BLASTX nr result

ID: Bupleurum21_contig00005342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005342
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631984.1| PREDICTED: uncharacterized protein LOC100854...    67   1e-09
ref|XP_002311840.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_002517185.1| conserved hypothetical protein [Ricinus comm...    56   4e-06

>ref|XP_003631984.1| PREDICTED: uncharacterized protein LOC100854649 [Vitis vinifera]
           gi|297736998|emb|CBI26199.3| unnamed protein product
           [Vitis vinifera]
          Length = 118

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/74 (52%), Positives = 53/74 (71%)
 Frame = +3

Query: 3   VIHPRAAIQSQMFYEQSCKTEQSKGTGVFIPRSTQPRRKNKQAKFTTTPSNTKFQRLSDA 182
           VIHP  + Q  + ++Q+C+ E SKGTGVFIPRS+QPRRKN+Q +F +  SNTK QR  D 
Sbjct: 46  VIHP--STQYPILHDQNCRRE-SKGTGVFIPRSSQPRRKNRQGRFNS--SNTKSQRQPD- 99

Query: 183 NSRGLSQGLASNNY 224
           N+RG+S     N++
Sbjct: 100 NTRGVSHLSYKNSF 113


>ref|XP_002311840.1| predicted protein [Populus trichocarpa] gi|222851660|gb|EEE89207.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/67 (43%), Positives = 43/67 (64%)
 Frame = +3

Query: 30  SQMFYEQSCKTEQSKGTGVFIPRSTQPRRKNKQAKFTTTPSNTKFQRLSDANSRGLSQGL 209
           S   YEQ+C+ E  KGTGVFIP+S+QPRRK++Q +++   +N +       N+R +SQ  
Sbjct: 49  SHSMYEQNCRRESCKGTGVFIPKSSQPRRKHRQGRYSQKSNNRQHD-----NTRVVSQVS 103

Query: 210 ASNNYTS 230
            SN + S
Sbjct: 104 YSNAFKS 110


>ref|XP_002517185.1| conserved hypothetical protein [Ricinus communis]
           gi|223543820|gb|EEF45348.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 95

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 34/71 (47%), Positives = 46/71 (64%)
 Frame = +3

Query: 9   HPRAAIQSQMFYEQSCKTEQSKGTGVFIPRSTQPRRKNKQAKFTTTPSNTKFQRLSDANS 188
           HP A   S   YEQ+C+ E SKGTGVFIPRS+QPRRK++Q + ++  S T  Q  S   +
Sbjct: 24  HPTAP--SSYTYEQTCRRE-SKGTGVFIPRSSQPRRKHRQGRHSSFNSKTNRQHDS---T 77

Query: 189 RGLSQGLASNN 221
           R +S  ++ NN
Sbjct: 78  RMVSHQVSHNN 88


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