BLASTX nr result

ID: Bupleurum21_contig00005317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005317
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144741.1| PREDICTED: trafficking protein particle comp...   273   3e-71
ref|XP_002281149.1| PREDICTED: trafficking protein particle comp...   271   2e-70
gb|AFK42150.1| unknown [Medicago truncatula]                          270   3e-70
ref|XP_003630811.1| Trafficking protein particle complex subunit...   270   3e-70
gb|AFK41770.1| unknown [Lotus japonicus]                              268   8e-70

>ref|XP_004144741.1| PREDICTED: trafficking protein particle complex subunit 4-like
           [Cucumis sativus] gi|449490796|ref|XP_004158709.1|
           PREDICTED: trafficking protein particle complex subunit
           4-like [Cucumis sativus]
          Length = 141

 Score =  273 bits (698), Expect = 3e-71
 Identities = 131/141 (92%), Positives = 139/141 (98%)
 Frame = -1

Query: 701 MPAIYSLYIINKSGGLIYYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPVAGCSGIE 522
           M AIYSLYIINKSGGLI+YKDYGSAGRMDTNDSLR+ASLWHSMHAISQQLSP+AGCSG+E
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60

Query: 521 LLEADTFDLHCFQSLTGTKFFVVAEPGTQNMESLLKHIYELYTDYVLKNPFYEMEMPIRC 342
           LLEADTFDLHCFQSLTGTKFFVV EPGTQ+MESLLK+IYELYTD+VLKNPFYEMEMPIRC
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120

Query: 341 ELFDINLSQAVQKDRVALLGR 279
           ELFDINL+QAVQKDRVALLGR
Sbjct: 121 ELFDINLAQAVQKDRVALLGR 141


>ref|XP_002281149.1| PREDICTED: trafficking protein particle complex subunit 4 [Vitis
           vinifera] gi|147807581|emb|CAN66318.1| hypothetical
           protein VITISV_040622 [Vitis vinifera]
           gi|296089818|emb|CBI39637.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score =  271 bits (692), Expect = 2e-70
 Identities = 133/141 (94%), Positives = 135/141 (95%)
 Frame = -1

Query: 701 MPAIYSLYIINKSGGLIYYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPVAGCSGIE 522
           M AIYSLYIINKSGGLI+YKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSP  GCSGIE
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPTLGCSGIE 60

Query: 521 LLEADTFDLHCFQSLTGTKFFVVAEPGTQNMESLLKHIYELYTDYVLKNPFYEMEMPIRC 342
           LLEADTFDLHCFQSLTGTKFFVV EPGTQ+ME LLK IYELYTDYVLKNPFYEMEMPIRC
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKVIYELYTDYVLKNPFYEMEMPIRC 120

Query: 341 ELFDINLSQAVQKDRVALLGR 279
           ELFDINLSQAVQKDRVALLGR
Sbjct: 121 ELFDINLSQAVQKDRVALLGR 141


>gb|AFK42150.1| unknown [Medicago truncatula]
          Length = 141

 Score =  270 bits (690), Expect = 3e-70
 Identities = 129/141 (91%), Positives = 137/141 (97%)
 Frame = -1

Query: 701 MPAIYSLYIINKSGGLIYYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPVAGCSGIE 522
           M A+YSLYIINKSGGLIYYKDYGS+GRMDTNDSLR+ASLWHSMHAISQQLSPV+GC+GIE
Sbjct: 1   MAAVYSLYIINKSGGLIYYKDYGSSGRMDTNDSLRVASLWHSMHAISQQLSPVSGCTGIE 60

Query: 521 LLEADTFDLHCFQSLTGTKFFVVAEPGTQNMESLLKHIYELYTDYVLKNPFYEMEMPIRC 342
           LL+ADTFDLHCFQSLTGTKFFVV EPGTQ MESLLK +YELYTDYVLKNPFYEMEMPIRC
Sbjct: 61  LLQADTFDLHCFQSLTGTKFFVVCEPGTQQMESLLKFVYELYTDYVLKNPFYEMEMPIRC 120

Query: 341 ELFDINLSQAVQKDRVALLGR 279
           ELFDINL+QAVQKDRVALLGR
Sbjct: 121 ELFDINLAQAVQKDRVALLGR 141


>ref|XP_003630811.1| Trafficking protein particle complex subunit [Medicago truncatula]
           gi|355524833|gb|AET05287.1| Trafficking protein particle
           complex subunit [Medicago truncatula]
          Length = 213

 Score =  270 bits (690), Expect = 3e-70
 Identities = 129/141 (91%), Positives = 137/141 (97%)
 Frame = -1

Query: 701 MPAIYSLYIINKSGGLIYYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPVAGCSGIE 522
           M A+YSLYIINKSGGLIYYKDYGS+GRMDTNDSLR+ASLWHSMHAISQQLSPV+GC+GIE
Sbjct: 73  MAAVYSLYIINKSGGLIYYKDYGSSGRMDTNDSLRVASLWHSMHAISQQLSPVSGCTGIE 132

Query: 521 LLEADTFDLHCFQSLTGTKFFVVAEPGTQNMESLLKHIYELYTDYVLKNPFYEMEMPIRC 342
           LL+ADTFDLHCFQSLTGTKFFVV EPGTQ MESLLK +YELYTDYVLKNPFYEMEMPIRC
Sbjct: 133 LLQADTFDLHCFQSLTGTKFFVVCEPGTQQMESLLKFVYELYTDYVLKNPFYEMEMPIRC 192

Query: 341 ELFDINLSQAVQKDRVALLGR 279
           ELFDINL+QAVQKDRVALLGR
Sbjct: 193 ELFDINLAQAVQKDRVALLGR 213


>gb|AFK41770.1| unknown [Lotus japonicus]
          Length = 141

 Score =  268 bits (686), Expect = 8e-70
 Identities = 129/141 (91%), Positives = 137/141 (97%)
 Frame = -1

Query: 701 MPAIYSLYIINKSGGLIYYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPVAGCSGIE 522
           M AIYSLYIINKSGGLIYYKDYGSAGRMDTND+LR+ASLWHSMHAISQQLSPV+GC+GIE
Sbjct: 1   MAAIYSLYIINKSGGLIYYKDYGSAGRMDTNDTLRVASLWHSMHAISQQLSPVSGCAGIE 60

Query: 521 LLEADTFDLHCFQSLTGTKFFVVAEPGTQNMESLLKHIYELYTDYVLKNPFYEMEMPIRC 342
           LL+ADTFDLHCFQSLTGTKFFVV+EPGTQ MESLLK +YELYTDYVLKNPFYEMEMPIRC
Sbjct: 61  LLQADTFDLHCFQSLTGTKFFVVSEPGTQQMESLLKFVYELYTDYVLKNPFYEMEMPIRC 120

Query: 341 ELFDINLSQAVQKDRVALLGR 279
           ELFDINL+QAVQKDRVALL R
Sbjct: 121 ELFDINLTQAVQKDRVALLAR 141


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