BLASTX nr result

ID: Bupleurum21_contig00005295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005295
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526504.1| protein with unknown function [Ricinus commu...   250   2e-64
ref|NP_181989.1| Ras-related protein RABH1B [Arabidopsis thalian...   248   8e-64
ref|XP_002302484.1| predicted protein [Populus trichocarpa] gi|2...   248   8e-64
emb|CBI16724.3| unnamed protein product [Vitis vinifera]              248   1e-63
ref|XP_002266653.1| PREDICTED: ras-related protein RABH1b [Vitis...   248   1e-63

>ref|XP_002526504.1| protein with unknown function [Ricinus communis]
           gi|223534179|gb|EEF35895.1| protein with unknown
           function [Ricinus communis]
          Length = 208

 Score =  250 bits (638), Expect = 2e-64
 Identities = 134/152 (88%), Positives = 137/152 (90%), Gaps = 1/152 (0%)
 Frame = -2

Query: 677 TVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTVKWIEEVRSERGNDVI 498
           TVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNT KWIEEVR+ERG+DVI
Sbjct: 57  TVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVI 116

Query: 497 IVLVGNKTDLVDKRQVSIEEAESKAGDLNVMFIETSAKAGFNIKALFRKIAAALPGMETL 318
           IVLVGNKTDLVDKRQVSIEE E+KA DLNVMFIETSAKAGFNIKALFRKIAAALPGMETL
Sbjct: 117 IVLVGNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETL 176

Query: 317 SSTKQEDMVDVNLK-XXXXXXXXXXXSGGCAC 225
           SSTKQEDMVDVNLK            SGGCAC
Sbjct: 177 SSTKQEDMVDVNLKSSNTNASQSQPQSGGCAC 208


>ref|NP_181989.1| Ras-related protein RABH1B [Arabidopsis thaliana]
           gi|297828175|ref|XP_002881970.1| hypothetical protein
           ARALYDRAFT_903887 [Arabidopsis lyrata subsp. lyrata]
           gi|75318653|sp|O80501.1|RAH1B_ARATH RecName:
           Full=Ras-related protein RABH1b; Short=AtRABH1b;
           AltName: Full=Ras-related protein Rab6A; Short=AtRab6A
           gi|3341681|gb|AAC27463.1| putative small GTP-binding
           protein [Arabidopsis thaliana]
           gi|21593488|gb|AAM65455.1| putative small GTP-binding
           protein [Arabidopsis thaliana]
           gi|107738267|gb|ABF83670.1| At2g44610 [Arabidopsis
           thaliana] gi|110742258|dbj|BAE99055.1| putative small
           GTP-binding protein [Arabidopsis thaliana]
           gi|297327809|gb|EFH58229.1| hypothetical protein
           ARALYDRAFT_903887 [Arabidopsis lyrata subsp. lyrata]
           gi|330255353|gb|AEC10447.1| Ras-related protein RABH1B
           [Arabidopsis thaliana] gi|741994|prf||2008312A
           GTP-binding protein
          Length = 208

 Score =  248 bits (633), Expect = 8e-64
 Identities = 131/152 (86%), Positives = 138/152 (90%), Gaps = 1/152 (0%)
 Frame = -2

Query: 677 TVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTVKWIEEVRSERGNDVI 498
           TVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNT KWI+EVR+ERG+DVI
Sbjct: 57  TVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVI 116

Query: 497 IVLVGNKTDLVDKRQVSIEEAESKAGDLNVMFIETSAKAGFNIKALFRKIAAALPGMETL 318
           +VLVGNKTDLVDKRQVSIEEAE+KA +LNVMFIETSAKAGFNIKALFRKIAAALPGMETL
Sbjct: 117 VVLVGNKTDLVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETL 176

Query: 317 SSTKQEDMVDVNLK-XXXXXXXXXXXSGGCAC 225
           SSTKQEDMVDVNLK            SGGC+C
Sbjct: 177 SSTKQEDMVDVNLKSSNANASLAQQQSGGCSC 208


>ref|XP_002302484.1| predicted protein [Populus trichocarpa] gi|222844210|gb|EEE81757.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  248 bits (633), Expect = 8e-64
 Identities = 133/152 (87%), Positives = 137/152 (90%), Gaps = 1/152 (0%)
 Frame = -2

Query: 677 TVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTVKWIEEVRSERGNDVI 498
           TVRLQLWDTAGQERFRSLIPSYIRDSSVAVIV+DVASRQSFLNT KWIEEVRSERG+DVI
Sbjct: 57  TVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRSERGSDVI 116

Query: 497 IVLVGNKTDLVDKRQVSIEEAESKAGDLNVMFIETSAKAGFNIKALFRKIAAALPGMETL 318
           IVLVGNKTDLVDKRQVSIEE E+KA DLNVMFIETSAKAGFNIKALFRKIAAALPGMETL
Sbjct: 117 IVLVGNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETL 176

Query: 317 SSTKQEDMVDVNLK-XXXXXXXXXXXSGGCAC 225
           SS+KQEDMVDVNLK            SGGCAC
Sbjct: 177 SSSKQEDMVDVNLKSSNANASQSQQQSGGCAC 208


>emb|CBI16724.3| unnamed protein product [Vitis vinifera]
          Length = 179

 Score =  248 bits (632), Expect = 1e-63
 Identities = 131/152 (86%), Positives = 136/152 (89%), Gaps = 1/152 (0%)
 Frame = -2

Query: 677 TVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTVKWIEEVRSERGNDVI 498
           TVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNT KWIEEVR+ERG+DVI
Sbjct: 28  TVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTAKWIEEVRTERGSDVI 87

Query: 497 IVLVGNKTDLVDKRQVSIEEAESKAGDLNVMFIETSAKAGFNIKALFRKIAAALPGMETL 318
           IVLVGNKTDLVDKRQVSIEE E+KA DLNVMFIETSAKAGFNIKALFRKIAAALPGMETL
Sbjct: 88  IVLVGNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETL 147

Query: 317 SSTKQEDMVDVNLK-XXXXXXXXXXXSGGCAC 225
           SS KQEDMVDVNLK            +GGC+C
Sbjct: 148 SSAKQEDMVDVNLKSSNTNASQSQPQAGGCSC 179


>ref|XP_002266653.1| PREDICTED: ras-related protein RABH1b [Vitis vinifera]
          Length = 208

 Score =  248 bits (632), Expect = 1e-63
 Identities = 131/152 (86%), Positives = 136/152 (89%), Gaps = 1/152 (0%)
 Frame = -2

Query: 677 TVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTVKWIEEVRSERGNDVI 498
           TVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNT KWIEEVR+ERG+DVI
Sbjct: 57  TVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTAKWIEEVRTERGSDVI 116

Query: 497 IVLVGNKTDLVDKRQVSIEEAESKAGDLNVMFIETSAKAGFNIKALFRKIAAALPGMETL 318
           IVLVGNKTDLVDKRQVSIEE E+KA DLNVMFIETSAKAGFNIKALFRKIAAALPGMETL
Sbjct: 117 IVLVGNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETL 176

Query: 317 SSTKQEDMVDVNLK-XXXXXXXXXXXSGGCAC 225
           SS KQEDMVDVNLK            +GGC+C
Sbjct: 177 SSAKQEDMVDVNLKSSNTNASQSQPQAGGCSC 208


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