BLASTX nr result

ID: Bupleurum21_contig00005300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005300
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135658.1| PREDICTED: uncharacterized protein LOC101217...   142   2e-32
ref|XP_002274439.1| PREDICTED: protein translocase subunit SecA ...   135   3e-30
ref|XP_002882386.1| hypothetical protein ARALYDRAFT_477772 [Arab...   131   6e-29
ref|XP_002319047.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|NP_187146.2| uncharacterized protein [Arabidopsis thaliana] ...   128   5e-28

>ref|XP_004135658.1| PREDICTED: uncharacterized protein LOC101217561 [Cucumis sativus]
           gi|449485804|ref|XP_004157278.1| PREDICTED:
           uncharacterized protein LOC101225513 [Cucumis sativus]
          Length = 234

 Score =  142 bits (359), Expect = 2e-32
 Identities = 73/100 (73%), Positives = 83/100 (83%)
 Frame = -2

Query: 308 LSQLQHRWISSTTQLNQSWMDKIKGVITGKKTEEASQSITAESFTLLRFADELQNARRLG 129
           L+ LQ R I STTQL+ SWMDKIKGVI+GKK       I++ESFTLLRFADEL+NARR+G
Sbjct: 37  LTLLQSRSIFSTTQLHGSWMDKIKGVISGKKNSTEGTDISSESFTLLRFADELKNARRVG 96

Query: 128 TFKQYIVGRSSEATYADAFEKQESIIRYLGVHDPTGENLQ 9
             KQYIVGRSSEAT+ADAFEKQE+IIRYLG  D TGEN+Q
Sbjct: 97  ALKQYIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQ 136


>ref|XP_002274439.1| PREDICTED: protein translocase subunit SecA 1-like [Vitis vinifera]
          Length = 227

 Score =  135 bits (340), Expect = 3e-30
 Identities = 73/113 (64%), Positives = 87/113 (76%)
 Frame = -2

Query: 347 SHSLVSYNFRQRNLSQLQHRWISSTTQLNQSWMDKIKGVITGKKTEEASQSITAESFTLL 168
           S S  SY++RQ  L   QHR I ST+ L+ SWMDKIKGV+TGKK     Q IT E FTLL
Sbjct: 23  SSSTFSYHYRQ--LPPSQHRSIFSTSHLDASWMDKIKGVLTGKKAAPDGQ-ITTEEFTLL 79

Query: 167 RFADELQNARRLGTFKQYIVGRSSEATYADAFEKQESIIRYLGVHDPTGENLQ 9
           RFA+EL+ AR  GTFK+++VGRSSEAT+ADAF KQE+IIRYLG  DP+G+NLQ
Sbjct: 80  RFANELKAARAAGTFKRFVVGRSSEATFADAFGKQEAIIRYLGRFDPSGDNLQ 132


>ref|XP_002882386.1| hypothetical protein ARALYDRAFT_477772 [Arabidopsis lyrata subsp.
           lyrata] gi|297328226|gb|EFH58645.1| hypothetical protein
           ARALYDRAFT_477772 [Arabidopsis lyrata subsp. lyrata]
          Length = 230

 Score =  131 bits (329), Expect = 6e-29
 Identities = 77/127 (60%), Positives = 89/127 (70%), Gaps = 7/127 (5%)
 Frame = -2

Query: 368 IFRTR---ILSHSLVSYNFRQRNLSQL---QHRWISSTTQLNQSWMDKIKGVITGKKTEE 207
           IFR R   I S S  +Y+  +     L   QHR I+ST  LN  WMD IKGV TG K   
Sbjct: 10  IFRLRPEPISSSSFSAYSLSRITGGALIPSQHRSITSTAPLN-GWMDSIKGVFTGNKDTP 68

Query: 206 ASQS-ITAESFTLLRFADELQNARRLGTFKQYIVGRSSEATYADAFEKQESIIRYLGVHD 30
             +S +  E+FTLLRFADEL+NARRLG FKQYIVGRSSEAT++DAFEKQE++IRYLG  D
Sbjct: 69  LEESNLPVEAFTLLRFADELKNARRLGKFKQYIVGRSSEATFSDAFEKQEAVIRYLGALD 128

Query: 29  PTGENLQ 9
            TGENLQ
Sbjct: 129 ATGENLQ 135


>ref|XP_002319047.1| predicted protein [Populus trichocarpa] gi|222857423|gb|EEE94970.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  129 bits (323), Expect = 3e-28
 Identities = 70/116 (60%), Positives = 85/116 (73%)
 Frame = -2

Query: 356 RILSHSLVSYNFRQRNLSQLQHRWISSTTQLNQSWMDKIKGVITGKKTEEASQSITAESF 177
           + LS   +SY+    +L   QHR ISST  ++ SWMD IKGV TGKK E      T ESF
Sbjct: 16  KFLSLCSLSYSHIDSHLITSQHRLISSTAPVS-SWMDTIKGVFTGKKAETED---TPESF 71

Query: 176 TLLRFADELQNARRLGTFKQYIVGRSSEATYADAFEKQESIIRYLGVHDPTGENLQ 9
           TLL FAD ++NARR+G+ KQ++VGRSSEAT++ AFEKQE+IIRYLG  DPTGENLQ
Sbjct: 72  TLLSFADGMKNARRVGSLKQFVVGRSSEATFSSAFEKQEAIIRYLGALDPTGENLQ 127


>ref|NP_187146.2| uncharacterized protein [Arabidopsis thaliana]
           gi|51969142|dbj|BAD43263.1| unknown protein [Arabidopsis
           thaliana] gi|332640643|gb|AEE74164.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 231

 Score =  128 bits (321), Expect = 5e-28
 Identities = 68/97 (70%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
 Frame = -2

Query: 296 QHRWISSTTQLNQSWMDKIKGVITGKKTEEASQS-ITAESFTLLRFADELQNARRLGTFK 120
           Q R I+ST  LN  WMD IKGV TG K     +S +  E+FTLLRFADEL+NARRLG FK
Sbjct: 41  QQRSITSTAPLN-GWMDSIKGVFTGNKDTPLEESNLPVEAFTLLRFADELKNARRLGKFK 99

Query: 119 QYIVGRSSEATYADAFEKQESIIRYLGVHDPTGENLQ 9
           QYIVGRSSEAT+ADAFEKQE++IRYLG  D TGENLQ
Sbjct: 100 QYIVGRSSEATFADAFEKQEAVIRYLGALDATGENLQ 136


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