BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005302
         (881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein ...   133   2e-32
ref|XP_003625508.1| RNA binding protein [Medicago truncatula] gi...   125   3e-31
gb|AFK47684.1| unknown [Lotus japonicus]                              117   5e-29
ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycin...   117   1e-28
ref|XP_004142081.1| PREDICTED: glycine-rich RNA-binding protein ...   124   4e-28

>ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
           gi|297741476|emb|CBI32608.3| unnamed protein product
           [Vitis vinifera]
          Length = 140

 Score =  133 bits (335), Expect(2) = 2e-32
 Identities = 68/101 (67%), Positives = 81/101 (80%)
 Frame = -1

Query: 773 MAFTGAFRRVIGSSSTISAKRPSQLPFLRLNSTLTTPKLFISGLSRMTTNEKLTEAFAPF 594
           MAF  +FRRV+  SSTI     SQ    R NST+T+PKLF+SGLSR+TT+EKL EAF+PF
Sbjct: 1   MAFASSFRRVLTGSSTILQ---SQFSPARFNSTVTSPKLFVSGLSRLTTDEKLKEAFSPF 57

Query: 593 GNLVEAKVVVDRACGRSKGFGFVTYASIEDAEKAREGMNAK 471
           G L+EAKV+ DR  GRSKGFGFVTY ++E+AEKAREGMNAK
Sbjct: 58  GQLLEAKVITDRVSGRSKGFGFVTYTTLEEAEKAREGMNAK 98



 Score = 32.7 bits (73), Expect(2) = 2e-32
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -3

Query: 357 EQRPSNTGYTSNKTIGWCG 301
           E   S TG+ +NKTIGWCG
Sbjct: 122 EPESSETGFRTNKTIGWCG 140


>ref|XP_003625508.1| RNA binding protein [Medicago truncatula]
           gi|355500523|gb|AES81726.1| RNA binding protein
           [Medicago truncatula]
          Length = 141

 Score =  125 bits (315), Expect(2) = 3e-31
 Identities = 66/101 (65%), Positives = 79/101 (78%)
 Frame = -1

Query: 773 MAFTGAFRRVIGSSSTISAKRPSQLPFLRLNSTLTTPKLFISGLSRMTTNEKLTEAFAPF 594
           MAF   F R++  S   S    S    +RLNSTLT+PKLFISGLSR+TT+EKLTEAF+PF
Sbjct: 1   MAFFFGFHRLLRHSQ--SPLVSSHFTSIRLNSTLTSPKLFISGLSRLTTDEKLTEAFSPF 58

Query: 593 GNLVEAKVVVDRACGRSKGFGFVTYASIEDAEKAREGMNAK 471
           G L+EAKV+ DR  GRSKGF FV+Y++IE+AEKAREGMNAK
Sbjct: 59  GQLLEAKVITDRGSGRSKGFAFVSYSTIEEAEKAREGMNAK 99



 Score = 36.2 bits (82), Expect(2) = 3e-31
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = -3

Query: 357 EQRPSNTGYTSNKTIGWCG 301
           + +PS TG+T NKT+GWCG
Sbjct: 123 QSQPSQTGFTVNKTVGWCG 141


>gb|AFK47684.1| unknown [Lotus japonicus]
          Length = 138

 Score =  117 bits (293), Expect(2) = 5e-29
 Identities = 65/102 (63%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
 Frame = -1

Query: 773 MAFTGAFRRVIGSSSTISAKRPSQLPFLRL-NSTLTTPKLFISGLSRMTTNEKLTEAFAP 597
           MAF    +R +  SS         L  +RL ++TLTTPKLFISGLSR TT+ KL EAFAP
Sbjct: 1   MAFFSGVQRFLRQSS-------HNLTSVRLCSTTLTTPKLFISGLSRQTTDRKLNEAFAP 53

Query: 596 FGNLVEAKVVVDRACGRSKGFGFVTYASIEDAEKAREGMNAK 471
           FG L+EAKV+ DRA GRSKGFGFV+YASIE+AEKA +GMNAK
Sbjct: 54  FGQLIEAKVITDRASGRSKGFGFVSYASIEEAEKAGKGMNAK 95



 Score = 37.4 bits (85), Expect(2) = 5e-29
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = -3

Query: 354 QRPSNTGYTSNKTIGWCG 301
           Q+PS TG+T NKT+GWCG
Sbjct: 121 QQPSETGFTVNKTVGWCG 138


>ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycine max]
           gi|255628209|gb|ACU14449.1| unknown [Glycine max]
          Length = 139

 Score =  117 bits (293), Expect(2) = 1e-28
 Identities = 60/101 (59%), Positives = 77/101 (76%)
 Frame = -1

Query: 773 MAFTGAFRRVIGSSSTISAKRPSQLPFLRLNSTLTTPKLFISGLSRMTTNEKLTEAFAPF 594
           MAF    +R++  +  + +   S    +RL+STLT+PKLF+SGL R+T +EKL EAF+ F
Sbjct: 1   MAFMSGVQRLLRRTPLVHSHYAS----IRLSSTLTSPKLFVSGLCRLTIDEKLKEAFSSF 56

Query: 593 GNLVEAKVVVDRACGRSKGFGFVTYASIEDAEKAREGMNAK 471
           G LVEAKV++DRA GRSKGF FVTY +IE+AEKAREGMNAK
Sbjct: 57  GQLVEAKVIIDRASGRSKGFAFVTYTTIEEAEKAREGMNAK 97



 Score = 36.2 bits (82), Expect(2) = 1e-28
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = -3

Query: 357 EQRPSNTGYTSNKTIGWCG 301
           + +PS TG+T NKT+GWCG
Sbjct: 121 QSQPSETGFTVNKTVGWCG 139


>ref|XP_004142081.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus]
          Length = 146

 Score =  124 bits (310), Expect(2) = 4e-28
 Identities = 67/104 (64%), Positives = 81/104 (77%), Gaps = 3/104 (2%)
 Frame = -1

Query: 773 MAFTGAFRRVIGSSSTISAKRP---SQLPFLRLNSTLTTPKLFISGLSRMTTNEKLTEAF 603
           MAF    RRV+  SS+ S+      SQ   +RL+STLT+PKLFISGLSR+TT+EKL EAF
Sbjct: 1   MAFFSTVRRVLNGSSSSSSSSSILRSQWNAVRLSSTLTSPKLFISGLSRLTTDEKLREAF 60

Query: 602 APFGNLVEAKVVVDRACGRSKGFGFVTYASIEDAEKAREGMNAK 471
           + FG LV+AKVV DRA GRSKGF FVTY++I++AEKARE MNAK
Sbjct: 61  SSFGQLVDAKVVTDRATGRSKGFAFVTYSTIDEAEKAREEMNAK 104



 Score = 27.7 bits (60), Expect(2) = 4e-28
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 357 EQRPSNTGYTSNKTIGWCG 301
           +   S  G  +NKTIGWCG
Sbjct: 128 QSETSEFGIRTNKTIGWCG 146