLGLLSVI 357
            GMG YD              FRLQ +SA++QS RDQGMKS+Q A    DP+GLLGLLSVI
Sbjct: 438  GMGSYDQLIQQYQQHQNQSQFRLQ-MSAVNQSFRDQGMKSIQTAQPAPDPFGLLGLLSVI 496

Query: 358  RMSDPDLTSLALGIDLTTLGLNLNSAENLHKAFGSPWSDEPAKGDPEFAVPQCYYAKQSP 537
            RMSDPDLTSLALGIDLTTLGLNLNS+ENLHK FGSPWSDE AKGDPEF VPQCYYAKQ P
Sbjct: 497  RMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDESAKGDPEFTVPQCYYAKQPP 556

Query: 538  SLYEVYFQKFQLDTLFYIFYSMPKEEAQLYAAHELYNRQWFYHKEQRLWFMRAANTEPMV 717
            +L++ YF KF ++TLFY+FYSMPK+EAQ YAA ELYNR WFYHKE RLWF+R  N EP+V
Sbjct: 557  ALHQGYFSKFSVETLFYLFYSMPKDEAQFYAASELYNRGWFYHKEHRLWFIRVPNMEPLV 616

Query: 718  KTNTYERGSYICFDPNTWETIRKDNFVVHYDLLEKRPAVPQ 840
            KTNTYERGSY CFDP+ +ET+RKDNFV+HY++LEKRP +PQ
Sbjct: 617  KTNTYERGSYHCFDPSIFETVRKDNFVLHYEMLEKRPHLPQ 657


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