BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005289
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326026.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_002876469.1| pentatricopeptide repeat-containing protein ...   113   2e-23
ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containi...   112   2e-23
ref|XP_003526239.1| PREDICTED: pentatricopeptide repeat-containi...   111   5e-23
emb|CAN82291.1| hypothetical protein VITISV_021279 [Vitis vinifera]   111   5e-23

>ref|XP_002326026.1| predicted protein [Populus trichocarpa] gi|222862901|gb|EEF00408.1|
           predicted protein [Populus trichocarpa]
          Length = 737

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/127 (43%), Positives = 81/127 (63%)
 Frame = +2

Query: 86  LVGLLPYCSILESVKATETIHTLTVTMGSNSAQSIFLNNNIMSLYASMGFIGHVGRMFDA 265
           L+ LL  CS L ++  T+ +H LT+T+G N  QS F+ NNI+S YAS   +    ++FD 
Sbjct: 14  LLQLLQSCSKLRALDTTKPLHALTITIGPNPEQSTFVYNNIISFYASFNQVPMAHKVFDN 73

Query: 266 MPERNTVSFNTVIGCYSRHGFVEEAWSVLYKMMSFKFVPTQFTVGALLSSACLENWRGMY 445
           MP RN VS+N++I C+S++G++EEAW    +M+   F P  FT+  LLS A ++  RG+ 
Sbjct: 74  MPHRNKVSYNSIISCFSKYGYLEEAWRTFCEMIDCGFRPNNFTLSGLLSCASMDVGRGIM 133

Query: 446 LHGLVIK 466
           L  L IK
Sbjct: 134 LQALAIK 140


>ref|XP_002876469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322307|gb|EFH52728.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 741

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/127 (44%), Positives = 80/127 (62%)
 Frame = +2

Query: 86  LVGLLPYCSILESVKATETIHTLTVTMGSNSAQSIFLNNNIMSLYASMGFIGHVGRMFDA 265
           LV LL  C    S   T+ +H L++T+ S   Q ++++NNI+ LY  +G +   G++FD 
Sbjct: 15  LVSLLNVCRKAPSFARTKALHALSITLCSVILQPVYISNNIICLYEKLGEVSLAGKVFDQ 74

Query: 266 MPERNTVSFNTVIGCYSRHGFVEEAWSVLYKMMSFKFVPTQFTVGALLSSACLENWRGMY 445
           MPERN VSFNT+I  YS++G  E+AW VL +M  F ++P Q TV  LLS A L+   G  
Sbjct: 75  MPERNKVSFNTIINGYSKYGDAEKAWGVLSEMRYFGYLPNQSTVSGLLSCASLDIRAGTQ 134

Query: 446 LHGLVIK 466
           LHGL +K
Sbjct: 135 LHGLSLK 141


>ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g58590-like [Vitis vinifera]
          Length = 921

 Score =  112 bits (281), Expect = 2e-23
 Identities = 58/132 (43%), Positives = 82/132 (62%)
 Frame = +2

Query: 71  LNHETLVGLLPYCSILESVKATETIHTLTVTMGSNSAQSIFLNNNIMSLYASMGFIGHVG 250
           +  + L+ LL  C    ++K T+ +H LTVTM SNS Q IFL NN++SLY   G +    
Sbjct: 49  MQQQRLLLLLQACKKAPTLKETKPLHALTVTMASNSTQPIFLYNNLISLYVLQGELSTAR 108

Query: 251 RMFDAMPERNTVSFNTVIGCYSRHGFVEEAWSVLYKMMSFKFVPTQFTVGALLSSACLEN 430
           ++F  M +RN VS+NT+IG YSR+G VEEAW++  +M  + F PTQ T   LLS A L+ 
Sbjct: 109 KVFGEMTQRNVVSYNTIIGGYSRNGSVEEAWNLFSEMRRYGFEPTQHTFAGLLSCASLKL 168

Query: 431 WRGMYLHGLVIK 466
            +G  L   ++K
Sbjct: 169 SQGFQLQAQMVK 180


>ref|XP_003526239.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g58590-like [Glycine max]
          Length = 732

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/135 (41%), Positives = 86/135 (63%)
 Frame = +2

Query: 62  NGELNHETLVGLLPYCSILESVKATETIHTLTVTMGSNSAQSIFLNNNIMSLYASMGFIG 241
           +G  + + L+ LL  C  L S+ AT+ +H L++TMG    QSIF++NNI+S Y ++G + 
Sbjct: 6   HGFRHGQLLLNLLEACCTLRSLDATKCLHALSITMGHIPKQSIFIHNNIISSYIALGEVL 65

Query: 242 HVGRMFDAMPERNTVSFNTVIGCYSRHGFVEEAWSVLYKMMSFKFVPTQFTVGALLSSAC 421
           +  ++FDA+P R  VS+NT+I  Y R G V++AW++L  M    F PTQ+T+  LLS   
Sbjct: 66  NARKLFDALPHRTVVSYNTLITAYCRRGNVDDAWNLLCHMRGSGFAPTQYTLTGLLSCEL 125

Query: 422 LENWRGMYLHGLVIK 466
           L + RG+ L  L I+
Sbjct: 126 LNHSRGVQLQALSIR 140


>emb|CAN82291.1| hypothetical protein VITISV_021279 [Vitis vinifera]
          Length = 954

 Score =  111 bits (278), Expect = 5e-23
 Identities = 57/132 (43%), Positives = 81/132 (61%)
 Frame = +2

Query: 71  LNHETLVGLLPYCSILESVKATETIHTLTVTMGSNSAQSIFLNNNIMSLYASMGFIGHVG 250
           +  + L+ LL  C    ++K T+ +H LTVTM SNS Q IFL NN++SLY   G +    
Sbjct: 49  MQQQRLLLLLQACKTAPTLKETKPLHALTVTMASNSTQPIFLYNNLISLYVLQGELSTAR 108

Query: 251 RMFDAMPERNTVSFNTVIGCYSRHGFVEEAWSVLYKMMSFKFVPTQFTVGALLSSACLEN 430
            +F  M +RN VS+NT+IG YSR+G VEEAW++  ++  + F PTQ T   LLS A L+ 
Sbjct: 109 EVFGEMTQRNVVSYNTIIGGYSRNGSVEEAWNLFSELRRYGFEPTQHTFAGLLSCASLKL 168

Query: 431 WRGMYLHGLVIK 466
            +G  L   ++K
Sbjct: 169 SQGFQLQAQMVK 180