BLASTX nr result

ID: Bupleurum21_contig00005333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005333
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB02733.1| transposase-like protein [Arabidopsis thaliana]        96   2e-18
dbj|BAB02729.1| unnamed protein product [Arabidopsis thaliana]         89   5e-16
ref|NP_001136571.1| uncharacterized protein LOC100216693 [Zea ma...    84   9e-15
dbj|BAK01733.1| predicted protein [Hordeum vulgare subsp. vulgare]     82   6e-14
gb|ACN26356.1| unknown [Zea mays]                                      80   1e-13

>dbj|BAB02733.1| transposase-like protein [Arabidopsis thaliana]
          Length = 554

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/119 (39%), Positives = 77/119 (64%), Gaps = 3/119 (2%)
 Frame = -1

Query: 370 LRYVCRLVEYINNAAEVLFMTKNPTACIYVYNLGELQASLRKESLNPDR---LSLVTDLL 200
           ++  C+L   I   A+ LF  + PT+ +Y + L EL+  L KE  N D    LS   +++
Sbjct: 282 IKTFCKLAGCIYKVAKELFDGEYPTSNVYFHLLAELKVMLNKELKNGDNDYFLSKAKEIV 341

Query: 199 EKFDEYWNDMFLVLAIATVMDPRYKMKYIEFFSLKYEDTSGNSQVKTVLEAIQGLYDDY 23
           ++FD+YWNDMFLV+A A+V+DPR+K+ Y++F+  K E +   S+ +TV++ ++GLY  Y
Sbjct: 342 KRFDKYWNDMFLVMATASVLDPRFKLNYLQFYCSKNEVSDDGSKAETVVDYLRGLYARY 400


>dbj|BAB02729.1| unnamed protein product [Arabidopsis thaliana]
          Length = 579

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/115 (40%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
 Frame = -1

Query: 358 CRLVEYINNAAEVLFMTKNPTACIYVYNLGELQASLRKESLNPDR---LSLVTDLLEKFD 188
           C+L + I   A+ LF  +  T+ +Y + L EL+  L +E  + D    L     +LE+FD
Sbjct: 288 CKLTDCIYKVAKELFEGEYSTSNVYFHLLAELKVMLNQELPSADSDYFLCKAKQILERFD 347

Query: 187 EYWNDMFLVLAIATVMDPRYKMKYIEFFSLKYEDTSGNSQVKTVLEAIQGLYDDY 23
           +YWN+MFLVLA A+V+DPR+KM Y+EF+  K E     S+  TVL+ ++ LY  Y
Sbjct: 348 KYWNNMFLVLATASVLDPRFKMNYLEFYCSKKEVNVEGSKAATVLDYLRNLYARY 402


>ref|NP_001136571.1| uncharacterized protein LOC100216693 [Zea mays]
           gi|194696216|gb|ACF82192.1| unknown [Zea mays]
          Length = 503

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
 Frame = -1

Query: 358 CRLVEYINNAAEVLFMTKNPTACIYVYNLGELQASLRKESLNPDRL--SLVTDLLEKFDE 185
           C  ++ + ++A  +    NPTA I+ +   +LQ  L   + + D    S+  D+ E+FD+
Sbjct: 238 CNYLKLLYDSAHSIMAAANPTANIFFHEAWKLQLELANGTGHEDPTFRSIAKDMHERFDK 297

Query: 184 YWNDMFLVLAIATVMDPRYKMKYIEFFSLKYEDTSGNSQVKTVLEAIQGLYDDYKMHSL 8
           YW D  LVLA+A VMDPR+KMK +EF   K         VK V +A+  LY++Y  H L
Sbjct: 298 YWKDCSLVLAVAVVMDPRFKMKLVEFSYTKIYGAEAAKHVKVVNDAVHELYEEYVAHPL 356


>dbj|BAK01733.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 727

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
 Frame = -1

Query: 358 CRLVEYINNAAEVLFMTKNPTACIYVYNLGELQASLRKESLNPDRL--SLVTDLLEKFDE 185
           C  +  + ++A  +    NPT+ I+ +   +LQ  L   S + D +  S+  D+ EKFD+
Sbjct: 454 CNYLRLLYDSAHSIMAAGNPTSNIFFHEAWKLQLELANASAHEDPIFSSVAKDMYEKFDK 513

Query: 184 YWNDMFLVLAIATVMDPRYKMKYIEFFSLKYEDTSGNSQVKTVLEAIQGLYDDY 23
           YW D  LVLA+A VMDPR+KMK +EF   K         VK V +++  L+ DY
Sbjct: 514 YWKDCNLVLAVAVVMDPRFKMKLVEFSYSKIYGVEAAKYVKVVNDSVHDLFKDY 567


>gb|ACN26356.1| unknown [Zea mays]
          Length = 510

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
 Frame = -1

Query: 358 CRLVEYINNAAEVLFMTKNPTACIYVYNLGELQASLRK--ESLNPDRLSLVTDLLEKFDE 185
           C  ++ + ++A  +  + NPTA I+ +   ++Q  L    E  NP   S+  D+ E+FD+
Sbjct: 238 CNYLKLLYDSAHSVMASANPTANIFFHEAWKIQLELANGTEHENPIFSSIAKDMHERFDK 297

Query: 184 YWNDMFLVLAIATVMDPRYKMKYIEFFSLKYEDTSGNSQVKTVLEAIQGLYDDY 23
           YW D  LVLAIA VMDPR+KMK +EF   K         VK V +++  LY +Y
Sbjct: 298 YWKDCSLVLAIAVVMDPRFKMKLVEFSYSKIYGAEAMKYVKVVNDSLHELYKEY 351


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