BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005350
         (1975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001059088.1| Os07g0190600 [Oryza sativa Japonica Group] g...    86   4e-14
ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding sub...    75   8e-11
gb|EEC82987.1| hypothetical protein OsI_28022 [Oryza sativa Indi...    68   1e-08
ref|XP_003619415.1| Coiled-coil domain-containing protein [Medic...    65   5e-08
ref|XP_003616287.1| Replication factor A protein [Medicago trunc...    65   5e-08

>ref|NP_001059088.1| Os07g0190600 [Oryza sativa Japonica Group]
            gi|34394551|dbj|BAC83855.1| DNA binding protein-like
            [Oryza sativa Japonica Group]
            gi|113610624|dbj|BAF21002.1| Os07g0190600 [Oryza sativa
            Japonica Group]
          Length = 544

 Score = 85.9 bits (211), Expect = 4e-14
 Identities = 106/499 (21%), Positives = 190/499 (38%), Gaps = 28/499 (5%)
 Frame = -1

Query: 1798 YDKLQNLKIEKTEWTVRVRAQAIW--KGINRETQEFKGLNVIFIDDSNSSIHAFVSAKIC 1625
            Y  L  +   +  W ++VR    W   G ++  ++F  L +I +D+    I A V     
Sbjct: 3    YSLLSQINSTRHNWRIKVRVARSWHLSGTSKR-RDFTALELILVDEEGVGITACVGENEI 61

Query: 1624 DLFDETLKEGHIYSLSNFHVRLYGEDEKNRAVRFKKHIYFANHTKLKXXXENLTKIAPL- 1448
              F  ++ EGH Y L NF  R+  + +K  AV     I+F   T ++     ++   PL 
Sbjct: 62   QKFSTSIVEGHAYFLRNF--RVSRQTKKLNAVPSTYAIFFTPWTIVEEIPTEISGSLPLY 119

Query: 1447 AFDLFDLHVVDKFVTDPRFLIXXXXXXXXXXXXXXXDVVG-------IIQDRNINCVYSK 1289
             F+  D   +D+    P  L+               DV+G       ++Q   +N    +
Sbjct: 120  IFNFVDFEDLDERARHPNGLV---------------DVIGQLTVVHPLVQSNGLNGPSVR 164

Query: 1288 DDESKSHIRFKMTDGRYTLNVTFFNAFGKEF--EKALKDIVEEPIVIVIASSKVNLHEGA 1115
             +     +  ++ +   TL      +F  EF  E   KD   EP++IV A   + L  GA
Sbjct: 165  RNVELRDLSDRLLE--ITLWAEHATSFEDEFLIETIGKD---EPVIIVFAGLNMKLFSGA 219

Query: 1114 PCLNNYPATRFYLNIDHYCVKQLKDMMLQNSICINPVXXXXXXXTPI-------LSVAEI 956
            P   +  AT++Y+NID   +   +  +      +  V                  S++E+
Sbjct: 220  PSCRSSAATKWYINIDIPEINAFRTSLQGRGCEVLLVPSDGAALGAANEADANRKSISEL 279

Query: 955  KKLT-KDYIEKKVRCQITVKKVEDMNNWYDYVCTSCEKEVNKVEGRYRCDPCKRNIPYPD 779
              L   D  + +  C   +K+++  + W+   C+ C K V      + C  C    P   
Sbjct: 280  LSLNPHDNNDVRFTCDARIKEIDVSSGWWYKACSICRKGVKPTLQGFECVNCDNTEPIIT 339

Query: 778  KRFRLATVCNDSTGILPIVFPDDEIQRITGKNAFXXXXXXXXXXXXIPFPPTLKSFERKQ 599
              ++L  V  D+T    I       +++  + A             +P P  L++   ++
Sbjct: 340  PSYKLNVVIEDNTDRAKIFMFGGMAEQVVRRTAADLVEESSANQLLLPSP--LRALIGRR 397

Query: 598  YIVTLKIMDKNVNKSCNIYTATEINDPVEMLGNHNPYEAETVKNKDNSICIETLA--SHD 425
            ++  + I ++        +   ++ +P  + G +N   A       NS+   TLA  S  
Sbjct: 398  FVFQIVISEQTFRTGQLCFQVRKVFNPPPIDGQNNGVHA----TLGNSLSHATLARTSGA 453

Query: 424  SKHSPPT------GKCSNK 386
             K   PT      G  SNK
Sbjct: 454  QKKCDPTPLMEASGSSSNK 472


>ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355484558|gb|AES65761.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 549

 Score = 74.7 bits (182), Expect = 8e-11
 Identities = 81/415 (19%), Positives = 153/415 (36%), Gaps = 12/415 (2%)
 Frame = -1

Query: 1801 RYDKLQNLKIEKTEWTVRVRAQAIWKGINRETQEFK-GLNVIFIDDSNSSIHAFVSAKIC 1625
            + D + ++   K  W +RVR   +W   + +  +    L ++ +D+    I+A V   + 
Sbjct: 4    KIDLISDISPSKENWNIRVRVVRLWFVRDMKKDQLPYSLEMVLMDNKGDRINASVRRTLI 63

Query: 1624 DLFDETLKEGHIYSLSNFHVRLYGEDEKNRAVRFKKHIYFANHTKLKXXXENLTKIAPL- 1448
              +++ L+E  ++S+ NF V         R  R    I F   TK+K   +   K  P  
Sbjct: 64   YKYEKELREDRVFSIGNFSVA--SNVGSYRTARHPYKINFQYGTKIKQCDD---KFVPAD 118

Query: 1447 AFDLFDLHVVDKFVTDPRFLIXXXXXXXXXXXXXXXDVVGIIQDRNINCVYSKDDESKSH 1268
             + + D   + +   D  +LI               DV+G+++   +   Y+++      
Sbjct: 119  IYVIGDSREIFQSEYDTDYLI---------------DVMGMLKAVGVEKSYTRNGSQSKM 163

Query: 1267 IRFKMTDGRYTLNVTFFNAFGKEFEKALKDIVEEPIVIVIASSKVNLHEG-APCLNNYPA 1091
            I  ++    +   VT F  +  E    L     E +V+ +  +K+ + +G A   N   A
Sbjct: 164  IPIELDYDGFRFKVTLFGPYVDELNAFLASGETENVVVAVLLTKIKIFQGQATIQNTINA 223

Query: 1090 TRFYLNIDHYCVKQLKDMMLQNSICINPVXXXXXXXTPILSVAEIKKLT--------KDY 935
            T+   N        LK  M++N    +P        + +    +   L+        KD 
Sbjct: 224  TKVLFNPTFTAALLLKKRMVENDDSPSPGISKITEASKVSVEEDFLNLSPMTTVEGLKDC 283

Query: 934  IEKKVRCQI-TVKKVEDMNNWYDYVCTSCEKEVNKVEGRYRCDPCKRNIPYPDKRFRLAT 758
             E+K      TV  + D ++W+   C  C K+V   E  Y C  C +++     R+ +  
Sbjct: 284  AEEKCFAVFGTVNVIVDDSDWWYTSCVVCNKKVYPDEKMYFCSKCNKHVLNVTPRYMIKM 343

Query: 757  VCNDSTGILPIVFPDDEIQRITGKNAFXXXXXXXXXXXXIPFPPTLKSFERKQYI 593
               D T     V  D +   +  K                  P  + +   K Y+
Sbjct: 344  RVVDHTDSATFVLFDRDAAELFKKTCADMIESCGMGTDASEVPKDILAMVEKSYL 398


>gb|EEC82987.1| hypothetical protein OsI_28022 [Oryza sativa Indica Group]
          Length = 705

 Score = 67.8 bits (164), Expect = 1e-08
 Identities = 80/361 (22%), Positives = 139/361 (38%), Gaps = 21/361 (5%)
 Frame = -1

Query: 1798 YDKLQNLKIEKTEWTVRVRAQAIWKGINRETQEFKGLNVIFIDDSNSSIHAFVSAKICDL 1619
            Y K+  L  +   W+++ +   +W  +N  T E    +++ +D+   +IHA +   + D 
Sbjct: 3    YKKISELTTKGQTWSIKAKILRMWDSVNFATDEIMSFDMLLMDEEGETIHATIWKNLIDN 62

Query: 1618 FDETLKEGHIYSLSNFHVRLYGEDEKNRAVRFKKHIYFANHTKLKXXXENLTKIAPLAFD 1439
            F   + E  IY+ SNF V+   E  K   V     I F  +TK+K       K     F+
Sbjct: 63   FRPMISENSIYAFSNFKVQ---ESTKYCPVDKDLKITFMYNTKVKEMKGASNKFKEYYFE 119

Query: 1438 LFDLHVVDKFVTDPRFLIXXXXXXXXXXXXXXXDVVGI------IQDRNI--NCVYSKDD 1283
                  +   V   + L                DV+G+      I+ R I  N    +  
Sbjct: 120  FATRETLVDRVNKDKIL---------------SDVIGLLTKIKPIESRMIMKNSTNPRPK 164

Query: 1282 ESKSHIRFKMTDGRYTLNVTFFNAFGKEFEKALKDIVEEPIVIVIASSKVNLHEGAPCLN 1103
            + +  I   + DG   + VT    +G+      +D++    V+V+ S+ V    G   L 
Sbjct: 165  DIR-EIELLLLDGA-KIRVTL---WGQLAHSLNEDVIGNHTVVVVTSTTVQEFNGL-SLR 218

Query: 1102 NYPATRFYLNID----------HYCVKQLKDMMLQNSICINPVXXXXXXXTPILSVAEIK 953
            +  ATR Y +I+          H   + L  +M  +      +          L   EI 
Sbjct: 219  SSSATRLYTDINIPETWKIISRHSDEQNLPKLMEVDKSTQGTLEEQMFYNRKTLQ--EIT 276

Query: 952  KLTKDYIEKK---VRCQITVKKVEDMNNWYDYVCTSCEKEVNKVEGRYRCDPCKRNIPYP 782
             +  D  + +      + T+  ++D+  WY   C  C K+V K   +Y C+ CK    YP
Sbjct: 277  NMGHDDTKSQDFICTTKATIDHLQDVTWWY-MSCNDCNKKVVKKIDKYYCEKCKM---YP 332

Query: 781  D 779
            +
Sbjct: 333  E 333


>ref|XP_003619415.1| Coiled-coil domain-containing protein [Medicago truncatula]
            gi|355494430|gb|AES75633.1| Coiled-coil domain-containing
            protein [Medicago truncatula]
          Length = 705

 Score = 65.5 bits (158), Expect = 5e-08
 Identities = 60/235 (25%), Positives = 93/235 (39%), Gaps = 6/235 (2%)
 Frame = -1

Query: 1759 WTVRVRAQAIWKGINRETQEFKGLNVIFIDDSNSSIHAFVSAKICDLFDETLKEGHIYSL 1580
            W   VR   +W     E   F  + ++ ID +   IHA +  ++  LF   L EG +Y L
Sbjct: 20   WRFVVRVIRLW-----EVPLFTSIEMVLIDQNGVKIHATIPKQLMYLFQHKLIEGKVYKL 74

Query: 1579 SNFHVRLYGEDEKNRAVRFKKHIY---FANHTKL-KXXXENLTKIAPLAFDLFDLHVVDK 1412
            SNF V L      + A R   H Y   F   TK+ +     ++ I      L D+  +  
Sbjct: 75   SNFTVLL-----NSGAYRTTHHTYKLIFQMKTKVEESHDYEISLIPNHGLTLTDISQITS 129

Query: 1411 FVTDPRFLIXXXXXXXXXXXXXXXDVVGIIQDRNINCVYSKDDESKSHIRFKMTDGRYTL 1232
               D  +L+               DV+G++   +    + +D +    +  ++TD     
Sbjct: 130  RTQDYEYLV---------------DVIGLMTGISAEREFVRDGKLTKILVIELTDHSGKC 174

Query: 1231 NVTFFNAFGKEFEKALKDIVEEPIVIVIASSKVNLHEGAPCLNNY--PATRFYLN 1073
              T F  +  E  K +   VE   VIVI  +KV +  G   + N     TR YLN
Sbjct: 175  ECTLFGNYVDELHKLMSKAVEGSPVIVIQFAKVKIFRGKASIQNVVGSTTRIYLN 229


>ref|XP_003616287.1| Replication factor A protein [Medicago truncatula]
            gi|355517622|gb|AES99245.1| Replication factor A protein
            [Medicago truncatula]
          Length = 517

 Score = 65.5 bits (158), Expect = 5e-08
 Identities = 71/378 (18%), Positives = 145/378 (38%), Gaps = 10/378 (2%)
 Frame = -1

Query: 1798 YDKLQNLKIEKTEWTVRVRAQAIWKGIN-RETQEFKGLNVIFIDDSNSSIHAFVSAKICD 1622
            +  +  + + +  W ++VR   +W+  +  +  +   L ++ ID+  + IHA V  ++  
Sbjct: 5    FHSVSEIALGEDGWKIKVRVLRLWEVPSFLKPDQTNSLEMVLIDEMGTKIHASVRKQLFY 64

Query: 1621 LFDETLKEGHIYSLSNFHVRLYGEDEKNRAVRFKKHIYFANHTKLKXXXENLTKIAPLAF 1442
            +F   L EG +Y +S F V       +     +K  I F   TK++        I  L  
Sbjct: 65   VFQSKLSEGKVYEMSCFSVAPSVGSYRTTLHPYK--IVFQMTTKVQACEG--ASIPSLGI 120

Query: 1441 DLFDLHVVDKFVTDPRFLIXXXXXXXXXXXXXXXDVVGIIQDRNINCVYSKDDESKSHIR 1262
             L  +  V +  +D  +L+               DV+G +   ++   Y +D +    + 
Sbjct: 121  SLCKIADVCQHTSDHDYLV---------------DVLGFMTGISVEREYVRDGKVTKMVI 165

Query: 1261 FKMTDGRYTLNVTFFNAFGKEFEKALKDIVEEPIVIVIASSKVNLHEGAPCLNN-YPATR 1085
            F++TD         F  +     K +        +I++  +KV +      L N    TR
Sbjct: 166  FEITDASGKCECALFGQYVDTLNKLMGKSGGGMPIILVQFAKVKIFRDKASLQNVMNTTR 225

Query: 1084 FYLNIDHYCVKQLKDMMLQNSICINPVXXXXXXXTPILSVAEIKKLTKDYIEK------- 926
              +N       Q++  +   S+ ++ V          L    ++   K  +E+       
Sbjct: 226  ILINPPIEQADQIRKSVTFGSMDVSSVPRIGARSKVSLEEDFLRTFPKKTLEQLHSTFED 285

Query: 925  -KVRCQITVKKVEDMNNWYDYVCTSCEKEVNKVEGRYRCDPCKRNIPYPDKRFRLATVCN 749
                   T+  + D  +W+ Y    C + V+   G + C  C +++     RFR+    +
Sbjct: 286  GVFVVYATIGGLVDHEDWW-YPACKCHRSVSADSGAFYCKGCAKHVFQMVPRFRVKVNVS 344

Query: 748  DSTGILPIVFPDDEIQRI 695
            D+T +   V  D ++Q +
Sbjct: 345  DATNVGVFVVFDGDMQNL 362