BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005358
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79244.1|AC006917_29 F10B6.15 [Arabidopsis thaliana]              76   5e-12
ref|NP_172928.2| cyclin-SDS [Arabidopsis thaliana] gi|147637577|...    76   5e-12
emb|CBI26804.3| unnamed protein product [Vitis vinifera]               75   9e-12
ref|XP_002281487.1| PREDICTED: cyclin-SDS-like [Vitis vinifera]        73   6e-11
ref|XP_002892827.1| hypothetical protein ARALYDRAFT_471662 [Arab...    70   3e-10

>gb|AAF79244.1|AC006917_29 F10B6.15 [Arabidopsis thaliana]
          Length = 648

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 84/276 (30%), Positives = 127/276 (46%), Gaps = 51/276 (18%)
 Frame = +2

Query: 8   RRKRTQISPIDIYLAAAYARQV--------------SEDDVSCISSRVSK----KRSFEE 133
           RRKR QISP+ +  +  +++Q+              ++D+VSC SSRV K    K++  E
Sbjct: 24  RRKRAQISPV-LVQSPLWSKQIGVSAASVDSCSDLLADDNVSCGSSRVEKSSNPKKTLIE 82

Query: 134 AVGEIAKVGGGVGE------LRRITRSYYR-KLESENAKPETSEASCVESYPGDNLKETI 292
            V E++K G  V E       RRITRSY +   E E  + E SE+SCV+S  G  L+   
Sbjct: 83  EV-EVSKPGYNVKETIGDSKFRRITRSYSKLHKEKEGDEIEVSESSCVDSNSGAGLR--- 138

Query: 293 PKLKLKVGKTSQNSNEIAQSNDFSSVSQFSKSDGGDGKAEAKIG---------EFCSKTI 445
            +L +K  K + N       +D +     S S   + ++E K           E+CSK  
Sbjct: 139 -RLNVKGNKINDNDEISFSRSDVTFAGHVSNSRSLNFESENKESDVVSVISGVEYCSKFG 197

Query: 446 KIGKNRD----ELSQVSRNADTISNCESN-------------SDRFVKHTGSDSVSEGGD 574
            +    D    E+S+ S   +  S+  S              SD       S+ VS+  D
Sbjct: 198 SVTGGADNEEIEISKPSSFVEADSSLGSAKELKPELEIVGCVSDLACSEKFSEEVSDSLD 257

Query: 575 NEYSSAAYTDDYESFTSDFDLDDYISSEWYESGSQF 682
           +E SS   ++ Y  + SDFD  DY  S +++SGS+F
Sbjct: 258 DE-SSEQRSEIYSQY-SDFDYSDYTPSIFFDSGSEF 291


>ref|NP_172928.2| cyclin-SDS [Arabidopsis thaliana]
           gi|147637577|sp|Q1PFW3.2|CCSDS_ARATH RecName:
           Full=Cyclin-SDS; AltName: Full=Protein SOLO DANCERS
           gi|20302467|emb|CAD30003.1| cyclin-like protein
           [Arabidopsis thaliana] gi|332191096|gb|AEE29217.1|
           cyclin-SDS [Arabidopsis thaliana]
          Length = 578

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 84/276 (30%), Positives = 127/276 (46%), Gaps = 51/276 (18%)
 Frame = +2

Query: 8   RRKRTQISPIDIYLAAAYARQV--------------SEDDVSCISSRVSK----KRSFEE 133
           RRKR QISP+ +  +  +++Q+              ++D+VSC SSRV K    K++  E
Sbjct: 29  RRKRAQISPV-LVQSPLWSKQIGVSAASVDSCSDLLADDNVSCGSSRVEKSSNPKKTLIE 87

Query: 134 AVGEIAKVGGGVGE------LRRITRSYYR-KLESENAKPETSEASCVESYPGDNLKETI 292
            V E++K G  V E       RRITRSY +   E E  + E SE+SCV+S  G  L+   
Sbjct: 88  EV-EVSKPGYNVKETIGDSKFRRITRSYSKLHKEKEGDEIEVSESSCVDSNSGAGLR--- 143

Query: 293 PKLKLKVGKTSQNSNEIAQSNDFSSVSQFSKSDGGDGKAEAKIG---------EFCSKTI 445
            +L +K  K + N       +D +     S S   + ++E K           E+CSK  
Sbjct: 144 -RLNVKGNKINDNDEISFSRSDVTFAGHVSNSRSLNFESENKESDVVSVISGVEYCSKFG 202

Query: 446 KIGKNRD----ELSQVSRNADTISNCESN-------------SDRFVKHTGSDSVSEGGD 574
            +    D    E+S+ S   +  S+  S              SD       S+ VS+  D
Sbjct: 203 SVTGGADNEEIEISKPSSFVEADSSLGSAKELKPELEIVGCVSDLACSEKFSEEVSDSLD 262

Query: 575 NEYSSAAYTDDYESFTSDFDLDDYISSEWYESGSQF 682
           +E SS   ++ Y  + SDFD  DY  S +++SGS+F
Sbjct: 263 DE-SSEQRSEIYSQY-SDFDYSDYTPSIFFDSGSEF 296


>emb|CBI26804.3| unnamed protein product [Vitis vinifera]
          Length = 549

 Score = 75.5 bits (184), Expect = 9e-12
 Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 38/265 (14%)
 Frame = +2

Query: 2   IPRRKRTQISPIDIYLAA----------AYARQVSEDDVSCISSRVS---KKRSFEEAVG 142
           +PRR+R+QISPI +Y  +           +A  +     S  SSR+S   +KR FEE +G
Sbjct: 25  LPRRRRSQISPI-LYTTSNSNAVRTKSGLHAFPLRSSSSSYNSSRISSFLRKREFEE-IG 82

Query: 143 EIAKVGGGVGELRRITRSYY------RKLESENAKPETSEASCVESYPGDNLKETIPKLK 304
               V  G  ++RRITRSYY      RKLE  +   E SE+SCVES  G +++     +K
Sbjct: 83  ASGAVTRGNEKVRRITRSYYRQKQNERKLEIGDGGVEASESSCVESCSGADVRSDARNIK 142

Query: 305 LKVGKTSQNSNEIAQSNDFSSVSQFSKSDGGDGKAEAKIGEFCSKTIKIGKN--RDELSQ 478
               K+S+      + ND ++    S + G +  +E K   F + +  +G      E+S+
Sbjct: 143 ----KSSER-----KDNDVTT----SVTSGVELSSEMK---FQNASSPLGNRALESEISR 186

Query: 479 VSRN----ADTISNCESNSDRFVK------------HTGSDSVSE-GGDNEYSSAAYTDD 607
            SRN      TISN  SNS++  K            +   D VS+    +E   +    D
Sbjct: 187 SSRNYVDANFTISNSGSNSEQMPKGLVFDCDLCCSEYLSYDEVSDYSSSHEMLISEMQTD 246

Query: 608 YESFTSDFDLDDYISSEWYESGSQF 682
                 + D  DY  S ++ESGS+F
Sbjct: 247 VLPENPELDFSDYTPSLFFESGSEF 271


>ref|XP_002281487.1| PREDICTED: cyclin-SDS-like [Vitis vinifera]
          Length = 605

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 88/295 (29%), Positives = 131/295 (44%), Gaps = 68/295 (23%)
 Frame = +2

Query: 2   IPRRKRTQISPIDIYLAA----------AYARQVSEDDVSCISSRVS---KKRSFEEAVG 142
           +PRR+R+QISPI +Y  +           +A  +     S  SSR+S   +KR FEE +G
Sbjct: 25  LPRRRRSQISPI-LYTTSNSNAVRTKSGLHAFPLRSSSSSYNSSRISSFLRKREFEE-IG 82

Query: 143 EIAKVGGGVGELRRITRSYY------RKLESENAKPETSEASCVESYPGDNLK---ETIP 295
               V  G  ++RRITRSYY      RKLE  +   E SE+SCVES  G +++   E   
Sbjct: 83  ASGAVTRGNEKVRRITRSYYRQKQNERKLEIGDGGVEASESSCVESCSGADVRVSAEASS 142

Query: 296 KLKLKVGKTSQ----NSN-EIAQSNDFSSVSQFS----KSDGGDGKAEAKIGE------- 427
           K K K  + ++    N N E    ++ SS+ Q +    KSD  + K  ++  +       
Sbjct: 143 KFKRKNAENAKIIGGNENPEAVLRSEISSIQQIAGENLKSDARNIKKSSERKDNDVTTSV 202

Query: 428 -----------FCSKTIKIGKN--RDELSQVSRN----ADTISNCESNSDRFVK------ 538
                      F + +  +G      E+S+ SRN      TISN  SNS++  K      
Sbjct: 203 TSGVELSSEMKFQNASSPLGNRALESEISRSSRNYVDANFTISNSGSNSEQMPKGLVFDC 262

Query: 539 ------HTGSDSVSE-GGDNEYSSAAYTDDYESFTSDFDLDDYISSEWYESGSQF 682
                 +   D VS+    +E   +    D      + D  DY  S ++ESGS+F
Sbjct: 263 DLCCSEYLSYDEVSDYSSSHEMLISEMQTDVLPENPELDFSDYTPSLFFESGSEF 317


>ref|XP_002892827.1| hypothetical protein ARALYDRAFT_471662 [Arabidopsis lyrata subsp.
           lyrata] gi|297338669|gb|EFH69086.1| hypothetical protein
           ARALYDRAFT_471662 [Arabidopsis lyrata subsp. lyrata]
          Length = 581

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 83/283 (29%), Positives = 120/283 (42%), Gaps = 58/283 (20%)
 Frame = +2

Query: 8   RRKRTQISPI---------DIYLAAAYARQ------VSEDDVSCISSRVSK----KRSFE 130
           RRKR QISP+          I ++AA          V++D+VSC SSRV K    K+S  
Sbjct: 29  RRKRAQISPVLVQSPLWSKQIGVSAASVDSCSDLLFVADDNVSCGSSRVEKSSNPKKSLI 88

Query: 131 EAVGEIAKVGGGVGEL------RRITRSYYRKL-ESENAKPETSEASCVESYPGDNLKET 289
           E V E++K G  V E+      RRITRSY +   E E  + E SE+SCV+S  G  L+  
Sbjct: 89  EEV-EVSKPGNNVKEVIGDSKFRRITRSYSKLYKEKEGDEIEVSESSCVDSNSGAGLRRL 147

Query: 290 IPK--------------------------LKLKVGKTSQNSNEIAQSNDFSSVSQFSKSD 391
             K                            L  G  ++ S+ ++  +     S+F    
Sbjct: 148 NVKGNEINDNDEISFSRSDVTFAGHVSNSRSLNFGSENKESDVVSVISGVECCSKFGSVT 207

Query: 392 GGDGKAEAKIGE---FCSKTIKIGKNRD---ELSQVSRNADTISNCESNSDRFVKHTGSD 553
           GG    E +I +   F      +G  ++   EL  V   +D ++  E  SD  V  +  D
Sbjct: 208 GGAENEEIEISKPSSFVEADSSLGSAKELKPELEIVGCVSD-LACTEKFSDEEVSDSFDD 266

Query: 554 SVSEGGDNEYSSAAYTDDYESFTSDFDLDDYISSEWYESGSQF 682
            +SE     +S            SDFD  DY  S +++SGS+F
Sbjct: 267 ELSEQRSEIFSQ----------YSDFDYSDYTPSIFFDSGSEF 299