BLASTX nr result

ID: Bupleurum21_contig00005355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005355
         (764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AED89990.1| PSL3c [Solanum chacoense x Solanum tuberosum]          166   5e-39
gb|AED89989.1| PSL3b [Solanum chacoense x Solanum tuberosum]          166   5e-39
gb|AED89988.1| PSL3a [Solanum chacoense x Solanum tuberosum]          166   5e-39
gb|AED89985.1| PSL1b [Solanum chacoense x Solanum tuberosum]          159   5e-37
gb|AED89984.1| PSL1a [Solanum chacoense x Solanum tuberosum]          159   5e-37

>gb|AED89990.1| PSL3c [Solanum chacoense x Solanum tuberosum]
          Length = 764

 Score =  166 bits (420), Expect = 5e-39
 Identities = 95/230 (41%), Positives = 125/230 (54%), Gaps = 5/230 (2%)
 Frame = +2

Query: 53  KEENEKKIPVFTVFKNNSILKNIFL-DAPPTPLKAXXXXXXXXXXXXIGRHPDCSITLDH 229
           + E EKKIPVFTV KN +ILKNIFL D PP    A            +GRHPDC+I L+H
Sbjct: 14  QSEEEKKIPVFTVLKNGAILKNIFLLDNPPATPVAITASQEFEEILVVGRHPDCNIVLEH 73

Query: 230 PSISRFHLRLISKPXXXXXXXXXXXXXXGTWVSGKKVEPGVQVTLNEGDTLRLGGSSRLY 409
           PSISRFHLR+ S P              G+W+SG K+EPGV+V L EGD ++LGGS R Y
Sbjct: 74  PSISRFHLRIHSNPSSHSLSVIDLSSVHGSWISGNKIEPGVRVELKEGDKMKLGGSRREY 133

Query: 410 VLHWVPVSRAYNLDDPFXXXXXXXXXXKESEELTNQDGN-FCSSIETSQVQSLCVNSEDM 586
           +LHW+P+SRAY+L++PF          KE +E  +QD N F    E   +    V  +D 
Sbjct: 134 MLHWIPISRAYDLENPFVAPLGEAEPFKEMDEKEHQDENGFALQNEGDDL----VQDQDS 189

Query: 587 DLSISKKDVKV---SPSAPPMLXXXXXXXXXXXXAKTGNLIREEHKQNEV 727
             S S     +   +PSAPPM              +  N + + H ++E+
Sbjct: 190 SFSCSSLFPYITCPTPSAPPMPEEMKSSFPYGDEEENINPLEKIHGESEI 239


>gb|AED89989.1| PSL3b [Solanum chacoense x Solanum tuberosum]
          Length = 630

 Score =  166 bits (420), Expect = 5e-39
 Identities = 95/230 (41%), Positives = 125/230 (54%), Gaps = 5/230 (2%)
 Frame = +2

Query: 53  KEENEKKIPVFTVFKNNSILKNIFL-DAPPTPLKAXXXXXXXXXXXXIGRHPDCSITLDH 229
           + E EKKIPVFTV KN +ILKNIFL D PP    A            +GRHPDC+I L+H
Sbjct: 14  QSEEEKKIPVFTVLKNGAILKNIFLLDNPPATPVAITASQEFEEILVVGRHPDCNIVLEH 73

Query: 230 PSISRFHLRLISKPXXXXXXXXXXXXXXGTWVSGKKVEPGVQVTLNEGDTLRLGGSSRLY 409
           PSISRFHLR+ S P              G+W+SG K+EPGV+V L EGD ++LGGS R Y
Sbjct: 74  PSISRFHLRIHSNPSSHSLSVIDLSSVHGSWISGNKIEPGVRVELKEGDKMKLGGSRREY 133

Query: 410 VLHWVPVSRAYNLDDPFXXXXXXXXXXKESEELTNQDGN-FCSSIETSQVQSLCVNSEDM 586
           +LHW+P+SRAY+L++PF          KE +E  +QD N F    E   +    V  +D 
Sbjct: 134 MLHWIPISRAYDLENPFVAPLGEAEPFKEMDEKEHQDENGFALQNEGDDL----VQDQDS 189

Query: 587 DLSISKKDVKV---SPSAPPMLXXXXXXXXXXXXAKTGNLIREEHKQNEV 727
             S S     +   +PSAPPM              +  N + + H ++E+
Sbjct: 190 SFSCSSLFPYITCPTPSAPPMPEEMKSSFPYGDEEENINPLEKIHGESEI 239


>gb|AED89988.1| PSL3a [Solanum chacoense x Solanum tuberosum]
          Length = 592

 Score =  166 bits (420), Expect = 5e-39
 Identities = 95/230 (41%), Positives = 125/230 (54%), Gaps = 5/230 (2%)
 Frame = +2

Query: 53  KEENEKKIPVFTVFKNNSILKNIFL-DAPPTPLKAXXXXXXXXXXXXIGRHPDCSITLDH 229
           + E EKKIPVFTV KN +ILKNIFL D PP    A            +GRHPDC+I L+H
Sbjct: 14  QSEEEKKIPVFTVLKNGAILKNIFLLDNPPATPVAITASQEFEEILVVGRHPDCNIVLEH 73

Query: 230 PSISRFHLRLISKPXXXXXXXXXXXXXXGTWVSGKKVEPGVQVTLNEGDTLRLGGSSRLY 409
           PSISRFHLR+ S P              G+W+SG K+EPGV+V L EGD ++LGGS R Y
Sbjct: 74  PSISRFHLRIHSNPSSHSLSVIDLSSVHGSWISGNKIEPGVRVELKEGDKMKLGGSRREY 133

Query: 410 VLHWVPVSRAYNLDDPFXXXXXXXXXXKESEELTNQDGN-FCSSIETSQVQSLCVNSEDM 586
           +LHW+P+SRAY+L++PF          KE +E  +QD N F    E   +    V  +D 
Sbjct: 134 MLHWIPISRAYDLENPFVAPLGEAEPFKEMDEKEHQDENGFALQNEGDDL----VQDQDS 189

Query: 587 DLSISKKDVKV---SPSAPPMLXXXXXXXXXXXXAKTGNLIREEHKQNEV 727
             S S     +   +PSAPPM              +  N + + H ++E+
Sbjct: 190 SFSCSSLFPYITCPTPSAPPMPEEMKSSFPYGDEEENINPLEKIHGESEI 239


>gb|AED89985.1| PSL1b [Solanum chacoense x Solanum tuberosum]
          Length = 592

 Score =  159 bits (403), Expect = 5e-37
 Identities = 90/201 (44%), Positives = 114/201 (56%), Gaps = 5/201 (2%)
 Frame = +2

Query: 53  KEENEKKIPVFTVFKNNSILKNIFL-DAPPTPLKAXXXXXXXXXXXXIGRHPDCSITLDH 229
           + E EKKIPVFTV KN +ILKNIFL D PP    A            +GRHPDC+I L+H
Sbjct: 14  QSEEEKKIPVFTVLKNGAILKNIFLLDNPPATPVAITANQEFEEILVVGRHPDCNIVLEH 73

Query: 230 PSISRFHLRLISKPXXXXXXXXXXXXXXGTWVSGKKVEPGVQVTLNEGDTLRLGGSSRLY 409
           PSISRFHLR+ S P              G+W+SG K+EP V+V L EGD ++LGGS R Y
Sbjct: 74  PSISRFHLRIHSNPSSHSLSVIDLSSVHGSWISGNKIEPQVRVELKEGDKMKLGGSRREY 133

Query: 410 VLHWVPVSRAYNLDDPFXXXXXXXXXXKESEELTNQDGN-FCSSIETSQVQSLCVNSEDM 586
           +LHW+P+SRAY+L++PF          KE +   +QD N F    E   +    V  +D 
Sbjct: 134 MLHWIPISRAYDLENPFVAPLGEAEPFKEMDGKEHQDENGFALQNEGGDL----VQDQDS 189

Query: 587 DLSISKKDVKV---SPSAPPM 640
             S S     +   +PSAPPM
Sbjct: 190 SFSCSSLLPYIKCPTPSAPPM 210


>gb|AED89984.1| PSL1a [Solanum chacoense x Solanum tuberosum]
          Length = 823

 Score =  159 bits (403), Expect = 5e-37
 Identities = 90/201 (44%), Positives = 114/201 (56%), Gaps = 5/201 (2%)
 Frame = +2

Query: 53  KEENEKKIPVFTVFKNNSILKNIFL-DAPPTPLKAXXXXXXXXXXXXIGRHPDCSITLDH 229
           + E EKKIPVFTV KN +ILKNIFL D PP    A            +GRHPDC+I L+H
Sbjct: 14  QSEEEKKIPVFTVLKNGAILKNIFLLDNPPATPVAITANQEFEEILVVGRHPDCNIVLEH 73

Query: 230 PSISRFHLRLISKPXXXXXXXXXXXXXXGTWVSGKKVEPGVQVTLNEGDTLRLGGSSRLY 409
           PSISRFHLR+ S P              G+W+SG K+EP V+V L EGD ++LGGS R Y
Sbjct: 74  PSISRFHLRIHSNPSSHSLSVIDLSSVHGSWISGNKIEPQVRVELKEGDKMKLGGSRREY 133

Query: 410 VLHWVPVSRAYNLDDPFXXXXXXXXXXKESEELTNQDGN-FCSSIETSQVQSLCVNSEDM 586
           +LHW+P+SRAY+L++PF          KE +   +QD N F    E   +    V  +D 
Sbjct: 134 MLHWIPISRAYDLENPFVAPLGEAEPFKEMDGKEHQDENGFALQNEGGDL----VQDQDS 189

Query: 587 DLSISKKDVKV---SPSAPPM 640
             S S     +   +PSAPPM
Sbjct: 190 SFSCSSLLPYIKCPTPSAPPM 210


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