BLASTX nr result

ID: Bupleurum21_contig00005367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005367
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144868.1| PREDICTED: heterodimeric geranylgeranyl pyro...   242   3e-62
ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, puta...   239   2e-61
ref|XP_002312936.1| predicted protein [Populus trichocarpa] gi|2...   239   2e-61
gb|AEZ55680.1| geranyl diphosphate synthase small subunit type I...   238   4e-61
ref|XP_002306207.1| predicted protein [Populus trichocarpa] gi|2...   238   5e-61

>ref|XP_004144868.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic-like [Cucumis sativus]
           gi|449508802|ref|XP_004163415.1| PREDICTED:
           heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic-like [Cucumis sativus]
          Length = 335

 Score =  242 bits (617), Expect = 3e-62
 Identities = 114/129 (88%), Positives = 121/129 (93%)
 Frame = +2

Query: 74  HFDLKTYWGTLISEIDEKLDEAIQIQYPNQIYEAMRYSVLAQGAKRAPPVMCVAACELFG 253
           HFDLKTYW  LI EI++KLDEA+ +QYP+QIYEAMRYSVLAQGAKRAPPVMCVAACELFG
Sbjct: 39  HFDLKTYWKQLILEINQKLDEAVPLQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFG 98

Query: 254 GDRRAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGRPSNHTIYGTDMAILAGDALFPL 433
            DR AAFPTACALEMVH ASLIHDDLPCMDDDPSRRG+PSNHT+YG DMAILAGDALFPL
Sbjct: 99  VDRLAAFPTACALEMVHEASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPL 158

Query: 434 GFQHIVSHT 460
           GFQHIVSHT
Sbjct: 159 GFQHIVSHT 167


>ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
           gi|223530713|gb|EEF32584.1| geranyl geranyl
           pyrophosphate synthase, putative [Ricinus communis]
          Length = 345

 Score =  239 bits (609), Expect = 2e-61
 Identities = 111/131 (84%), Positives = 123/131 (93%)
 Frame = +2

Query: 68  TTHFDLKTYWGTLISEIDEKLDEAIQIQYPNQIYEAMRYSVLAQGAKRAPPVMCVAACEL 247
           +T FDLKTYW TLI+EI++KLD+AI +Q+P QIYEAMRYS LA+GAKRAPPVMCVAACEL
Sbjct: 49  STQFDLKTYWTTLIAEINQKLDQAIPVQFPEQIYEAMRYSALAKGAKRAPPVMCVAACEL 108

Query: 248 FGGDRRAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGRPSNHTIYGTDMAILAGDALF 427
           FGG+R AAFPTACALEMVH ASLIHDDLPCMDDDPSRRG+PSNHTIYG DMAILAGDALF
Sbjct: 109 FGGNRLAAFPTACALEMVHTASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALF 168

Query: 428 PLGFQHIVSHT 460
           PLG++HIVSHT
Sbjct: 169 PLGYRHIVSHT 179


>ref|XP_002312936.1| predicted protein [Populus trichocarpa] gi|222849344|gb|EEE86891.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  239 bits (609), Expect = 2e-61
 Identities = 112/131 (85%), Positives = 123/131 (93%)
 Frame = +2

Query: 68  TTHFDLKTYWGTLISEIDEKLDEAIQIQYPNQIYEAMRYSVLAQGAKRAPPVMCVAACEL 247
           T  FDLKTYW TLI EI++KLD+A+ IQYP++IYEAMRYSVLA+GAKRAPPVMCVAACEL
Sbjct: 16  TPQFDLKTYWTTLILEINQKLDQAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACEL 75

Query: 248 FGGDRRAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGRPSNHTIYGTDMAILAGDALF 427
           FGG+R AAFPTACALEMVH+ASLIHDDLPCMDDDPSRRG+PSNH IYG DMAILAGDALF
Sbjct: 76  FGGNRHAAFPTACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHKIYGVDMAILAGDALF 135

Query: 428 PLGFQHIVSHT 460
           PLGF+HIVSHT
Sbjct: 136 PLGFRHIVSHT 146


>gb|AEZ55680.1| geranyl diphosphate synthase small subunit type II.2 [Salvia
           miltiorrhiza]
          Length = 331

 Score =  238 bits (607), Expect = 4e-61
 Identities = 110/128 (85%), Positives = 122/128 (95%)
 Frame = +2

Query: 77  FDLKTYWGTLISEIDEKLDEAIQIQYPNQIYEAMRYSVLAQGAKRAPPVMCVAACELFGG 256
           FDLKTYW +LI EID+KLDEAI ++YP QIYEAMRYSVLA+GAKRAPPVMCVAACE+FGG
Sbjct: 38  FDLKTYWTSLIKEIDQKLDEAIPVKYPQQIYEAMRYSVLAKGAKRAPPVMCVAACEIFGG 97

Query: 257 DRRAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGRPSNHTIYGTDMAILAGDALFPLG 436
           +R AAFPTACALEMVH+ASLIHDDLPCMDDDPSRRG+PSNHT++G DMAILAGDALFPLG
Sbjct: 98  NRLAAFPTACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHTVFGVDMAILAGDALFPLG 157

Query: 437 FQHIVSHT 460
           F+HIVSHT
Sbjct: 158 FRHIVSHT 165


>ref|XP_002306207.1| predicted protein [Populus trichocarpa] gi|222849171|gb|EEE86718.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  238 bits (606), Expect = 5e-61
 Identities = 112/131 (85%), Positives = 122/131 (93%)
 Frame = +2

Query: 68  TTHFDLKTYWGTLISEIDEKLDEAIQIQYPNQIYEAMRYSVLAQGAKRAPPVMCVAACEL 247
           T  FDLKTYW TLI EI+++LD+A+ IQYP++IYEAMRYSVLA+GAKRAPPVMCVAACEL
Sbjct: 49  TAQFDLKTYWTTLIGEINQELDQAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACEL 108

Query: 248 FGGDRRAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGRPSNHTIYGTDMAILAGDALF 427
           FGG+R AAFPTACALEMVHAASLIHDDLPCMDDDPSRRG+PSNHTIYG DMAILAGDALF
Sbjct: 109 FGGNRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALF 168

Query: 428 PLGFQHIVSHT 460
           PLGF HIVS T
Sbjct: 169 PLGFSHIVSQT 179


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