BLASTX nr result

ID: Bupleurum21_contig00005273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005273
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK19069.1| late elongated hypocotyl homolog [Ipomoea nil]         60   2e-07
ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]       57   2e-06
emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]    57   2e-06

>dbj|BAK19069.1| late elongated hypocotyl homolog [Ipomoea nil]
          Length = 776

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/85 (40%), Positives = 46/85 (54%)
 Frame = -3

Query: 256 VSNNEREVNPPVLAFIDQQVDPKCSRTSPQQWLGVESPPLSVSKSAEGESEKMNTELRTV 77
           V+NNERE   P  +   QQ+DP C+ T  +Q    + P L  S S E +  K+NT +   
Sbjct: 480 VANNEREDGTPDPSLHVQQLDPGCTETLREQLSASKPPVLCSSDSEESDGMKVNTTVTVT 539

Query: 76  DPEQVIAVTKAQDSKKMKDQKLVDR 2
           D EQ   VT+  DS   K++K VDR
Sbjct: 540 DTEQAAIVTELIDSNTTKNRKQVDR 564


>ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]
          Length = 771

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
 Frame = -3

Query: 295 APMISTTGNGKDKVSNNEREVNPPVLAFIDQQVDPKCSRTSPQQWLGVESPPLSVSKSAE 116
           A  +  T  G+   +N ER  N P     DQQ+D +CS     Q    +SP +S S S E
Sbjct: 479 ATSVPPTNTGQAPAANTERRENTPQ----DQQLDLECSEALQAQHSASKSPAMSSSDSEE 534

Query: 115 GESEKMNTELRTVDPEQ-VIAVTKAQDSKKMKDQKLVDR 2
               K NTE    D E+   AVT+  D  KMK +K VDR
Sbjct: 535 SGGAKPNTESTAPDNEKNTTAVTELNDPTKMKSRKQVDR 573


>emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]
          Length = 857

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
 Frame = -3

Query: 295 APMISTTGNGKDKVSNNEREVNPPVLAFIDQQVDPKCSRTSPQQWLGVESPPLSVSKSAE 116
           A  +  T  G+   +N ER  N P     DQQ+D +CS     Q    +SP +S S S E
Sbjct: 565 ATSVPPTNTGQAPAANTERRENTPQ----DQQLDLECSEALQAQHSASKSPAMSSSDSEE 620

Query: 115 GESEKMNTELRTVDPEQ-VIAVTKAQDSKKMKDQKLVDR 2
               K NTE    D E+   AVT+  D  KMK +K VDR
Sbjct: 621 SGGAKPNTESTAPDNEKNTTAVTELNDPTKMKSRKQVDR 659


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