BLASTX nr result

ID: Bupleurum21_contig00005283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005283
         (1223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABV27490.1| fasciclin-like arabinogalactan protein 19 [Gossyp...   347   1e-99
gb|ACL36352.1| fascilin-like arabinogalactan protein [Gossypium ...   342   3e-98
ref|XP_002320524.1| fasciclin-like arabinogalactan protein [Popu...   337   8e-97
emb|CBI28444.3| unnamed protein product [Vitis vinifera]              334   4e-95
ref|XP_002522745.1| conserved hypothetical protein [Ricinus comm...   332   6e-95

>gb|ABV27490.1| fasciclin-like arabinogalactan protein 19 [Gossypium hirsutum]
          Length = 398

 Score =  347 bits (890), Expect(2) = 1e-99
 Identities = 170/269 (63%), Positives = 217/269 (80%), Gaps = 1/269 (0%)
 Frame = +3

Query: 123 TIILSILLVLLFATASTAHNITRILAQHPEFSTFNHYLTITHLAADINRRLTITVCAVDN 302
           T  L +LL+LLF+T S AHNITRILA+HPEFSTFNHYLT+THLA++INRR TITV A++N
Sbjct: 5   TTALFLLLLLLFST-SNAHNITRILAKHPEFSTFNHYLTLTHLASEINRRETITVLALNN 63

Query: 303 AGMADLLSKHLSVYTMKNVLSLHVFADYFGAKKLHQISGGTTLTATMFQATGEADGTSGY 482
           A M+ LLSK LS+YT+KNVLSLHV  DYFG+KKLHQI+ GT LT+TMFQA+G A G+SGY
Sbjct: 64  AAMSSLLSKQLSLYTLKNVLSLHVLVDYFGSKKLHQITNGTALTSTMFQASGAAPGSSGY 123

Query: 483 VNITDVKGGRVGFSPEDNSGGLNSYFVKTIEEKPYNISVIQISHIL-XXXXXXXXXXXXX 659
           +NITD+KGG+VGF  E+N G L++ +VK++ E PYNISV+QIS +L              
Sbjct: 124 INITDLKGGKVGFGAENNDGNLDAVYVKSVAEIPYNISVLQISQVLNSAEAEAPTAEPSK 183

Query: 660 LNVTNVMRLKGCKAFADLIVSEKVEDTFVQSVEGGLTVFCPSDDTLEDFMPKFKNLTAAG 839
           LN+T +M  +GCK+FADL++S   + TF ++++GGLTVFCP+D  ++DFMPK+KNLTA+ 
Sbjct: 184 LNLTEIMSKQGCKSFADLLISSGADATFNENIDGGLTVFCPTDPVIKDFMPKYKNLTASK 243

Query: 840 KTALLLYHGVPVYNSMGMLRSNNGLMNTL 926
           K +LLLYHGVPVY SM ML+SNNG+MNTL
Sbjct: 244 KASLLLYHGVPVYQSMQMLKSNNGIMNTL 272



 Score = 43.9 bits (102), Expect(2) = 1e-99
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +1

Query: 1030 SGTLVDEEPLAVYKIDKVLLPRELF 1104
            +GTL DEEPL VYKI+KVLLPREL+
Sbjct: 303  TGTLKDEEPLIVYKINKVLLPRELY 327


>gb|ACL36352.1| fascilin-like arabinogalactan protein [Gossypium hirsutum]
          Length = 397

 Score =  342 bits (878), Expect(2) = 3e-98
 Identities = 168/272 (61%), Positives = 215/272 (79%), Gaps = 1/272 (0%)
 Frame = +3

Query: 114 LRPTIILSILLVLLFATASTAHNITRILAQHPEFSTFNHYLTITHLAADINRRLTITVCA 293
           + P       L+LLF+T S AHNITRILA++PEFSTFNHYLT+THLA++INRR TITV A
Sbjct: 1   MSPATTALFFLLLLFST-SNAHNITRILAKNPEFSTFNHYLTLTHLASEINRRETITVLA 59

Query: 294 VDNAGMADLLSKHLSVYTMKNVLSLHVFADYFGAKKLHQISGGTTLTATMFQATGEADGT 473
           ++NA M+ LLSK LS+YT+KNVLSLHV  DYFG+KKLHQI+ GT LT+TMFQA+G A G+
Sbjct: 60  LNNAAMSSLLSKQLSLYTLKNVLSLHVLVDYFGSKKLHQITNGTALTSTMFQASGAAPGS 119

Query: 474 SGYVNITDVKGGRVGFSPEDNSGGLNSYFVKTIEEKPYNISVIQISHIL-XXXXXXXXXX 650
           SGY+NITD+KGG+VGF  E+N G L++ +VK++ E PYNISV+QIS +L           
Sbjct: 120 SGYINITDLKGGKVGFGAENNDGNLDAVYVKSVAEIPYNISVLQISQVLNSAEAEAPTAE 179

Query: 651 XXXLNVTNVMRLKGCKAFADLIVSEKVEDTFVQSVEGGLTVFCPSDDTLEDFMPKFKNLT 830
              LN+T +M  +GCKAFADL++S   + TF ++++GGLTVFCP+D  ++DFMPK+KNLT
Sbjct: 180 PSKLNLTEIMSKQGCKAFADLLISSGADATFNENIDGGLTVFCPTDPVIKDFMPKYKNLT 239

Query: 831 AAGKTALLLYHGVPVYNSMGMLRSNNGLMNTL 926
           A+ K +LLLYHGVPVY SM ML+SNNG+MNTL
Sbjct: 240 ASKKASLLLYHGVPVYQSMQMLKSNNGIMNTL 271



 Score = 43.9 bits (102), Expect(2) = 3e-98
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +1

Query: 1030 SGTLVDEEPLAVYKIDKVLLPRELF 1104
            +GTL DEEPL VYKI+KVLLPREL+
Sbjct: 302  TGTLKDEEPLIVYKINKVLLPRELY 326


>ref|XP_002320524.1| fasciclin-like arabinogalactan protein [Populus trichocarpa]
           gi|222861297|gb|EEE98839.1| fasciclin-like
           arabinogalactan protein [Populus trichocarpa]
          Length = 344

 Score =  337 bits (865), Expect(2) = 8e-97
 Identities = 164/266 (61%), Positives = 207/266 (77%), Gaps = 1/266 (0%)
 Frame = +3

Query: 132 LSILLVLLFATAST-AHNITRILAQHPEFSTFNHYLTITHLAADINRRLTITVCAVDNAG 308
           L+I LVLL +T +  AHNITRILA+HP+FSTFNHYLT+THLAA+INRR TITV A+DNA 
Sbjct: 1   LAISLVLLASTTTVNAHNITRILAKHPQFSTFNHYLTVTHLAAEINRRQTITVLALDNAA 60

Query: 309 MADLLSKHLSVYTMKNVLSLHVFADYFGAKKLHQISGGTTLTATMFQATGEADGTSGYVN 488
           M+ L+SK LSVYT++NVLSLHV  DYFG +KLHQI+ GT LTATMFQATG A G SGYVN
Sbjct: 61  MSSLISKQLSVYTLRNVLSLHVLVDYFGTRKLHQITNGTELTATMFQATGSAPGASGYVN 120

Query: 489 ITDVKGGRVGFSPEDNSGGLNSYFVKTIEEKPYNISVIQISHILXXXXXXXXXXXXXLNV 668
           ITD+ GG+V F  EDN G LN+ +VK++EE PYNIS++QIS  L             LNV
Sbjct: 121 ITDLNGGKVAFGAEDNDGKLNAVYVKSLEEIPYNISILQISQPLNSAEAEAPTAAPTLNV 180

Query: 669 TNVMRLKGCKAFADLIVSEKVEDTFVQSVEGGLTVFCPSDDTLEDFMPKFKNLTAAGKTA 848
           T ++  +GCKAF+DL+++     TF ++V+GGLTVFCP+D  +  FMPK+KNLTA  K +
Sbjct: 181 TAILSNQGCKAFSDLLIASGAHTTFEENVDGGLTVFCPTDPVINGFMPKYKNLTAPQKVS 240

Query: 849 LLLYHGVPVYNSMGMLRSNNGLMNTL 926
           LLLYHG+P+Y S+ ML+++NG+MNTL
Sbjct: 241 LLLYHGIPIYQSLQMLKTSNGIMNTL 266



 Score = 44.3 bits (103), Expect(2) = 8e-97
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +1

Query: 1030 SGTLVDEEPLAVYKIDKVLLPRELF 1104
            +GT+ DEEPL VYKI+KVLLPRELF
Sbjct: 297  TGTVKDEEPLVVYKINKVLLPRELF 321


>emb|CBI28444.3| unnamed protein product [Vitis vinifera]
          Length = 482

 Score =  334 bits (856), Expect(2) = 4e-95
 Identities = 174/293 (59%), Positives = 218/293 (74%), Gaps = 3/293 (1%)
 Frame = +3

Query: 57  HSHLILDQSPIYLLAGKMQLRP--TIILSILLVLLFATAST-AHNITRILAQHPEFSTFN 227
           H HL     PI++L GKMQ  P  T +L++ + LLF + +T AHNIT ILA++PEFSTF+
Sbjct: 102 HHHL-----PIFILTGKMQHAPVFTRLLTLSVCLLFLSCATHAHNITHILAKYPEFSTFS 156

Query: 228 HYLTITHLAADINRRLTITVCAVDNAGMADLLSKHLSVYTMKNVLSLHVFADYFGAKKLH 407
           HYLT+THLA +INRR TITV AV NAGMADLLSKHLSVY +KNVLSLHV  DYFGA+KLH
Sbjct: 157 HYLTVTHLAGEINRRQTITVLAVSNAGMADLLSKHLSVYVIKNVLSLHVLVDYFGARKLH 216

Query: 408 QISGGTTLTATMFQATGEADGTSGYVNITDVKGGRVGFSPEDNSGGLNSYFVKTIEEKPY 587
           QI+ GT  +AT+FQ+TG A GT+G+VNITD+K G+VGF  +D SG LN+YFVK++ E PY
Sbjct: 217 QITDGTASSATLFQSTGSAPGTAGFVNITDLKHGKVGFGAQD-SGHLNAYFVKSVVEIPY 275

Query: 588 NISVIQISHILXXXXXXXXXXXXXLNVTNVMRLKGCKAFADLIVSEKVEDTFVQSVEGGL 767
           NISV++IS IL                      +GCKAF DL+ +     TF ++ +GGL
Sbjct: 276 NISVLEISQIL-------------------TSAQGCKAFGDLLEASGAIKTFEENADGGL 316

Query: 768 TVFCPSDDTLEDFMPKFKNLTAAGKTALLLYHGVPVYNSMGMLRSNNGLMNTL 926
           TVFCPSDD ++ FMPK+KNLTAAGK +LLLYHG+P+Y SM ML+S+NG+ NTL
Sbjct: 317 TVFCPSDDVIKGFMPKYKNLTAAGKVSLLLYHGIPIYQSMQMLKSSNGVTNTL 369



 Score = 42.0 bits (97), Expect(2) = 4e-95
 Identities = 17/25 (68%), Positives = 24/25 (96%)
 Frame = +1

Query: 1030 SGTLVDEEPLAVYKIDKVLLPRELF 1104
            +GT++D+EP+ +YKI+KVLLPRELF
Sbjct: 400  TGTVLDQEPVVLYKINKVLLPRELF 424


>ref|XP_002522745.1| conserved hypothetical protein [Ricinus communis]
           gi|223537983|gb|EEF39596.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 408

 Score =  332 bits (851), Expect(2) = 6e-95
 Identities = 165/278 (59%), Positives = 208/278 (74%), Gaps = 7/278 (2%)
 Frame = +3

Query: 114 LRPTIILSILLVLLFATAST-----AHNITRILAQHPEFSTFNHYLTITHLAADINRRLT 278
           +R + +LS LL+LL  + ST     AHNITR+L+ HP FSTFNHYLTITHLA +INRR T
Sbjct: 1   MRLSALLSFLLLLLLFSTSTLTLTNAHNITRLLSHHPSFSTFNHYLTITHLADEINRRTT 60

Query: 279 ITVCAVDNAGMADLLSKHLSVYTMKNVLSLHVFADYFGAKKLHQISGGTTLTATMFQATG 458
           ITVCA+DN  M+ LLSKH S+YT+KN+LSLHV  DYFGAKKLHQI+ GT L ATMFQATG
Sbjct: 61  ITVCAIDNTAMSALLSKHPSIYTIKNMLSLHVLLDYFGAKKLHQITNGTALAATMFQATG 120

Query: 459 EADGTSGYVNITDVKGGRVGFSPEDNSGGLNSYFVKTIEEKPYNISVIQISHIL-XXXXX 635
            A G+SG+VNITD+KGG+V F PEDN G L  +FVK++EE PYNIS+IQIS+ L      
Sbjct: 121 SAPGSSGFVNITDIKGGKVAFGPEDNDGNLGVFFVKSLEEVPYNISIIQISNFLPSDVAA 180

Query: 636 XXXXXXXXLNVTNVMRLKGCKAFAD-LIVSEKVEDTFVQSVEGGLTVFCPSDDTLEDFMP 812
                   +N+T++M   GCK FAD L+ + +   T+  +++GGLTVFCP DD  + F+P
Sbjct: 181 APTPEPSRMNLTDMMSAHGCKFFADTLLANPEASSTYQDNIDGGLTVFCPLDDPFKAFLP 240

Query: 813 KFKNLTAAGKTALLLYHGVPVYNSMGMLRSNNGLMNTL 926
           K+KNLTAAGK + L + GVP+Y S+ ML+SNNG+MNTL
Sbjct: 241 KYKNLTAAGKVSFLEFFGVPIYQSLSMLKSNNGVMNTL 278



 Score = 43.5 bits (101), Expect(2) = 6e-95
 Identities = 18/24 (75%), Positives = 23/24 (95%)
 Frame = +1

Query: 1033 GTLVDEEPLAVYKIDKVLLPRELF 1104
            GTL+DE+PLA+Y I+KVLLP+ELF
Sbjct: 310  GTLIDEQPLAIYTINKVLLPKELF 333


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